Ggra9222.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra9222.t1
Unique Name	Ggra9222.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	570

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000075_pilon	contig	tig00000075_pilon:419010..420719 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	130081.XP_005704795.1
Preferred name	G6PD4
PFAMs	G6PD_C,G6PD_N
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00001,RC00066
KEGG ko	ko:K00036,ko:K17279
KEGG Reaction	R00835,R02736,R10907
KEGG Pathway	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230
KEGG Module	M00004,M00006,M00008
GOs	GO:0003674,GO:0003824,GO:0004345,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019318,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564
Evalue	4.28e-227
EggNOG OGs	COG0364@1\|root,KOG0563@2759\|Eukaryota
EC	1.1.1.363,1.1.1.49
Description	glucose-6-phosphate dehydrogenase activity
COG category	G
BRITE	ko00000,ko00001,ko00002,ko01000,ko04147

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9222	Ggra9222	Gracilaria gracilis GNS1m male	gene	tig00000075_pilon 419010..420719 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9222.t1.start1	Ggra9222.t1.start1	Gracilaria gracilis GNS1m male	start_codon	tig00000075_pilon 419010..419012 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9222.t1.CDS1	Ggra9222.t1.CDS1	Gracilaria gracilis GNS1m male	CDS	tig00000075_pilon 419010..420719 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9222.t1.exon1	Ggra9222.t1.exon1	Gracilaria gracilis GNS1m male	exon	tig00000075_pilon 419010..420719 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9222.t1.stop1	Ggra9222.t1.stop1	Gracilaria gracilis GNS1m male	stop_codon	tig00000075_pilon 420717..420719 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9222.t1	Ggra9222.t1	Gracilaria gracilis GNS1m male	polypeptide	tig00000075_pilon 419010..420719 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000075_pilon:419010..420719+
coding sequence from alignment at tig00000075_pilon:419010..420719+

mRNA sequence

>Ggra9222.t1 ID=Ggra9222.t1|Name=Ggra9222.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=570bp
MAFVNAVPSGRFVAKRSSPSVFTSSEKPVHPVTAPRLPRMVALPDTPPSS
TQSVPSSNPPQSYSVHPTDHGLALMDSVHLRNAKVRGEPVAIVVLGASGD
LAKKKTFPAIFSLYYHGLLPTDFILYGFSRSAMSNEQFRELIYDTLSCRV
IDGEKCQEKMDLFLPKCFYHRGDYYSSASFGELNAVLKNSFEADHPKANR
LYYLAIPPKVFNASCANIDNSGRASSGWTRVVVEKPFGHDLTSYRELRSN
LASVLSEEETFRIDHFLAKELVQNLMTLRFANVIFEPLWNRHHVKSVQIT
FKEHFGVEGRAGYFDQVGIIRDIMQNHLLQMLALLAMEPPVSLCAEDIRD
EKVKVLRSIAPLSAADFATGQYAATDSMSTGYLEDEGVPEDSRTPTFASC
VLHINNARWDGVPFLMRAGKALDERKTEIRIQFKNVPGALFPVSNGAEHN
ELVIRVQPDEAIYMKIVSKVPGLTSRMEEARLNLFYRHAWEESKDIPDAY
ERLILDVIQGEKSLFIRDDELEAAWTIFTPALDELEGATAPKPELYHYGS
SGPQSSDSLAAKYDVHWSN*

spliced messenger RNA

>Ggra9222.t1 ID=Ggra9222.t1|Name=Ggra9222.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1710bp|location=Sequence derived from alignment at tig00000075_pilon:419010..420719+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTTCGTTAATGCTGTGCCTAGCGGCCGCTTTGTGGCCAAAAGATC
ATCGCCCTCGGTCTTCACGTCTTCTGAGAAACCTGTTCATCCGGTGACTG
CTCCAAGACTGCCGCGTATGGTCGCCCTACCAGACACTCCTCCATCTTCG
ACACAGTCCGTGCCGTCATCAAATCCGCCGCAGTCATATTCCGTCCATCC
CACAGATCATGGTCTGGCACTCATGGACTCTGTACATCTGCGCAACGCAA
AGGTTCGTGGCGAGCCCGTCGCGATAGTCGTTTTAGGCGCTTCTGGCGAT
CTTGCCAAGAAGAAGACATTCCCTGCCATTTTCAGCTTGTACTACCATGG
TTTACTTCCTACTGATTTCATCCTCTATGGCTTCTCCAGAAGCGCCATGT
CCAATGAGCAATTTCGGGAACTGATCTATGATACGCTTAGCTGCCGAGTC
ATCGACGGTGAAAAGTGTCAAGAAAAGATGGACCTCTTCCTGCCCAAATG
CTTTTATCACAGAGGAGACTATTATAGCTCTGCATCCTTTGGAGAACTTA
ACGCCGTTTTAAAGAATAGCTTTGAAGCGGATCACCCGAAGGCCAATCGC
TTGTATTATCTGGCCATCCCGCCAAAGGTGTTCAATGCTAGCTGCGCGAA
CATTGACAACAGTGGCCGTGCCTCAAGTGGATGGACTCGAGTCGTCGTCG
AAAAGCCGTTTGGTCATGACCTCACTTCCTATCGAGAGCTTCGCTCCAAC
CTGGCCTCTGTACTGTCGGAGGAGGAGACTTTCCGCATTGATCACTTCCT
TGCCAAGGAGCTGGTGCAGAACCTTATGACGCTGCGATTCGCGAACGTCA
TTTTCGAACCTTTGTGGAATCGACATCACGTGAAGAGCGTCCAGATTACT
TTCAAGGAGCACTTTGGTGTGGAAGGCCGTGCTGGATACTTTGACCAAGT
TGGCATCATCAGAGATATCATGCAGAATCATCTACTGCAAATGCTTGCTT
TGCTGGCAATGGAACCGCCGGTCAGTCTGTGTGCCGAGGATATTCGAGAC
GAGAAGGTCAAAGTATTACGCTCGATTGCACCGTTATCTGCTGCTGACTT
TGCCACAGGTCAATATGCAGCCACGGATTCTATGTCTACCGGTTATTTAG
AGGATGAAGGGGTTCCTGAAGACTCTCGTACTCCTACGTTTGCATCTTGC
GTTTTGCACATAAACAATGCACGATGGGATGGGGTTCCTTTCCTAATGCG
AGCAGGAAAGGCGCTCGATGAAAGAAAAACTGAGATTCGAATCCAGTTCA
AAAATGTACCGGGCGCCTTATTCCCCGTCAGTAACGGTGCTGAACATAAT
GAATTGGTAATTCGCGTGCAGCCAGATGAAGCAATTTATATGAAGATTGT
GTCGAAGGTACCTGGCCTGACATCAAGAATGGAGGAGGCAAGATTGAATC
TCTTCTATCGCCATGCATGGGAAGAATCAAAAGATATTCCGGATGCTTAC
GAACGTCTGATTTTGGACGTGATTCAAGGAGAGAAATCACTCTTCATTCG
TGACGACGAACTTGAGGCTGCGTGGACGATATTTACTCCCGCTCTTGACG
AGCTCGAGGGAGCTACTGCTCCGAAGCCGGAACTGTATCACTACGGAAGC
AGTGGCCCGCAAAGTAGTGATAGCCTCGCAGCGAAGTATGATGTACACTG
GTCAAACTAA

protein sequence of Ggra9222.t1

>Ggra9222.t1 ID=Ggra9222.t1|Name=Ggra9222.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=570bp
MAFVNAVPSGRFVAKRSSPSVFTSSEKPVHPVTAPRLPRMVALPDTPPSS
TQSVPSSNPPQSYSVHPTDHGLALMDSVHLRNAKVRGEPVAIVVLGASGD
LAKKKTFPAIFSLYYHGLLPTDFILYGFSRSAMSNEQFRELIYDTLSCRV
IDGEKCQEKMDLFLPKCFYHRGDYYSSASFGELNAVLKNSFEADHPKANR
LYYLAIPPKVFNASCANIDNSGRASSGWTRVVVEKPFGHDLTSYRELRSN
LASVLSEEETFRIDHFLAKELVQNLMTLRFANVIFEPLWNRHHVKSVQIT
FKEHFGVEGRAGYFDQVGIIRDIMQNHLLQMLALLAMEPPVSLCAEDIRD
EKVKVLRSIAPLSAADFATGQYAATDSMSTGYLEDEGVPEDSRTPTFASC
VLHINNARWDGVPFLMRAGKALDERKTEIRIQFKNVPGALFPVSNGAEHN
ELVIRVQPDEAIYMKIVSKVPGLTSRMEEARLNLFYRHAWEESKDIPDAY
ERLILDVIQGEKSLFIRDDELEAAWTIFTPALDELEGATAPKPELYHYGS
SGPQSSDSLAAKYDVHWSN*

mRNA from alignment at tig00000075_pilon:419010..420719+

Legend: start_codonpolypeptideCDSexonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra9222.t1 ID=Ggra9222.t1|Name=Ggra9222.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1710bp|location=Sequence derived from alignment at tig00000075_pilon:419010..420719+ (Gracilaria gracilis GNS1m male)
ATGGCGTTCGTTAATGCTGTGCCTAGCGGCCGCTTTGTGGCCAAAAGATC
ATCGCCCTCGGTCTTCACGTCTTCTGAGAAACCTGTTCATCCGGTGACTG
CTCCAAGACTGCCGCGTATGGTCGCCCTACCAGACACTCCTCCATCTTCG
ACACAGTCCGTGCCGTCATCAAATCCGCCGCAGTCATATTCCGTCCATCC
CACAGATCATGGTCTGGCACTCATGGACTCTGTACATCTGCGCAACGCAA
AGGTTCGTGGCGAGCCCGTCGCGATAGTCGTTTTAGGCGCTTCTGGCGAT
CTTGCCAAGAAGAAGACATTCCCTGCCATTTTCAGCTTGTACTACCATGG
TTTACTTCCTACTGATTTCATCCTCTATGGCTTCTCCAGAAGCGCCATGT
CCAATGAGCAATTTCGGGAACTGATCTATGATACGCTTAGCTGCCGAGTC
ATCGACGGTGAAAAGTGTCAAGAAAAGATGGACCTCTTCCTGCCCAAATG
CTTTTATCACAGAGGAGACTATTATAGCTCTGCATCCTTTGGAGAACTTA
ACGCCGTTTTAAAGAATAGCTTTGAAGCGGATCACCCGAAGGCCAATCGC
TTGTATTATCTGGCCATCCCGCCAAAGGTGTTCAATGCTAGCTGCGCGAA
CATTGACAACAGTGGCCGTGCCTCAAGTGGATGGACTCGAGTCGTCGTCG
AAAAGCCGTTTGGTCATGACCTCACTTCCTATCGAGAGCTTCGCTCCAAC
CTGGCCTCTGTACTGTCGGAGGAGGAGACTTTCCGCATTGATCACTTCCT
TGCCAAGGAGCTGGTGCAGAACCTTATGACGCTGCGATTCGCGAACGTCA
TTTTCGAACCTTTGTGGAATCGACATCACGTGAAGAGCGTCCAGATTACT
TTCAAGGAGCACTTTGGTGTGGAAGGCCGTGCTGGATACTTTGACCAAGT
TGGCATCATCAGAGATATCATGCAGAATCATCTACTGCAAATGCTTGCTT
TGCTGGCAATGGAACCGCCGGTCAGTCTGTGTGCCGAGGATATTCGAGAC
GAGAAGGTCAAAGTATTACGCTCGATTGCACCGTTATCTGCTGCTGACTT
TGCCACAGGTCAATATGCAGCCACGGATTCTATGTCTACCGGTTATTTAG
AGGATGAAGGGGTTCCTGAAGACTCTCGTACTCCTACGTTTGCATCTTGC
GTTTTGCACATAAACAATGCACGATGGGATGGGGTTCCTTTCCTAATGCG
AGCAGGAAAGGCGCTCGATGAAAGAAAAACTGAGATTCGAATCCAGTTCA
AAAATGTACCGGGCGCCTTATTCCCCGTCAGTAACGGTGCTGAACATAAT
GAATTGGTAATTCGCGTGCAGCCAGATGAAGCAATTTATATGAAGATTGT
GTCGAAGGTACCTGGCCTGACATCAAGAATGGAGGAGGCAAGATTGAATC
TCTTCTATCGCCATGCATGGGAAGAATCAAAAGATATTCCGGATGCTTAC
GAACGTCTGATTTTGGACGTGATTCAAGGAGAGAAATCACTCTTCATTCG
TGACGACGAACTTGAGGCTGCGTGGACGATATTTACTCCCGCTCTTGACG
AGCTCGAGGGAGCTACTGCTCCGAAGCCGGAACTGTATCACTACGGAAGC
AGTGGCCCGCAAAGTAGTGATAGCCTCGCAGCGAAGTATGATGTACACTG
GTCAAACTAA

Coding sequence (CDS) from alignment at tig00000075_pilon:419010..420719+

>Ggra9222.t1 ID=Ggra9222.t1|Name=Ggra9222.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1710bp|location=Sequence derived from alignment at tig00000075_pilon:419010..420719+ (Gracilaria gracilis GNS1m male)
ATGGCGTTCGTTAATGCTGTGCCTAGCGGCCGCTTTGTGGCCAAAAGATC
ATCGCCCTCGGTCTTCACGTCTTCTGAGAAACCTGTTCATCCGGTGACTG
CTCCAAGACTGCCGCGTATGGTCGCCCTACCAGACACTCCTCCATCTTCG
ACACAGTCCGTGCCGTCATCAAATCCGCCGCAGTCATATTCCGTCCATCC
CACAGATCATGGTCTGGCACTCATGGACTCTGTACATCTGCGCAACGCAA
AGGTTCGTGGCGAGCCCGTCGCGATAGTCGTTTTAGGCGCTTCTGGCGAT
CTTGCCAAGAAGAAGACATTCCCTGCCATTTTCAGCTTGTACTACCATGG
TTTACTTCCTACTGATTTCATCCTCTATGGCTTCTCCAGAAGCGCCATGT
CCAATGAGCAATTTCGGGAACTGATCTATGATACGCTTAGCTGCCGAGTC
ATCGACGGTGAAAAGTGTCAAGAAAAGATGGACCTCTTCCTGCCCAAATG
CTTTTATCACAGAGGAGACTATTATAGCTCTGCATCCTTTGGAGAACTTA
ACGCCGTTTTAAAGAATAGCTTTGAAGCGGATCACCCGAAGGCCAATCGC
TTGTATTATCTGGCCATCCCGCCAAAGGTGTTCAATGCTAGCTGCGCGAA
CATTGACAACAGTGGCCGTGCCTCAAGTGGATGGACTCGAGTCGTCGTCG
AAAAGCCGTTTGGTCATGACCTCACTTCCTATCGAGAGCTTCGCTCCAAC
CTGGCCTCTGTACTGTCGGAGGAGGAGACTTTCCGCATTGATCACTTCCT
TGCCAAGGAGCTGGTGCAGAACCTTATGACGCTGCGATTCGCGAACGTCA
TTTTCGAACCTTTGTGGAATCGACATCACGTGAAGAGCGTCCAGATTACT
TTCAAGGAGCACTTTGGTGTGGAAGGCCGTGCTGGATACTTTGACCAAGT
TGGCATCATCAGAGATATCATGCAGAATCATCTACTGCAAATGCTTGCTT
TGCTGGCAATGGAACCGCCGGTCAGTCTGTGTGCCGAGGATATTCGAGAC
GAGAAGGTCAAAGTATTACGCTCGATTGCACCGTTATCTGCTGCTGACTT
TGCCACAGGTCAATATGCAGCCACGGATTCTATGTCTACCGGTTATTTAG
AGGATGAAGGGGTTCCTGAAGACTCTCGTACTCCTACGTTTGCATCTTGC
GTTTTGCACATAAACAATGCACGATGGGATGGGGTTCCTTTCCTAATGCG
AGCAGGAAAGGCGCTCGATGAAAGAAAAACTGAGATTCGAATCCAGTTCA
AAAATGTACCGGGCGCCTTATTCCCCGTCAGTAACGGTGCTGAACATAAT
GAATTGGTAATTCGCGTGCAGCCAGATGAAGCAATTTATATGAAGATTGT
GTCGAAGGTACCTGGCCTGACATCAAGAATGGAGGAGGCAAGATTGAATC
TCTTCTATCGCCATGCATGGGAAGAATCAAAAGATATTCCGGATGCTTAC
GAACGTCTGATTTTGGACGTGATTCAAGGAGAGAAATCACTCTTCATTCG
TGACGACGAACTTGAGGCTGCGTGGACGATATTTACTCCCGCTCTTGACG
AGCTCGAGGGAGCTACTGCTCCGAAGCCGGAACTGTATCACTACGGAAGC
AGTGGCCCGCAAAGTAGTGATAGCCTCGCAGCGAAGTATGATGTACACTG
GTCAAACTAA