Ggra7684.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7684.t1
Unique NameGgra7684.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1237
Homology
BLAST of Ggra7684.t1 vs. uniprot
Match: A0A2V3IWV5 (CCR4-NOT transcription complex subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWV5_9FLOR)

HSP 1 Score: 1167 bits (3019), Expect = 0.000e+0
Identity = 742/1247 (59.50%), Postives = 867/1247 (69.53%), Query Frame = 0
Query:    1 MAEEEDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYARDSDASAAARGMNNAVLDGREIRCAIATTKYCDTFVRSAATSSDPTAAHHCGNQNCMYYHSLCTEETLTREEVLARQLGPPPPAHLFLPAVPNGRTTNGTQSIHPRLAAHSVASGLVPASRATARSSAVSSGSVMPQASSVPXXXXXXXTSLPSLPVPSTNASVSSAQNPNSSTGNLTTESSSPQRSVNNDS----QQLQYLNGTPPASPRDTRRPSARLQRSPASREPASTVKYLRSSPASASSKPLPVSXXXXPSSAGWASSQALSTSRSSPRHGQSAAFDDPSSSRPKLRLQPRRSREPSPPPGFEKAANNSASVXXXXXXXDVPVSSVTSDAKANVGTGRDEKVENGTGTTTATPAKCPPPGFGPASVSPQVDVKETKVIDVATAWAQEAASDEVFSVKDKRQRKDFVGQVGRETDPIPKDSPDSRSDLAQVLAKIGGDLGVASEVKRMQNVQS-KGMQARVGRSTPNPIGSNRNKKFAPVGAPARLGSLFGNQATSVGYSASTTPFPSTTADVNLIAPPSTPAYGTAFANTFANAFTQKSLASRVSQIPMASPRRNTSRFMFAQRESAADIPQSMAPRSASFQPRPTSFPVNPPPSTFTLSSSPPERFGRTQAASDVRQEQSLMNDLFHAAKPPKPVMQGASRQNRSRFDFADQGVHLQNPNHPPRSVRMNSNMPPKNVSAMGRGYVNQNNSIASLAQLSTQEKLASIFNSAQMSGEALPPMPTFDAHVDPLANPNVPVIPSKPVALDESHRSFRTTTQTAQVVAREKSRVPPNMMHPRQSSMPPPGFREATPGVSPESTEVEKSSTTSGVAKNEASGGDVSVLK-KESNSLGISVEEPLSSGTDSHEDDRRRTKTQRKREKKARQARETTERSNTAEGKQKNGRSVSSTPAVHPVQVTQPXXXXQPHHPANSTKGV--QQFPSSPSXXXXXXXXXXXXXQQVPRSRGDSEIESLRTSPSKSLPGTKLQKAELVPEKYTEKAQSAGVPKDSQK---EQQVQAANDDSTVVLIPSKLSQDPGKYMSVSELEREVEAARAREAQLRDKLLELQRRIRSYDNVRT 1236
            MAEEE+++PQCPLCLEELD+TDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVY+IGLSLTLAREE IRRADMFGK+GRMLRILVNRSHPFNADAPGGPSISAYVQY RDSDASAA R MNNAV DGREIRCAIATTKYCD+FVR+AAT+SDPTAAH+CGNQNCMYYHSL TEETLTREEVLARQ GPPPPAHLFLPA  NGR  N  QSIHPRLAAHSVASGLVPA R  AR   V+S ++   +S+ P       +SL S+P+PSTN S++ A+NPN+STGNL+++S+SP++ + +++    +                               P S+ KY RS+  S +       XXXX               RSSPRHGQ+  FDD  +SRPKLR  PRRSREPSPPPGFE     S  V       D+PVSS +SD +A+    R + +  GTG   +T A  PPPGFGP  VS   +  +    DVA AWAQEAASD+VFS +DKR R DF+G VGR    IP+D+PDSRS+LAQVLAKIGGDLGV+SE K + +       QA         +G+  + K      PA LGSLFGN AT  G    +TP  +T A VN    P           T+        LA+R S++ ++SPRRNTSRF FAQRE A  IP S  PRSA  Q R T F V P       +SS  E F R  AA+++ ++  LMN+L  +AKP  P++ G SRQNRSRFDFAD        N+  R+V   SN PPKN   + R Y  +N+SIASLAQLSTQEKLASIFNSAQMSGEALPPMP+FDAHVDPLANPN+ VIPSKPVA D+S+R FRT +++A V + +K RV  + +  RQ +MPPPGFREATPG+SPEST V+  STTSGVAK+ ASGG+ S  K KE      SV+E +SSGTDSH+DDRRR K Q+KREKK+RQ R++TER+   E KQKNG+  +S PAV PVQVT  XXXX   H + + K V   Q P S                 V R R    +E +R  PS S P  K ++     E  +EK+ +  V ++SQK   E+Q+  + DDS VVLIPSK+S+DPGKYMSVSELEREVEAARAREAQL+DKLLELQRRIRSYDNVRT
Sbjct:    1 MAEEEEEVPQCPLCLEELDATDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVYIIGLSLTLAREEVIRRADMFGKFGRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVFDGREIRCAIATTKYCDSFVRNAATTSDPTAAHYCGNQNCMYYHSLSTEETLTREEVLARQFGPPPPAHLFLPAPSNGRPINAQQSIHPRLAAHSVASGLVPAMRPPARPPIVNSSAIPSTSSAAPSIHPP--SSLSSVPIPSTNTSMAVAKNPNNSTGNLSSDSASPRQHMTSETGTNLRPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSS-KYPRSTGTS-TXXXXXXXXXXXXXXXXXXXXXXXXXXRSSPRHGQTT-FDDAPTSRPKLRFHPRRSREPSPPPGFENRVAMSPPVPSKPPGFDIPVSSPSSDIRASASNARPKDLTTGTGNPPSTSALPPPPGFGPVPVSQNTETGQALANDVAAAWAQEAASDKVFSNEDKRSRTDFIGSVGRGNARIPQDNPDSRSELAQVLAKIGGDLGVSSEFKSLHSSSFFTSEQANRNPFLSGSVGNGGSGKMMHPATPAHLGSLFGNHATGRGCPVPSTPTTTTNAPVNPNGSPQXXXXXXXXXXTYR-------LANRKSELKLSSPRRNTSRFGFAQREIANAIPGSRVPRSA-LQARSTPFQVGP------QTSSASEMFVRPPAANELHKQPMLMNELLQSAKPTNPLVHGPSRQNRSRFDFADHRSPPLTANYRTRAVPTTSNPPPKNSPPVPRSYATRNDSIASLAQLSTQEKLASIFNSAQMSGEALPPMPSFDAHVDPLANPNISVIPSKPVAPDQSNRPFRTVSRSANVASEDKPRVT-STLQSRQPTMPPPGFREATPGISPESTTVDSPSTTSGVAKSVASGGETSRRKSKEIAPQVASVDESVSSGTDSHDDDRRRAKAQKKREKKSRQLRDSTERT-YVERKQKNGKGQTSAPAVQPVQVTXXXXXXXXXHTSQTGKTVLSAQQPHSTQTVQAKVTKPP----NVERQRVSQAVEPVR--PSTSKPANKSKRDN---ELVSEKSGNVAVAENSQKTASEKQIHRSADDSAVVLIPSKMSEDPGKYMSVSELEREVEAARAREAQLQDKLLELQRRIRSYDNVRT 1217          
BLAST of Ggra7684.t1 vs. uniprot
Match: R7Q8C7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8C7_CHOCR)

HSP 1 Score: 618 bits (1593), Expect = 3.670e-198
Identity = 528/1305 (40.46%), Postives = 679/1305 (52.03%), Query Frame = 0
Query:    1 MAEEEDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYARDSDASAAARGMNNAVLDGREIRCAIATTKYCDTFVRSAATSSDPTAAHHCGNQNCMYYHSLCTEE-TLTREEVLARQLGPPPPAHLFLPAVPNGRTTNGTQSIH----PR-LAAHSVASGLVPASRATARSSAVSSGSVMPQASSVPXXXXXXXTSLPSLPVPSTNASVSSAQNPNSST------------------------------GNLTTESSSPQRSVNNDSQQLQYLNGTPPASPRDTRRPSARLQRS----------------------PASREPASTVKYLRSSPASASSKPL---PVSXXXXPSSAGWASSQALSTSRSSPRHGQSAAFDDPSSSRPKLRLQPRRSREPSPPPGFEKAANNSASVXXXXXXXDVPVSSVTSDAKANVGTGRDEKVENGTGTTTATPAKCPPPGFGPASVSPQVD-VKETKVIDVATAWAQEAASDEVFSVKDKRQRKDFVGQVGRETDPIPKDSPDSRSDLAQVLAKIGGDLGVASEVKRMQNVQSKGMQARVGRSTPNPIGSNRNKKF----APVGAPARLGSLFGNQATSVGYSASTTPFPSTTADVNLIAPPSTPAYGTAFANTFANAFTQKSLASRVSQIPMASPRRNTSRFMFAQRESAADIPQSMAPRSASFQPRPTSFPVNPPPSTFTLSSSPPERFGRTQAASDVRQEQSL--MNDLFHAAKPPKPVMQGASRQNRSRFDFADQGVHLQNPNHPPRSVRMNSNMPPKNVSAMGRGYVNQNNSIASLAQLSTQEKLASIFNSAQMSGEALPPMPTFDAHVDPLANPNVPVIPSKPVALDESHRSFRTTTQTAQVVAREKSRVPPNMMHPRQSSMPPPGFREATPGVSPESTEVEKSSTTSGVAKNEASGGDVSVLKKESNSLG-ISVEEPLSSGTDSHEDDRRRTKTQRKREKKARQARETTERSNTAEGKQKNGRSVSSTPAVHPVQVTQPXXXXQPHHPANSTKGVQQFPSSPSXXXXXXXXXXXXXQQVPRSRGDSEIESLRTSPSKSLPGTKLQKAELVPEKYTEKAQSAGVPKDSQKEQQVQAANDDSTVVLIPSKLSQDPGKYMSVSELEREVEAARAREAQLRDKLLELQRRIRSYDNVRT 1236
            M EEE+++P CPLCLEELDSTDRAV+ACQCGYQ+CLWCLHHIREQL++RCPACRTPY+EQNFK+A+VNPE+AAKEAKERATAKK XXXXXXXXXXXXXXXXA AVS  KAKSN KHARILQ+NLVYVIGLSLTLAREE IRRADMFGK+GRM+RILVNRSHPFNADAPGGPSISAY+QY RDSDASAA RGMNN V DGREIRCAIATTKYCD F R+AA +SD  A  HCGNQ CMYYHS+   +  LTREEVLARQLGPPPPAHLF P   + R  +     H    P+ +  H   +  VP S     SSA    S+M +    P       ++ PS+P P                                              GN+T       R V           G PP     TR                               P S   AS+ +   +  A+AS+ P      S    PS+AGWAS  + ++SRS PR G S + D+ + S P+    PRR    + PPGFE AA++S S     XXX        S +      G  E     +G T+      PP GFGP +VS + +  +ET   +VA AW+QEA +DEVF+ +D+R R+  VG+ G+     P+ + DS   LAQ+LAK G + GV++E           +Q++ G    +    +RN ++    AP+ +   LGSLFG   +S G        P +  D  + +P S+ +Y +AF+       T K       Q   A+ RRN+SRF FA+R     + +S  P + S         ++ P      S +   + G +      R E +   MN  F            A +Q RSRF FA+Q    ++ +  PR   ++S    + +S+   G           A LST EKLAS+F+ A+ SGE LPPMPT +  VD LA+ +  + P+        +R        A V    + R    +   R +   PPGFREATP +SPE+T V+  +TT+GVA   ASGG     +  S +L  +  ++ +SSGT+S E+DR+R++ QRKR+KKARQ RE  ER                 P+  PVQ T           +   K  Q+  +S S                 ++    +I S  T PSK L                                               ++L+ DP ++MSVSELEREVEAARAREAQL+D+L ELQRRIR+YDNVRT
Sbjct:    1 MDEEEEEIPTCPLCLEELDSTDRAVKACQCGYQVCLWCLHHIREQLSARCPACRTPYEEQNFKFAEVNPEQAAKEAKERATAKKEXXXXXXXXXXXXXXXXAVAVSQLKAKSNFKHARILQRNLVYVIGLSLTLAREEVIRRADMFGKFGRMMRILVNRSHPFNADAPGGPSISAYIQYYRDSDASAAVRGMNNGVFDGREIRCAIATTKYCDVFARNAA-ASDQNAMFHCGNQFCMYYHSIAPADLVLTREEVLARQLGPPPPAHLFFPD--SRRPNHAPLPFHRPGPPQPIPIHPPPNTGVPLST----SSASQGRSMMTR----PPASMPSPSTAPSIPFPQHGQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNVTAG-----RKV-----------GGPPQPFSPTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPLSSAGASSARGNGTRSATASAAPFFSPRSSRAQLPSNAGWASGHSRNSSRSPPRRGPSTSLDESALSTPRT---PRRLPRDNAPPGFESAASSSTSAAPSRXXXXXXXXXPQSSS------GNREGAVTKSGLTSGAHISAPP-GFGPTAVSSRGNGSEETDRNNVAAAWSQEATTDEVFATQDRRPRRP-VGKPGQRAGLGPQSATDSVPALAQLLAKRGKETGVSAE-----------LQSKTGPLEISDASESRNGQYNLADAPLVSQPPLGSLFGK--SSQGGKV-----PPSDVDRRVKSPESS-SYTSAFSVPLGRTETSK------LQESAAAARRNSSRFDFARRSVPESLSESTHPSTQS---------MSIPSLERGASKTTFGKVGGSAVPKSSRDEYAFAEMNPNFVQGSSAVTSTSHALKQARSRFGFAEQTSSPKSNHTRPRPEGLDSTANGEGLSSGFDG---------PFANLSTAEKLASLFHRAEWSGERLPPMPTHEPQVDQLASADQVLDPNT-----SHNRPVTALPIPAAVPDHGEIRKNSPVSRSRPTQYAPPGFREATPDISPETTAVDNKTTTAGVATKVASGGST---RNASEALSPVRTDDTVSSGTESIEEDRKRSRAQRKRDKKARQLREAAERKALE----------VLPPSTVPVQSTDA---------STKLKDQQRLAASVSGLREM------------KNTSPGQIISQATEPSKHLK---------------------------------------------QARLTDDPSRFMSVSELEREVEAARAREAQLQDRLQELQRRIRNYDNVRT 1140          
BLAST of Ggra7684.t1 vs. uniprot
Match: A0A1X6P7L2 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7L2_PORUM)

HSP 1 Score: 327 bits (839), Expect = 1.860e-90
Identity = 172/265 (64.91%), Postives = 206/265 (77.74%), Query Frame = 0
Query:    5 EDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYARDSDASAAARGMNNAVLDGREIRCAIATTKYCDTFVRSAATSSDPTAAHHCGNQNCMYYHSLCT--EETLTREEVLARQLGPPPPAHLF 267
            ED++PQCPLCLE+LD+TD +V ACQCGY +CL CLHHIREQLN +CPACRTPY E+NF   +V+PE AA+E +ERA AKK        XXXXXXXXX       KAK+ LKH R++Q+NLVYVIGLSL+LAREEA++RA MFG++GR+ R+LVNR HP+NADAPGGPSI+AY+ +ARD+DAS AAR MN  V DGRE+RCAIATTKYCD F+   +        H CGN++C Y H L    E+ LTREEVLARQLGPPPPAHLF
Sbjct:   18 EDEVPQCPLCLEDLDATDLSVRACQCGYPVCLLCLHHIREQLNGKCPACRTPYSEKNFVIDKVDPEAAAREVRERAEAKKAREKRDRAXXXXXXXXXXXXXXXAKAKTTLKHVRVVQRNLVYVIGLSLSLAREEALKRAQMFGRFGRISRVLVNRGHPYNADAPGGPSIAAYILFARDTDASTAARVMNGEVFDGRELRCAIATTKYCDAFIPHGS------GKHLCGNEDCPYLHELAPYPEDVLTREEVLARQLGPPPPAHLF 276          
BLAST of Ggra7684.t1 vs. uniprot
Match: A0A7S1TG26 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TG26_9RHOD)

HSP 1 Score: 308 bits (790), Expect = 9.450e-90
Identity = 170/268 (63.43%), Postives = 208/268 (77.61%), Query Frame = 0
Query:    1 MAEEEDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYARDSDASAAARGMNNAVLDGREIRCAIATTKYCDTFVRSAATSSDPTAAHHCGNQNCMYYHSLC-TEETLTREEVLARQLGPPPPAHLF 267
            +  +ED+ P CPLCLEELD+TD ++ ACQCGYQ+CLWCLHHIREQLN RCPACRTPY+E+ F Y +V+PEEAA+ A++RA    XXXXXXXXXXXXXXXXX        AK NLK ARI+QKNLVY IGLSLTLAREE +RR ++FG++G++  + VNR+HP+N+DAPGGPSISAY+Q++R++DA+ AAR MN  VLDGREIR AIATTKYCD +  S   +       HCGN  C+Y H     ++ LTREEVL+R LGPPPP HLF
Sbjct:    3 LGSDEDEAPSCPLCLEELDATDLSMRACQCGYQVCLWCLHHIREQLNGRCPACRTPYEEEKFVYDEVDPEEAARVARQRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLNLKMARIVQKNLVYAIGLSLTLAREEVLRRPELFGRFGKINLVFVNRNHPYNSDAPGGPSISAYIQFSREADAAMAARHMNGEVLDGREIRTAIATTKYCDAYGSSGCPA-------HCGNPRCLYLHDAAHPDDVLTREEVLSRGLGPPPPPHLF 263          
BLAST of Ggra7684.t1 vs. uniprot
Match: A0A7S3A0I5 (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A0I5_9RHOD)

HSP 1 Score: 285 bits (730), Expect = 8.860e-81
Identity = 162/264 (61.36%), Postives = 206/264 (78.03%), Query Frame = 0
Query:    5 EDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYARDSDASAAARGMNNAVLDGREIRCAIATTKYCDTFVRSAATSSDPTAAHHCGNQNCMYYHSLCT-EETLTREEVLARQLGPPPPAHLF 267
            ++D+P CPLC+EELD+TD AV AC+CGYQICL+CLH IR + NSRCPACRTPY+E+ F+ ++V+ EEAAK A+ERA    XXXXXXXXXXXXXXXXX    + QKA+ NLKHARI+Q+N+VYV GLSL LAREE +RR ++FG++GR+L +LVNR+  +N DAPGGPS++AYVQ+ARD+DAS A R +N  + DGRE++ AIATTKYCD FVR+            CGN +C++ H     E+ LTREEVL+ QLGPPPP +LF
Sbjct:   11 DEDVPSCPLCMEELDATDLAVRACRCGYQICLYCLHTIRAEHNSRCPACRTPYEEEKFEISEVDREEAAKLARERAEXXXXXXXXXXXXXXXXXXXXXXXXTEQKARMNLKHARIVQRNMVYVSGLSLNLAREETLRRNEIFGRFGRILFVLVNRTTAYNPDAPGGPSLTAYVQFARDADASQAVRSLNGDMFDGRELQLAIATTKYCDAFVRTGVPM-------FCGNMSCLHRHEPAPPEDVLTREEVLSNQLGPPPPQNLF 267          
BLAST of Ggra7684.t1 vs. uniprot
Match: A0A7S3A1I5 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A1I5_9RHOD)

HSP 1 Score: 285 bits (730), Expect = 1.820e-77
Identity = 162/264 (61.36%), Postives = 206/264 (78.03%), Query Frame = 0
Query:    5 EDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYARDSDASAAARGMNNAVLDGREIRCAIATTKYCDTFVRSAATSSDPTAAHHCGNQNCMYYHSLCT-EETLTREEVLARQLGPPPPAHLF 267
            ++D+P CPLC+EELD+TD AV AC+CGYQICL+CLH IR + NSRCPACRTPY+E+ F+ ++V+ EEAAK A+ERA    XXXXXXXXXXXXXXXXX    + QKA+ NLKHARI+Q+N+VYV GLSL LAREE +RR ++FG++GR+L +LVNR+  +N DAPGGPS++AYVQ+ARD+DAS A R +N  + DGRE++ AIATTKYCD FVR+            CGN +C++ H     E+ LTREEVL+ QLGPPPP +LF
Sbjct:   11 DEDVPSCPLCMEELDATDLAVRACRCGYQICLYCLHTIRAEHNSRCPACRTPYEEEKFEISEVDREEAAKLARERAEXXXXXXXXXXXXXXXXXXXXXXXXTEQKARMNLKHARIVQRNMVYVSGLSLNLAREETLRRNEIFGRFGRILFVLVNRTTAYNPDAPGGPSLTAYVQFARDADASQAVRSLNGDMFDGRELQLAIATTKYCDAFVRTGVPM-------FCGNMSCLHRHEPAPPEDVLTREEVLSNQLGPPPPQNLF 267          
BLAST of Ggra7684.t1 vs. uniprot
Match: A0A5J4YM21 (CCR4-NOT transcription complex subunit 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YM21_PORPP)

HSP 1 Score: 257 bits (657), Expect = 4.240e-68
Identity = 152/279 (54.48%), Postives = 203/279 (72.76%), Query Frame = 0
Query:    3 EEEDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVN-RSHPFNA--DAPGGPSISAYVQYARDSDASAAARGMNNAVLDGREIRCAIATTKYCDTFVRS-AATSSDPTAAHHCGNQNCMYYHSLCTEETL--TREEVLARQLGPPPPAHLFLPAVPNGR 275
            E+ED +P+CPLCLEELD+TD +++ C CGYQ+CLWCLHHIREQLN +CPACRTPY E+ F  A+++PE+A + A+ERA    XXXXXXXXXXXXXXXXX         K  LK ARIL K+LVYV GLS TLAREE +RR ++FG++G +  +L+N RS    A  + PGGPS+SAY+++ +D+DA+ A R +N  ++DGRE+RCAIATTKYCD+F+ +  A + D      C  +NC+Y H+L   E +  + E++L  QLGPPPP HLF P +P+ +
Sbjct:    6 EDEDGVPECPLCLEELDTTDLSLKPCHCGYQVCLWCLHHIREQLNGKCPACRTPYAEEKFVKAEIDPEDAKRAARERAEXXXXXXXXXXXXXXXXXXXXXXXXXXALPKLILKQARILCKSLVYVNGLSPTLAREEVLRRHELFGRFGTIELVLLNHRSSALRASNNGPGGPSMSAYIKFVKDTDAAHAVRAVNGEIMDGRELRCAIATTKYCDSFIETNCAENGDSGLLVPCELENCLYLHALAEPEIVISSAEDMLVTQLGPPPPGHLF-PRLPSAQ 283          
BLAST of Ggra7684.t1 vs. uniprot
Match: A0A7S0G5F8 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5F8_9RHOD)

HSP 1 Score: 192 bits (489), Expect = 1.450e-49
Identity = 103/186 (55.38%), Postives = 132/186 (70.97%), Query Frame = 0
Query:  108 QKAKSNLKHARILQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYARDSDASAAARGMNNAVLDGREIRCAIATTKYCDTFVRSAATSSDPTAAHHCGNQNCMYYHSLCT-EETLTREEVLARQLGPPPPAHLFL--------PAVPNGRTTNGTQSIH 284
            QKA+ NLKHARI+Q+N+VYVIGLSL LAREE +RR ++FG++GR+L +LVNR+  +N DAPGGPS+SAYVQ+ARDSDAS A R +N  +LDGRE++ AIATTKYCD F+R+            CGN  C++ H     E+ LTREEVL+ QLGPPPP +LF         P + NG  T G++  H
Sbjct:    4 QKARMNLKHARIVQRNMVYVIGLSLNLAREETLRRNEIFGRFGRILFVLVNRATAYNPDAPGGPSLSAYVQFARDSDASQAVRSLNGDILDGRELQLAIATTKYCDAFIRAGVPM-------FCGNLGCLHRHEPAPPEDVLTREEVLSNQLGPPPPQNLFPSSEYVFRGPRI-NGVPTTGSRPAH 181          
BLAST of Ggra7684.t1 vs. uniprot
Match: A0A0L0D3F5 (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D3F5_THETB)

HSP 1 Score: 190 bits (483), Expect = 1.170e-45
Identity = 94/250 (37.60%), Postives = 153/250 (61.20%), Query Frame = 0
Query:    5 EDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYARDSDASAAARGMNNAVLDGREIRCAIATTKYCDTFVRSAATSSDPTAAHHCGNQNCMYYHSLCTE-ETLTREEV 253
            +DD P+CPLC+E+LD TDR    C CGYQIC +C +HI++ ++ +CPACR  Y E+N+K+   +P E  K +K++ + +                          ++ +L++ R++Q+NLVY IGLSL++AREE ++R D FG++GR+ +++VNR + +NA+A  GP++SAY+ Y +  +A  A    + +++DGR IR +  TTKYC  F+RS            C N +CMY H L  E ++ ++E++
Sbjct:    3 DDDEPECPLCMEQLDVTDRNFRPCPCGYQICRFCFNHIKDNMSGQCPACRQVYDEKNYKFTPPDPSEIKKASKKKGSKRVRKSDSGG------------------SRKHLQNVRVIQRNLVYAIGLSLSVAREETLKRHDFFGQFGRIHKVVVNRHNLYNANAAQGPTVSAYITYTQPDEAMRAIAATDGSLVDGRPIRASFGTTKYCSYFLRSV----------QCNNPDCMYLHELGDERDSFSKEDL 224          
BLAST of Ggra7684.t1 vs. uniprot
Match: A0A6B2KYD3 (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYD3_9EUKA)

HSP 1 Score: 184 bits (466), Expect = 4.330e-44
Identity = 100/252 (39.68%), Postives = 153/252 (60.71%), Query Frame = 0
Query:    8 MPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEA-----AKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYARDSDASAAARGMNNAVLDGREIRCAIATTKYCDTFVRSAATSSDPTAAHHCGNQNCMYYHSLCTE-ETLTREEV 253
            M +CP+CL+ELD TDR+ + C+CGYQ+C +C +HI E LN +CPACR PY+ +N+K+   NPEE      AK+A+ER                      A A     A+ NL + R++Q+NLVY+  L+LT A EE ++R + FGK+G++ +I+VNRS+ +    P G S+SAY+ Y ++ DA AA + ++ ++LDGR +R +  TTKYC  F+R+            C N +CMY H L  + ++ T+E++
Sbjct:    1 MVECPICLDELDLTDRSFKPCKCGYQMCRFCWNHINENLNGKCPACRQPYKTENYKFNPPNPEEIQRIQNAKKARERERK------------------HAEA----NARKNLANVRVIQRNLVYLTNLALTAATEEILKRPEYFGKFGKIKKIVVNRSNVYQG--PQGSSVSAYITYFKNKDAHAAIKAVDGSLLDGRLLRASFGTTKYCSYFLRNV----------RCPNPDCMYLHELGNDVDSFTKEDM 218          
The following BLAST results are available for this feature:
BLAST of Ggra7684.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWV50.000e+059.50CCR4-NOT transcription complex subunit 4 n=1 Tax=G... [more]
R7Q8C73.670e-19840.46Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P7L21.860e-9064.91Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TG269.450e-9063.43Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3A0I58.860e-8161.36Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
A0A7S3A1I51.820e-7761.36Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YM214.240e-6854.48CCR4-NOT transcription complex subunit 4 n=1 Tax=P... [more]
A0A7S0G5F81.450e-4955.38Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A0L0D3F51.170e-4537.60Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A6B2KYD34.330e-4439.68Uncharacterized protein n=1 Tax=Arcella intermedia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..101
NoneNo IPR availableCOILSCoilCoilcoord: 1200..1234
NoneNo IPR availablePFAMPF14570zf-RING_4coord: 11..58
e-value: 9.3E-19
score: 66.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 931..945
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..461
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 773..794
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 931..1180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1059..1113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1042..1058
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1162..1180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 978..995
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1003..1020
NoneNo IPR availablePANTHERPTHR12603:SF0CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4coord: 6..953
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 7..67
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 124..205
e-value: 2.1E-7
score: 40.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..75
e-value: 2.1E-23
score: 83.5
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 124..205
e-value: 8.2E-19
score: 69.2
IPR039780CCR4-NOT transcription complex subunit 4PANTHERPTHR12603CCR4-NOT TRANSCRIPTION COMPLEX RELATEDcoord: 6..953
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 11..54
score: 10.92546
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 123..209
score: 9.848526
IPR039515NOT4, modified RING finger, HC subclass (C4C4-type)CDDcd16618mRING-HC-C4C4_CNOT4coord: 11..55
e-value: 4.3259E-27
score: 102.308
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 124..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:56847..60557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7684.t1Ggra7684.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 56847..60557 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7684.t1 ID=Ggra7684.t1|Name=Ggra7684.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1237bp
MAEEEDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRC
PACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKERERREKMKEIEKERA
RAAAVSLQKAKSNLKHARILQKNLVYVIGLSLTLAREEAIRRADMFGKYG
RMLRILVNRSHPFNADAPGGPSISAYVQYARDSDASAAARGMNNAVLDGR
EIRCAIATTKYCDTFVRSAATSSDPTAAHHCGNQNCMYYHSLCTEETLTR
EEVLARQLGPPPPAHLFLPAVPNGRTTNGTQSIHPRLAAHSVASGLVPAS
RATARSSAVSSGSVMPQASSVPSSAHPPSTSLPSLPVPSTNASVSSAQNP
NSSTGNLTTESSSPQRSVNNDSQQLQYLNGTPPASPRDTRRPSARLQRSP
ASREPASTVKYLRSSPASASSKPLPVSSIPLPSSAGWASSQALSTSRSSP
RHGQSAAFDDPSSSRPKLRLQPRRSREPSPPPGFEKAANNSASVPSKPPG
FDVPVSSVTSDAKANVGTGRDEKVENGTGTTTATPAKCPPPGFGPASVSP
QVDVKETKVIDVATAWAQEAASDEVFSVKDKRQRKDFVGQVGRETDPIPK
DSPDSRSDLAQVLAKIGGDLGVASEVKRMQNVQSKGMQARVGRSTPNPIG
SNRNKKFAPVGAPARLGSLFGNQATSVGYSASTTPFPSTTADVNLIAPPS
TPAYGTAFANTFANAFTQKSLASRVSQIPMASPRRNTSRFMFAQRESAAD
IPQSMAPRSASFQPRPTSFPVNPPPSTFTLSSSPPERFGRTQAASDVRQE
QSLMNDLFHAAKPPKPVMQGASRQNRSRFDFADQGVHLQNPNHPPRSVRM
NSNMPPKNVSAMGRGYVNQNNSIASLAQLSTQEKLASIFNSAQMSGEALP
PMPTFDAHVDPLANPNVPVIPSKPVALDESHRSFRTTTQTAQVVAREKSR
VPPNMMHPRQSSMPPPGFREATPGVSPESTEVEKSSTTSGVAKNEASGGD
VSVLKKESNSLGISVEEPLSSGTDSHEDDRRRTKTQRKREKKARQARETT
ERSNTAEGKQKNGRSVSSTPAVHPVQVTQPVKVTQPHHPANSTKGVQQFP
SSPSVQPAQPVKVTKPVQQVPRSRGDSEIESLRTSPSKSLPGTKLQKAEL
VPEKYTEKAQSAGVPKDSQKEQQVQAANDDSTVVLIPSKLSQDPGKYMSV
SELEREVEAARAREAQLRDKLLELQRRIRSYDNVRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003954RRM_dom_euk
IPR013083Znf_RING/FYVE/PHD
IPR012677Nucleotide-bd_a/b_plait_sf
IPR039780Mot2
IPR001841Znf_RING
IPR000504RRM_dom
IPR039515NOT4_mRING-HC-C4C4
IPR035979RBD_domain_sf