Ggra6561.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6561.t1
Unique NameGgra6561.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length467
Homology
BLAST of Ggra6561.t1 vs. uniprot
Match: A0A2V3ID24 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID24_9FLOR)

HSP 1 Score: 619 bits (1595), Expect = 1.950e-218
Identity = 326/478 (68.20%), Postives = 379/478 (79.29%), Query Frame = 0
Query:    1 MADLKSRVTSR-IFPDATPSHTVSIKVRRKALQSAVDNGVRKRDFYYRYAPYHTLRRVLVEAAEAGTTDSILYAPERPNVHESSARVTATEYVKVSQDSCTDLVRRNDDFEVSFIGFSVAQQDFVGDNELLLCSLARKTDHHEVSEFESSIASTTIGSSSN-----------DTALSEQIQKAKLRDGTVPITPKKKTIDLGDLPTALPIRPGDVPFLHFDPETDGHDTGSEPDAFVPIPGTKRLFIQRRGTKLDGKSEG-MRDVSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPYLKFISWLLKFANTVGRSALRKVARPDHVMSTDVSFMLAEPEGVEKGDEGYEQREEYGNYLRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLHRHGYRSRSAAVNEKEYFPLTGVSYTVLKVTRGCSPYDMELRKDMFERHRGRLIQLLKKYTGTLESMTAEAAASDEPPSDAKE 465
            M DLK+R+++R +F DATP  T+SI V RK+LQSA  + +RKRD++ R  P  T RRV VEA+E GT DSIL+APERPN +ES  RV ATE++KV+Q++C+D+VR +DDFEVSFIG SVAQQD++GDNE+LLCSLAR+ DH EV E+ +S A +TI SS++           D A+   + K   RDG VPI PK+KT+DL DLPTALPIRPGDV FLHFDPETDGHDTGSEPD F PIPGTKRLFIQRRG+       G +RDVS+RFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVP LKFISWLLKFANTVGRSAL+KVARPDHVMS+DVSFMLAEPE V   D    QREEYGNYLRYGYYFFL  PVDAKL+AQT AST NVQLL+  HGYR++ A +NEKEYFPL+GVSY V+KVTRGCSP D + R +MF RH GRL QLLKKYTGTL S+TA A  +    ++ KE
Sbjct:    1 MNDLKTRISTRALFTDATPDSTISIIVLRKSLQSATSDSLRKRDWHERCLPLPTRRRVFVEASEYGTADSILFAPERPNANESHQRVAATEFIKVNQNTCSDVVRHDDDFEVSFIGLSVAQQDYIGDNEMLLCSLARREDHQEVLEYLASSAYSTINSSNSSVDAHKNGTEEDVAVRSDVGKTNERDGVVPIPPKQKTVDLSDLPTALPIRPGDVTFLHFDPETDGHDTGSEPDTFTPIPGTKRLFIQRRGSASTLAEGGNVRDVSIRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPILKFISWLLKFANTVGRSALKKVARPDHVMSSDVSFMLAEPE-VSSNDGRTIQREEYGNYLRYGYYFFLFSPVDAKLHAQTDASTHNVQLLIKHHGYRAKMANLNEKEYFPLSGVSYVVIKVTRGCSPCDNKQRSEMFARHLGRLTQLLKKYTGTLGSVTAFAVGNAYSETEKKE 477          
BLAST of Ggra6561.t1 vs. uniprot
Match: A0A2V3III8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III8_9FLOR)

HSP 1 Score: 251 bits (640), Expect = 1.050e-74
Identity = 164/455 (36.04%), Postives = 257/455 (56.48%), Query Frame = 0
Query:   16 ATPSHTVSIKVRRKALQSAVDNGVRKRDFYYRYAPYHTLRRVLVEAAEAGTTDSILYAPERPNVHESSARVTATEYVKVSQDSCTDLVRRNDDFEVSFIGFSVAQQDFVG--DNELLLCSLARKTDHHEVSEFES-SIASTTIGSSSNDTALSEQIQKAKLRDGTVPITPKKKTIDLGDLPTALPIRPGDVPFLHFDPETDGHDTGSEPDAFVPIPGTKRLFIQ-RRGTKLDGKSEGMRDVSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPYLKFISWLLKFANTVGRSALRKVARPDHVMSTDVSFMLAE---PEGVEKGDEGYEQREEYG--NYLRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLHRHGYRSRSAAVNEKEYFPLTGVSYTVLKVTRGCSPYDMELRKDMFERHRGRLIQLLKKYTGTLESMTAEAAASDEPPS 461
            A   +++SI V    L+ + +NG+RK + + R   +   RRV VEAA A   D + YAP+  +  ES++R TAT+Y++++ D   +LV++ D+FE+SF+G +++ QD      NEL+L SL   +D  +    +  S A++   +  N   +S+Q+      D + P   +  +ID   L  AL     DVPF+H+D E DG  TG++P+ FVPIP +K ++ Q RR  +     +   D+SVRF V++IDK+++EQ+ A+  + ++   V K A ++PY + ++   +    +G+  LRK + PDHV+  D+ F LA    P G +   +G    E     NYLRYGYYFFL   VDAKLY QT +S QNV LLL R  + ++ A  NE E+FP+T VSY V+KV+  C+    E +  + + H+ RL  +L+   G +  M  +     EP S
Sbjct:    5 APKPNSISILVHPNDLKGSANNGLRKGNRFSRRTCFRRWRRVSVEAAPAMVRDRVFYAPDESHKPESTSR-TATQYIRITPD-VDNLVKKGDEFEISFVGMNISPQDLFACNKNELVLYSLTSGSDSAKCEWAQKISSANSLKVNMQNGFVVSDQVAP----DQSQPKIRRVASID-SRLNPALSTYQKDVPFIHYDTEGDGRTTGTKPNTFVPIPASKAVYKQFRRSCRRREIDDD--DISVRFEVLDIDKVSDEQIEAVFGITQLGDFVEKGAVALPYAELVARAFQAVAAIGKRGLRKYSAPDHVLPVDMKFRLANSHMPAGDDSKSKGTNVTEHTSRANYLRYGYYFFLEKNVDAKLYVQTRSSAQNVPLLLRRTDFDAKCAQRNELEWFPMTNVSYVVMKVSPACTSGLEEQKMALCKAHKQRLDAILQ--VGNILEMLEKNKKRREPSS 448          
BLAST of Ggra6561.t1 vs. uniprot
Match: A0A2V3IEE2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEE2_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 9.780e-49
Identity = 128/376 (34.04%), Postives = 189/376 (50.27%), Query Frame = 0
Query:   90 EYVKVSQDSCTDLVRRNDDFEVSFIGFSVAQQDFV-------GDNELLLCSLARKTDHHEVSEFESSIASTTIG---SSSNDTALSEQIQ----KAKLRDGTVPITPKKKTIDLGDL--PTALPIRPGDVPFLHFDPETDGHDTGSEPDAFVPIPGTKRLFIQRRGTKLDGKSEGMRD-------VSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPYLKFISWLLKFANTVGRSALRKVARPDHVMSTDVSFMLAEPEGVEKGDEGYEQ---REEYGNYLRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLHRHGYRSRSAAVNEKEYFPLTGVSYTVLKVTRGCSPYDMELRKDMFERHRGRLIQLL 439
            E  KV  D+  ++VR  D+F +SF+G SVA  D V        DNELLL S+   T+        SS+ + TI    ++ ++  LSE+      KA+L     P +  K   +   L  PT       D  F+H+DP  D H+TG+  D FV +P +KR +   +    + K+    D       + V+FTVMEIDK+++ Q  A+  ++ V   +   A S+PY+  ++      +++G+  L+  +RPDHV+S DV F LA     +  ++G      R +  NYLRYGYYFFLS  V AKLY  T A   ++ L++ R              YFPLT VSY V+KV+RGC     E  +   E H+ RL  +L
Sbjct:    5 EMDKVRPDA-KNVVRNTDEFVISFVGMSVASHDAVTGLSKHKSDNELLLYSVKCATN--------SSLPNATIAEEETTQDELELSEKNVDDEGKAELIREKDPSSTAKHLENAEQLKVPTTFGAN-NDSVFIHYDPVADAHNTGTLADTFVNVPASKRAYACSKEVLREHKNNQEADDRLCLKKIPVKFTVMEIDKISDMQARAVMGVDHVGSFMSDTAGSIPYIALLTKAFAVGSSIGKHGLKSYSRPDHVLSADVEFCLANAPSDDDNEDGENDESVRTKKENYLRYGYYFFLSHKVPAKLYTMTNAVDDSLPLMMKRAEEGLSRRRGQHCRYFPLTEVSYVVMKVSRGCCSLSHEEIRKRSEGHKVRLENML 370          
The following BLAST results are available for this feature:
BLAST of Ggra6561.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ID241.950e-21868.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3III81.050e-7436.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEE29.780e-4934.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:270701..272213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6561.t1Ggra6561.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 270701..272213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6561.t1 ID=Ggra6561.t1|Name=Ggra6561.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=467bp
MADLKSRVTSRIFPDATPSHTVSIKVRRKALQSAVDNGVRKRDFYYRYAP
YHTLRRVLVEAAEAGTTDSILYAPERPNVHESSARVTATEYVKVSQDSCT
DLVRRNDDFEVSFIGFSVAQQDFVGDNELLLCSLARKTDHHEVSEFESSI
ASTTIGSSSNDTALSEQIQKAKLRDGTVPITPKKKTIDLGDLPTALPIRP
GDVPFLHFDPETDGHDTGSEPDAFVPIPGTKRLFIQRRGTKLDGKSEGMR
DVSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPYLKFISWLLK
FANTVGRSALRKVARPDHVMSTDVSFMLAEPEGVEKGDEGYEQREEYGNY
LRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLHRHGYRSRSAAVNEKEYF
PLTGVSYTVLKVTRGCSPYDMELRKDMFERHRGRLIQLLKKYTGTLESMT
AEAAASDEPPSDAKEK*
back to top