Ggra6566.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6566.t1
Unique NameGgra6566.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length449
Homology
BLAST of Ggra6566.t1 vs. uniprot
Match: A0A2V3IEW4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEW4_9FLOR)

HSP 1 Score: 289 bits (739), Expect = 1.920e-92
Identity = 136/225 (60.44%), Postives = 173/225 (76.89%), Query Frame = 0
Query:  187 NEDPDDDDLKQSMRTLVADSRXXXXXXXXXPDNVVEKERQFAREADYE--VTSRGMQNIGDVFRLVMRPMETFVFGRLMKRGQRVGEIMGGVIGKCMKASEPRKKVCLMANSLGAHVLVGLLNRPHLLPYKLHTVFFVQGAIAREYFHEGGRFGHVKEVVAGPVVVSHSEHDLILRNIFGWFHGVAIGFSGTPGGAATKMRAVEALCDNPYSLECGEWNNIDGSE 409
            NEDPDDDDLKQ+MR+LV +SR         PD VVE+E++ +R+   +  V +RG+ NI   F  VMRP ET VFGRLMKRGQRVG +MG V+GK MKA+E R+KVC+MANSLGA VL GLLNRPH LPYK+HT+FFVQGAIA+++FH G ++G+V EVVAGPV+ ++S+ DL+LRNIFGWFHG+AIGF GTP G   +M+ +  + D+PY   C  WNN+DG+E
Sbjct:   34 NEDPDDDDLKQAMRSLVVESRVDDNDDEEDPDTVVEREQEVSRQQGSQEVVENRGLNNI---FTTVMRPFETVVFGRLMKRGQRVGHVMGSVLGKLMKATEDRRKVCVMANSLGAQVLCGLLNRPHQLPYKIHTIFFVQGAIAKDWFHPGAKYGYVHEVVAGPVLCTYSQRDLLLRNIFGWFHGIAIGFDGTPIGQMIRMKHLHEVADDPYGFGCEAWNNVDGTE 255          
BLAST of Ggra6566.t1 vs. uniprot
Match: R7QS28 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS28_CHOCR)

HSP 1 Score: 265 bits (676), Expect = 4.420e-79
Identity = 141/283 (49.82%), Postives = 192/283 (67.84%), Query Frame = 0
Query:  169 GEESDIAHACDAAKRAIDNEDPDDDDLKQSMRTLVADSRXXXXXXXXXPDNVVEKERQFAREADYEVTS--RGMQNIGDVFRLVMRPMETFVFGRLMKRGQRVGEIMGGVIGKCMKAS-EPRKKVCLMANSLGAHVLVGLLNRPHLLPYKLHTVFFVQGAIAREYFHEGGRFGHVKEVVAGPVVVSHSEHDLILRNIFGWFHGVAIGFSGTPGGAATKMRAVEALCDNPYSLECGEWNNIDGSEFINEGSPVAGGHGDFKEDETTSLYWSAIKMELGDPSYDI 448
            GEE+DIA A  AAK+AI++++PDD+DL   ++ L  DSR   XXXXXX  +   K R+   EA  + T     M N+    ++++ P + F FGR M RGQR G++M  V+GK M A+ + + KVCLMANSLGAHVL  +LN+P  LP+K+HTVFFVQGAI RE F +  +F  +   VAGP++ +HSE DL+L+N+FG F G AIG SG   G +  M+ +    + PY   CGEW +++G++FI+EG+ +AGGHGDFKEDETTS YW+AI  E+ D  YDI
Sbjct:  140 GEETDIAKAALAAKKAIEDDNPDDEDLANQLKILADDSRNDSXXXXXXXCDA--KVRRLKEEAVVQKTGFFGAMSNVA---KIILNPFQHFAFGRFMARGQRTGKVMEKVLGKLMVANGDVKTKVCLMANSLGAHVLASILNKPQTLPHKIHTVFFVQGAITREVFADTKKFCAITNNVAGPIICTHSERDLMLKNVFGMFFGSAIGLSGVERGHSILMKGLRQAGEEPYRFACGEWTSVNGTQFIDEGNAIAGGHGDFKEDETTSCYWAAICTEVEDSCYDI 417          
BLAST of Ggra6566.t1 vs. uniprot
Match: R7QSG2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSG2_CHOCR)

HSP 1 Score: 201 bits (512), Expect = 1.270e-59
Identity = 90/164 (54.88%), Postives = 121/164 (73.78%), Query Frame = 0
Query:  285 EPRKKVCLMANSLGAHVLVGLLNRPHLLPYKLHTVFFVQGAIAREYFHEGGRFGHVKEVVAGPVVVSHSEHDLILRNIFGWFHGVAIGFSGTPGGAATKMRAVEALCDNPYSLECGEWNNIDGSEFINEGSPVAGGHGDFKEDETTSLYWSAIKMELGDPSYDI 448
            + + KVCLMANSLGAHVL G+LN+P  LP+K+HTVFFVQGAI RE F +  +F  +   VAGP++ +HSE DL+L+N+FG F+G AIG SG   G +  M+ +    + PY   CGEW +++G++FI+EG+ +AGGHGDFKEDETTS YW+AI  E+ D  YD+
Sbjct:    6 DVKTKVCLMANSLGAHVLAGILNKPQTLPHKIHTVFFVQGAITREVFADTKKFCAINNNVAGPIICTHSERDLLLKNMFGVFYGSAIGLSGVERGHSILMKGLRQAGEEPYRFACGEWTSVNGTQFIDEGNAIAGGHGDFKEDETTSCYWAAICTEVEDSCYDM 169          
BLAST of Ggra6566.t1 vs. uniprot
Match: A0A2V3IZR0 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZR0_9FLOR)

HSP 1 Score: 187 bits (475), Expect = 1.850e-53
Identity = 103/157 (65.61%), Postives = 124/157 (78.98%), Query Frame = 0
Query:  194 DLKQSMRTLVADSRXXXXXXXXXPDNVVEKERQFARE--ADYEVTSRGMQNIGDVFRLVMRPMETFVFGRLMKRGQRVGEIMGGVIGKCMKASEPRKKVCLMANSLGAHVLVGLLNRPHLLPYKLHTVFFVQGAIAREYFHEGGRFGHVKEVVAGPV 348
            DLKQ+MR  V +S   XXXXXXXPD VVE+E + AR+  +  EV +RG+ NI   F  VMRP ETFVFGR MKRGQ V ++MG V+GK MKA+E RKKVC++ANSL AHVL GLLNRPH LPYK+HTVFFVQGAIA+++FH G ++GHV EVVAGP+
Sbjct:   33 DLKQAMRMSVVESCDDXXXXXXXPDTVVEREHEVARQKGSQEEVENRGLNNI---FTTVMRPFETFVFGRHMKRGQTVCQVMGSVLGKLMKATEYRKKVCVLANSLDAHVLCGLLNRPHQLPYKIHTVFFVQGAIAKDWFHPGAKYGHVHEVVAGPL 186          
BLAST of Ggra6566.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Leptolyngbya sp. FACHB-321 TaxID=2692807 RepID=UPI001687C623 (hypothetical protein n=1 Tax=Leptolyngbya sp. FACHB-321 TaxID=2692807 RepID=UPI001687C623)

HSP 1 Score: 89.7 bits (221), Expect = 1.020e-15
Identity = 97/440 (22.05%), Postives = 180/440 (40.91%), Query Frame = 0
Query:   50 MPGNNAKYPYFLIQLSEKEELEYDGKLVSDAVVQYIQTHHVTHIFAQTHGWNTPPDKAVAVPFTEFIGGMQDDRAMPEPSEH----FQPIFVAFIWPAVPIAFGQTDDALTKA--QLLAQHERELGEESDIAHACDAAKRAIDNEDPDDDDLKQSMRTLVADSRXXXXXXXXXPDNVV----EKERQFAREADYEVTSRGMQNIGD------------VFRLVMRPMETFVFGRLMKRGQRVGEIMG-GVIGKCMKASEPRKKVCLMANSLGAHVLVGLLNRPH---LLPYKLHTVFFVQGAIA---------REYFHEGGRFGHVKE-VVAGPVVVSHSEHDLILRNIFGWFHGVAI---GFSGTPG----------GAATKMRAVEAL-CDNPYSLECGEWNNIDGSEFI---NEGSPVAGGHGDFKEDETTSLYWSA 436
            +P  + +Y         +E  E DG  +S  V++ +    +T +F  +HGW      A    +  +I  M  + A  E  +     F+P+ +   WP++P      +    +A  +L+  H  E   +S  A     A + I +E  DD +  +     V   +          + +V    +    F  E+ YE +    + IGD            +   V  P+    + ++    ++ GE  G   + +  +A+  + +  L+ +S G  V+   L  P    +LP  ++++  +QGA++         +E  H G  +  +++  VAGP+VV+ SEHD  +  ++    G+A+    F G P           G    +  ++ L CD  YS E G+  N++ S +I    + + + G HG+F E E     W A
Sbjct:    6 VPDTSLRYYLINFDALGQERNEPDGTKLSQTVLEVLAQEPITDVFIFSHGWQGDIP-AARNQYNRWIKAMAANTADIERIKQLRPGFKPLLIGLHWPSLPWGDESIEATTEEAAIELMVSHYAEHVADSQPAQE---ALKTIFSEALDDMEXDELSEATVEAYKVLDQETDLGSEGLVAAPGDDREPFNPESIYEESELETEIIGDSADFGLLNGGGFILSRVFSPLRALSYWKMKALARKFGESTGFEFLTRLQQATSEQVRFHLVGHSFGCIVMSATLAGPKAQGVLPRPVNSLCLIQGAVSMWTYCADIPKERGHAGYFYPVIRDGKVAGPIVVTLSEHDTAVGKLYPLASGLAMKTAAFDGFPKYGAIGAFGIQGDGIPLNPMKMLPCDQEYSFEAGQIYNLESSRYIWKKPKEAGLGGAHGEFDEPEVAHAVWVA 441          
BLAST of Ggra6566.t1 vs. uniprot
Match: A0A0C4YMU2 (Uncharacterized protein n=4 Tax=Cupriavidus TaxID=106589 RepID=A0A0C4YMU2_9BURK)

HSP 1 Score: 75.9 bits (185), Expect = 3.510e-11
Identity = 100/436 (22.94%), Postives = 159/436 (36.47%), Query Frame = 0
Query:   52 GNNAKYPYFLIQLSEKEELEYDGKL---VSDAVVQYIQTHHVTHIFAQTHGWNTPPDKAVAVPFTEFIGGMQ----DDRAMPEPSEHFQPIFVAFIWPAVPIAFGQTDDALTKAQL-----------LAQHERELGEESDIAHACDAAKRAIDNEDPDDDDLKQSMRTLVADSRXXXXXXXXXPDNVVEKER-QFAREADY-EVTSRGMQNIGDVFRLVMRPMETFVFGRLMKRGQRVGEIMGGVIGKCMKASEPRKKVCLMANSLGAHVLVGLLNRPH---LLPYKLHTVFFVQGAI-----AREYFHEGGRFGHVKEV-----VAGPVVVSHSEHDLILRNIFGWFHGVA--IGFSGTPGGAATKM---------RAVEALCDNP-------YSLECGEWNNIDGSEFINEGSPVAGGHGDFKEDETTSLYWSA 436
            G +A Y    +  +  E  +    +   +S+ ++   Q    T +F  +HGW      A  + +  +IG       D++AM      F    +   WP+ P    +  D  + A L           +  + + LG+   +  A      A   +  D   L   +R                P      +R  F   A + E    G    G V   ++ P+    F  + KRGQ VGE     +   +  + P  ++ LM +S GA V+   L  P     L     +   VQGA+     A +     G  G+   V     V+GP+VV+ S HD  +  ++ W  GVA  + F  T                 +  +A  D P       Y++  G+  NI+ SE+I  GS +AG H D    E   L W A
Sbjct:    8 GTSATYALLALDAAGNERSDDPDGIAGRMSERLLAQWQAAAPTDVFLWSHGWQGDLP-AARIQYDRWIGAFARSAGDEQAMRARHPDFAIAHIGVHWPSQPWGDEELGDGASFAPLAGPGTQGAQAMIDAYAQRLGDTPQVRAALAVIFEAARTQ-ADAVTLPDPVRQAYLQLDQALALGSEGPGGDAGADRLPFDPAASFAEANQLGAAFGGPVLGGLLAPLRQLSFWTMKKRGQTVGECGVFPLLNSIGDALPAARIHLMGHSFGAVVMSAALGGPGGTAALRRPAASCVLVQGAMSLWAYAPDIPVRPGTAGYCHHVLPDGKVSGPLVVTRSRHDSAVGTLYPWAAGVAGQVAFDATQASPXXXXXXXXXXXXXQGTDAATDAPMQPYDGNYAMTAGKVLNIEASEYICNGSGIAGAHNDIAGPEVAHLIWQA 441          
BLAST of Ggra6566.t1 vs. uniprot
Match: A0A2V3ITW5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITW5_9FLOR)

HSP 1 Score: 57.4 bits (137), Expect = 8.250e-7
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 0
Query:  194 DLKQSMRTLVADSRXXXXXXXXXPDNVVEKERQFAR--EADYEVTSRGMQNIGDVFRLVMRPMETFVF 259
            DLKQ+MR LV +S     XXXXXPD VVE+E + AR  E+  EV +RG+ NI   F  VMRP ETFVF
Sbjct:   33 DLKQAMRMLVVESFDDNKXXXXXPDTVVEREHEVARQKESQEEVENRGLNNI---FTTVMRPFETFVF 97          
The following BLAST results are available for this feature:
BLAST of Ggra6566.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IEW41.920e-9260.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QS284.420e-7949.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QSG21.270e-5954.88Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IZR01.850e-5365.61Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
hypothetical protein n=1 Tax=Leptolyngbya sp. FACHB-321 TaxID=2692807 RepID=UPI001687C6231.020e-1522.05hypothetical protein n=1 Tax=Leptolyngbya sp. FACH... [more]
A0A0C4YMU23.510e-1122.94Uncharacterized protein n=4 Tax=Cupriavidus TaxID=... [more]
A0A2V3ITW58.250e-757.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:290163..291733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6566.t1Ggra6566.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 290163..291733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6566.t1 ID=Ggra6566.t1|Name=Ggra6566.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=449bp
MGGGQSTEQTTEVVYDGNQPEEKHEEEADHGCHEKMSEEMKALLDANTYM
PGNNAKYPYFLIQLSEKEELEYDGKLVSDAVVQYIQTHHVTHIFAQTHGW
NTPPDKAVAVPFTEFIGGMQDDRAMPEPSEHFQPIFVAFIWPAVPIAFGQ
TDDALTKAQLLAQHERELGEESDIAHACDAAKRAIDNEDPDDDDLKQSMR
TLVADSRDDDDDDDDDPDNVVEKERQFAREADYEVTSRGMQNIGDVFRLV
MRPMETFVFGRLMKRGQRVGEIMGGVIGKCMKASEPRKKVCLMANSLGAH
VLVGLLNRPHLLPYKLHTVFFVQGAIAREYFHEGGRFGHVKEVVAGPVVV
SHSEHDLILRNIFGWFHGVAIGFSGTPGGAATKMRAVEALCDNPYSLECG
EWNNIDGSEFINEGSPVAGGHGDFKEDETTSLYWSAIKMELGDPSYDI*
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