Ggra7726.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7726.t1
Unique NameGgra7726.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length465
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:162719..164113 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005705533.1
Preferred nameHAG1
PFAMsAcetyltransf_1,Bromodomain
Max annot lvl2759|Eukaryota
KEGG koko:K06062
KEGG Pathwayko04330,ko04919,ko05166,ko05203,map04330,map04919,map05166,map05203
GOsGO:0000003,GO:0000123,GO:0000428,GO:0001816,GO:0002682,GO:0002694,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003712,GO:0003713,GO:0003824,GO:0004402,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005671,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006325,GO:0006338,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006473,GO:0006475,GO:0006508,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0007507,GO:0007610,GO:0007611,GO:0007613,GO:0007616,GO:0008080,GO:0008134,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009628,GO:0009653,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009908,GO:0009987,GO:0010015,GO:0010321,GO:0010467,GO:0010468,GO:0010484,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010628,GO:0010639,GO:0010646,GO:0010824,GO:0010826,GO:0010948,GO:0015630,GO:0016043,GO:0016070,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016578,GO:0016579,GO:0016591,GO:0016740,GO:0016746,GO:0016747,GO:0016787,GO:0018130,GO:0018193,GO:0018205,GO:0018335,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019783,GO:0019899,GO:0022414,GO:0022622,GO:0023051,GO:0030880,GO:0030914,GO:0031248,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031647,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032886,GO:0032991,GO:0033043,GO:0033276,GO:0034212,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0036459,GO:0040029,GO:0042826,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043966,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0045580,GO:0045589,GO:0045595,GO:0045619,GO:0045786,GO:0045815,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046599,GO:0046600,GO:0046605,GO:0046606,GO:0048167,GO:0048364,GO:0048367,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048608,GO:0048731,GO:0048736,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050804,GO:0050863,GO:0050865,GO:0050877,GO:0050890,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051239,GO:0051249,GO:0051252,GO:0051254,GO:0051276,GO:0051493,GO:0051494,GO:0051726,GO:0055029,GO:0060173,GO:0060255,GO:0061458,GO:0061695,GO:0061733,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0070461,GO:0070507,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0072359,GO:0080090,GO:0090304,GO:0090567,GO:0090575,GO:0097159,GO:0097659,GO:0099177,GO:0099402,GO:0101005,GO:0106075,GO:0106077,GO:0106078,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902105,GO:1902115,GO:1902116,GO:1902493,GO:1902494,GO:1902562,GO:1902680,GO:1903506,GO:1903508,GO:1903706,GO:1905392,GO:1990234,GO:2000026,GO:2000112,GO:2001141
Evalue1.18e-175
EggNOG OGsCOG5076@1|root,KOG1472@2759|Eukaryota
EC2.3.1.48
Descriptionhistone acetyltransferase activity
COG categoryBK
BRITEko00000,ko00001,ko01000,ko03021,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7726Ggra7726Gracilaria gracilis GNS1m malegenetig00000088_pilon 162719..164113 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7726.t1.stop1Ggra7726.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000088_pilon 162719..162721 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7726.t1.CDS1Ggra7726.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000088_pilon 162719..164113 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7726.t1.exon1Ggra7726.t1.exon1Gracilaria gracilis GNS1m maleexontig00000088_pilon 162719..164113 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7726.t1.start1Ggra7726.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000088_pilon 164111..164113 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7726.t1Ggra7726.t1Gracilaria gracilis GNS1m malepolypeptidetig00000088_pilon 162719..164113 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7726.t1 ID=Ggra7726.t1|Name=Ggra7726.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=465bp
MEVHPPSKKKPRLSHPPASVRALAPKPKHAPNATRIDVAVEMPDSNSGGP
SQVETESVPILDADLASGKPYNIMSIVEVPPCRSPRTPPADAHMHPTADI
LGWDSQHNYIQRWVRMTKEEYNDNVKFQVVKNDSNRENLLLLLGLKNVFV
KQLPNMPRPYVSRLVFDRKHESLALLKKSETGYIVMGGCCYRPFRDQKFA
EIAFLAISHTEQVRGYGTRLMAQTKERAKRIGLTHLLTCADNNAVPYFKK
QGFSKKITLPFERWQGYIKDYDGVTLMECILHPNVDYLNIPMLLKAQKMA
LVEKMKEISNSHVVYRGIDVRGKKGMKIEDIPGLKDVGWKNNNLSTRNGP
TAGFSTRDKTSQEILHKHLQSVLDEIKNHDCAWPFSDPVNAEETGAIDYY
DVIKNPMDLSTMQKRLDDGWFYVTKEIFIADFKRMVNNCKTYNGKGHYVT
EMAVQLEKLFLNKV*
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spliced messenger RNA

>Ggra7726.t1 ID=Ggra7726.t1|Name=Ggra7726.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1395bp|location=Sequence derived from alignment at tig00000088_pilon:162719..164113- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAGTTCACCCTCCTTCCAAAAAGAAGCCAAGGCTCTCTCATCCTCC
TGCTTCTGTGCGTGCCCTTGCGCCGAAGCCGAAACACGCTCCTAATGCAA
CGCGCATAGATGTGGCTGTGGAAATGCCCGACTCGAACTCAGGTGGGCCA
AGTCAAGTCGAGACAGAGTCGGTACCTATCTTGGACGCGGACCTTGCCTC
TGGAAAACCTTATAACATCATGTCAATCGTTGAGGTCCCGCCTTGTCGTT
CTCCTCGCACGCCGCCGGCAGATGCTCATATGCACCCCACTGCTGATATT
CTGGGGTGGGACTCGCAGCACAACTACATTCAGCGCTGGGTGCGGATGAC
GAAGGAAGAGTATAATGATAACGTTAAGTTTCAAGTGGTGAAGAATGATT
CTAACAGAGAGAATCTACTGCTGCTACTTGGGCTTAAGAACGTGTTTGTG
AAGCAACTACCGAACATGCCACGGCCGTATGTTTCTCGCCTTGTTTTTGA
CAGAAAACATGAATCACTTGCGCTCTTAAAAAAGTCGGAAACAGGCTATA
TTGTTATGGGTGGTTGCTGTTATCGCCCGTTTCGCGATCAAAAGTTTGCG
GAGATTGCGTTCCTGGCAATTTCCCACACAGAGCAGGTGCGAGGATACGG
AACACGGCTGATGGCTCAGACGAAAGAGCGGGCTAAACGGATAGGACTGA
CCCACCTACTGACATGTGCAGATAACAATGCGGTGCCTTACTTTAAAAAG
CAAGGGTTCAGCAAGAAGATAACTCTCCCTTTCGAGCGCTGGCAAGGATA
TATCAAAGACTATGACGGTGTAACATTGATGGAGTGCATTTTACATCCAA
ACGTAGACTACCTGAACATTCCAATGTTATTGAAAGCCCAGAAGATGGCG
CTGGTGGAGAAAATGAAGGAGATTTCAAACAGCCATGTTGTTTACCGTGG
CATCGATGTACGGGGGAAGAAGGGAATGAAGATTGAAGATATTCCTGGTC
TTAAAGACGTGGGGTGGAAGAACAATAATTTGTCCACTCGAAATGGTCCT
ACCGCTGGGTTCTCGACACGGGATAAGACGTCTCAGGAGATTCTACATAA
ACATTTGCAATCAGTTCTGGATGAAATAAAAAACCACGATTGTGCTTGGC
CGTTTTCGGATCCGGTCAATGCTGAAGAGACCGGAGCCATTGATTACTAT
GACGTTATCAAGAATCCAATGGATTTGTCGACGATGCAGAAACGACTAGA
CGATGGATGGTTCTATGTTACCAAAGAGATTTTCATTGCCGACTTCAAGC
GAATGGTTAATAACTGCAAGACATACAATGGGAAAGGCCACTACGTCACC
GAGATGGCGGTTCAACTAGAGAAGTTGTTCCTAAATAAAGTGTAA
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protein sequence of Ggra7726.t1

>Ggra7726.t1 ID=Ggra7726.t1|Name=Ggra7726.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=465bp
MEVHPPSKKKPRLSHPPASVRALAPKPKHAPNATRIDVAVEMPDSNSGGP
SQVETESVPILDADLASGKPYNIMSIVEVPPCRSPRTPPADAHMHPTADI
LGWDSQHNYIQRWVRMTKEEYNDNVKFQVVKNDSNRENLLLLLGLKNVFV
KQLPNMPRPYVSRLVFDRKHESLALLKKSETGYIVMGGCCYRPFRDQKFA
EIAFLAISHTEQVRGYGTRLMAQTKERAKRIGLTHLLTCADNNAVPYFKK
QGFSKKITLPFERWQGYIKDYDGVTLMECILHPNVDYLNIPMLLKAQKMA
LVEKMKEISNSHVVYRGIDVRGKKGMKIEDIPGLKDVGWKNNNLSTRNGP
TAGFSTRDKTSQEILHKHLQSVLDEIKNHDCAWPFSDPVNAEETGAIDYY
DVIKNPMDLSTMQKRLDDGWFYVTKEIFIADFKRMVNNCKTYNGKGHYVT
EMAVQLEKLFLNKV*
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mRNA from alignment at tig00000088_pilon:162719..164113-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7726.t1 ID=Ggra7726.t1|Name=Ggra7726.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1395bp|location=Sequence derived from alignment at tig00000088_pilon:162719..164113- (Gracilaria gracilis GNS1m male)
ATGGAAGTTCACCCTCCTTCCAAAAAGAAGCCAAGGCTCTCTCATCCTCC
TGCTTCTGTGCGTGCCCTTGCGCCGAAGCCGAAACACGCTCCTAATGCAA
CGCGCATAGATGTGGCTGTGGAAATGCCCGACTCGAACTCAGGTGGGCCA
AGTCAAGTCGAGACAGAGTCGGTACCTATCTTGGACGCGGACCTTGCCTC
TGGAAAACCTTATAACATCATGTCAATCGTTGAGGTCCCGCCTTGTCGTT
CTCCTCGCACGCCGCCGGCAGATGCTCATATGCACCCCACTGCTGATATT
CTGGGGTGGGACTCGCAGCACAACTACATTCAGCGCTGGGTGCGGATGAC
GAAGGAAGAGTATAATGATAACGTTAAGTTTCAAGTGGTGAAGAATGATT
CTAACAGAGAGAATCTACTGCTGCTACTTGGGCTTAAGAACGTGTTTGTG
AAGCAACTACCGAACATGCCACGGCCGTATGTTTCTCGCCTTGTTTTTGA
CAGAAAACATGAATCACTTGCGCTCTTAAAAAAGTCGGAAACAGGCTATA
TTGTTATGGGTGGTTGCTGTTATCGCCCGTTTCGCGATCAAAAGTTTGCG
GAGATTGCGTTCCTGGCAATTTCCCACACAGAGCAGGTGCGAGGATACGG
AACACGGCTGATGGCTCAGACGAAAGAGCGGGCTAAACGGATAGGACTGA
CCCACCTACTGACATGTGCAGATAACAATGCGGTGCCTTACTTTAAAAAG
CAAGGGTTCAGCAAGAAGATAACTCTCCCTTTCGAGCGCTGGCAAGGATA
TATCAAAGACTATGACGGTGTAACATTGATGGAGTGCATTTTACATCCAA
ACGTAGACTACCTGAACATTCCAATGTTATTGAAAGCCCAGAAGATGGCG
CTGGTGGAGAAAATGAAGGAGATTTCAAACAGCCATGTTGTTTACCGTGG
CATCGATGTACGGGGGAAGAAGGGAATGAAGATTGAAGATATTCCTGGTC
TTAAAGACGTGGGGTGGAAGAACAATAATTTGTCCACTCGAAATGGTCCT
ACCGCTGGGTTCTCGACACGGGATAAGACGTCTCAGGAGATTCTACATAA
ACATTTGCAATCAGTTCTGGATGAAATAAAAAACCACGATTGTGCTTGGC
CGTTTTCGGATCCGGTCAATGCTGAAGAGACCGGAGCCATTGATTACTAT
GACGTTATCAAGAATCCAATGGATTTGTCGACGATGCAGAAACGACTAGA
CGATGGATGGTTCTATGTTACCAAAGAGATTTTCATTGCCGACTTCAAGC
GAATGGTTAATAACTGCAAGACATACAATGGGAAAGGCCACTACGTCACC
GAGATGGCGGTTCAACTAGAGAAGTTGTTCCTAAATAAAGTGTAA
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Coding sequence (CDS) from alignment at tig00000088_pilon:162719..164113-

>Ggra7726.t1 ID=Ggra7726.t1|Name=Ggra7726.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1395bp|location=Sequence derived from alignment at tig00000088_pilon:162719..164113- (Gracilaria gracilis GNS1m male)
ATGGAAGTTCACCCTCCTTCCAAAAAGAAGCCAAGGCTCTCTCATCCTCC
TGCTTCTGTGCGTGCCCTTGCGCCGAAGCCGAAACACGCTCCTAATGCAA
CGCGCATAGATGTGGCTGTGGAAATGCCCGACTCGAACTCAGGTGGGCCA
AGTCAAGTCGAGACAGAGTCGGTACCTATCTTGGACGCGGACCTTGCCTC
TGGAAAACCTTATAACATCATGTCAATCGTTGAGGTCCCGCCTTGTCGTT
CTCCTCGCACGCCGCCGGCAGATGCTCATATGCACCCCACTGCTGATATT
CTGGGGTGGGACTCGCAGCACAACTACATTCAGCGCTGGGTGCGGATGAC
GAAGGAAGAGTATAATGATAACGTTAAGTTTCAAGTGGTGAAGAATGATT
CTAACAGAGAGAATCTACTGCTGCTACTTGGGCTTAAGAACGTGTTTGTG
AAGCAACTACCGAACATGCCACGGCCGTATGTTTCTCGCCTTGTTTTTGA
CAGAAAACATGAATCACTTGCGCTCTTAAAAAAGTCGGAAACAGGCTATA
TTGTTATGGGTGGTTGCTGTTATCGCCCGTTTCGCGATCAAAAGTTTGCG
GAGATTGCGTTCCTGGCAATTTCCCACACAGAGCAGGTGCGAGGATACGG
AACACGGCTGATGGCTCAGACGAAAGAGCGGGCTAAACGGATAGGACTGA
CCCACCTACTGACATGTGCAGATAACAATGCGGTGCCTTACTTTAAAAAG
CAAGGGTTCAGCAAGAAGATAACTCTCCCTTTCGAGCGCTGGCAAGGATA
TATCAAAGACTATGACGGTGTAACATTGATGGAGTGCATTTTACATCCAA
ACGTAGACTACCTGAACATTCCAATGTTATTGAAAGCCCAGAAGATGGCG
CTGGTGGAGAAAATGAAGGAGATTTCAAACAGCCATGTTGTTTACCGTGG
CATCGATGTACGGGGGAAGAAGGGAATGAAGATTGAAGATATTCCTGGTC
TTAAAGACGTGGGGTGGAAGAACAATAATTTGTCCACTCGAAATGGTCCT
ACCGCTGGGTTCTCGACACGGGATAAGACGTCTCAGGAGATTCTACATAA
ACATTTGCAATCAGTTCTGGATGAAATAAAAAACCACGATTGTGCTTGGC
CGTTTTCGGATCCGGTCAATGCTGAAGAGACCGGAGCCATTGATTACTAT
GACGTTATCAAGAATCCAATGGATTTGTCGACGATGCAGAAACGACTAGA
CGATGGATGGTTCTATGTTACCAAAGAGATTTTCATTGCCGACTTCAAGC
GAATGGTTAATAACTGCAAGACATACAATGGGAAAGGCCACTACGTCACC
GAGATGGCGGTTCAACTAGAGAAGTTGTTCCTAAATAAAGTGTAA
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