Ggra5310.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5310.t1
Unique NameGgra5310.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length236
Homology
BLAST of Ggra5310.t1 vs. uniprot
Match: A0A2V3IV11 (Alpha-protein kinase vwkA n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV11_9FLOR)

HSP 1 Score: 129 bits (324), Expect = 1.320e-32
Identity = 86/216 (39.81%), Postives = 119/216 (55.09%), Query Frame = 0
Query:    1 MADDIDQVRRFSRDLVSSTFDSGSSVRFAIVQYNDPVDGCGFDASVVLPFSSNKGGILEAIDSFPVSCGGDHPEHVCDGILQALNLDWRTCSISSTITMVDASPKDPEPGTGLTEIIIIDIANSVNVGANTDPFIPVRTLDRSEVSLNSTSRQLVTSGDRSRVKVPGAHPLNMIIIGSDGSTERSFKNLAEGNATSGKLFKASGSSNIVEILTEAI 216
            M+DDI  V   + D++++  D+ +  R A+VQYNDP       A VV  FSS+K  I  AI+S   S GGD PEHV  G+  AL L WR  +  + I M DA PKDPEPGTGLT+  I+ +ANSV V  ++ P   VR L   E  +      +V       V   G  PL MI  G   +T+ SF  L+  + T+G +F A+ +S +V+ L +A+
Sbjct:    1 MSDDIAAVNASANDIINNLDDNSADYRVAVVQYNDP------SAGVVSSFSSDKSTITGAINSLRASGGGDTPEHVYSGLELALKLPWRPEATRTIIMMGDAPPKDPEPGTGLTQAKIVALANSVYVSVDSSP--AVRQLLSLEKPVERMPATIVN------VVFTGYVPLLMIPTGGSAATKSSFSALS--SMTNGTVFAAASASEVVDALKKAV 200          
BLAST of Ggra5310.t1 vs. uniprot
Match: A0A4P6UDC3 (VWA domain-containing protein n=1 Tax=Rhodococcus sp. ABRD24 TaxID=2507582 RepID=A0A4P6UDC3_9NOCA)

HSP 1 Score: 74.7 bits (182), Expect = 8.060e-12
Identity = 42/121 (34.71%), Postives = 61/121 (50.41%), Query Frame = 0
Query:    5 IDQVRRFSRDLVSSTFDSGSSVRFAIVQYNDPVDGCGFDASVVLPFSSNKGGILEAIDSFPVSCGGDHPEHVCDGILQALNLDWRTCSISSTITMVDASPKDPEPGTGLTEIIIIDIANSV 125
            I+ VR  + D+ +    +    R ++V++ D   G  F A  V+P +S+       ++S     GGD PE V  GI++AL   W   S  S I + DA P DPEP TGLT   + D+ N V
Sbjct:  280 INNVRSQAADIANRIVSADGRSRVSLVEFRD--HGDAFVARTVVPLTSDFSAFNTGLNSLTAYGGGDTPEAVYSGIVEALRAQWHNDSRRSVILLGDAPPHDPEPATGLTSATVTDMLNGV 398          
BLAST of Ggra5310.t1 vs. uniprot
Match: VWA domain-containing protein n=1 Tax=Rhodococcus TaxID=1827 RepID=UPI0018D30EBA (VWA domain-containing protein n=1 Tax=Rhodococcus TaxID=1827 RepID=UPI0018D30EBA)

HSP 1 Score: 68.2 bits (165), Expect = 1.400e-9
Identity = 41/121 (33.88%), Postives = 61/121 (50.41%), Query Frame = 0
Query:    5 IDQVRRFSRDLVSSTFDSGSSVRFAIVQYNDPVDGCGFDASVVLPFSSNKGGILEAIDSFPVSCGGDHPEHVCDGILQALNLDWRTCSISSTITMVDASPKDPEPGTGLTEIIIIDIANSV 125
            I+ VR  +  + +    +    R ++V+Y D   G  F A  V+P +SN       ++S   + GGD PE V  GI++AL   W+     S I + DA P DPEP TGLT  ++  + N V
Sbjct:  350 INNVRAQAGAIANRIVTADGRSRVSLVEYRD--HGDAFVARTVVPLTSNFADFNTGLNSLSANGGGDTPEAVYSGIVEALRSPWQVGGKRSVILIGDAPPHDPEPVTGLTGDMVTKMLNGV 468          
BLAST of Ggra5310.t1 vs. uniprot
Match: A0A7C0XI65 (VWA domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7C0XI65_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 1.700e-9
Identity = 45/146 (30.82%), Postives = 70/146 (47.95%), Query Frame = 0
Query:    1 MADDIDQVRRFSRDLVSSTFDSGSSVRFAIVQYND-PVDGCGFDAS------------VVLPFSSNKGGILEAIDSFPVSCGGDHPEHVCDGILQALNLD----WRTCSISSTITMVDASPKDPEPGTGLTEIIIIDIANSVNVGA 129
            M DDID V+  + ++V+   +     R A+V + D PV   G +               +LPFS++K  I+ AI+S    CG D PE +   +++++N +    WR       I M D+ P DPEP TG T   +   + SV+  A
Sbjct:  162 MWDDIDAVKASATEIVNEISNKVPDWRIAVVDFQDFPVRPYGCEPGDYWNPAGDWPYRAILPFSTDKTAIINAINSLQPLCGWDWPESIYSALIRSINTEGLGEWRKGVKKVVILMTDSYPHDPEPFTGYTMANVKSASESVDPAA 307          
BLAST of Ggra5310.t1 vs. uniprot
Match: A0A7C6HR24 (VWA domain-containing protein n=1 Tax=Intrasporangiaceae bacterium TaxID=2021373 RepID=A0A7C6HR24_9MICO)

HSP 1 Score: 61.2 bits (147), Expect = 3.200e-7
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 0
Query:    5 IDQVRRFSRDLVSSTFDSGSSVRFAIVQYNDPVDGCGFDASVVLPFSSNKGGILEAIDSFPVSCGGDHPEHVCDGILQALNLDWRTCSISSTITMVDASPKDPEPGTGLT 114
            I + R  + DL +    S  + R  +V+Y D   G  F A  V+P + N     + ++      GGD PE V  GI++AL   W   ++ S I + DA   DPE  TG T
Sbjct:  470 ISEARARAADLATKLLRSDPNSRVGLVEYRD--HGDDFVARTVVPLTKNYATFQDGLNRLATGGGGDTPEAVYSGIVEALRAPWDPAAMRSIIVIGDAPAHDPESVTGYT 577          
The following BLAST results are available for this feature:
BLAST of Ggra5310.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IV111.320e-3239.81Alpha-protein kinase vwkA n=2 Tax=Gracilariopsis c... [more]
A0A4P6UDC38.060e-1234.71VWA domain-containing protein n=1 Tax=Rhodococcus ... [more]
VWA domain-containing protein n=1 Tax=Rhodococcus TaxID=1827 RepID=UPI0018D30EBA1.400e-933.88VWA domain-containing protein n=1 Tax=Rhodococcus ... [more]
A0A7C0XI651.700e-930.82VWA domain-containing protein n=1 Tax=Candidatus M... [more]
A0A7C6HR243.200e-732.73VWA domain-containing protein n=1 Tax=Intrasporang... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 1..126
e-value: 3.4E-11
score: 45.4
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 1..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000082_piloncontigtig00000082_pilon:425652..426359 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5310.t1Ggra5310.t1Gracilaria gracilis GNS1m malemRNAtig00000082_pilon 425652..426359 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5310.t1 ID=Ggra5310.t1|Name=Ggra5310.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=236bp
MADDIDQVRRFSRDLVSSTFDSGSSVRFAIVQYNDPVDGCGFDASVVLPF
SSNKGGILEAIDSFPVSCGGDHPEHVCDGILQALNLDWRTCSISSTITMV
DASPKDPEPGTGLTEIIIIDIANSVNVGANTDPFIPVRTLDRSEVSLNST
SRQLVTSGDRSRVKVPGAHPLNMIIIGSDGSTERSFKNLAEGNATSGKLF
KASGSSNIVEILTEAITESIPDPTPVPIITSQKIM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf