Ggra9181.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra9181.t1 vs. uniprot
Match: A0A2V3IPC7 (Translation initiation factor IF-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPC7_9FLOR) HSP 1 Score: 153 bits (386), Expect = 3.640e-43 Identity = 89/184 (48.37%), Postives = 120/184 (65.22%), Query Frame = 0
Query: 1 MSPQQALREARIQGKDLMQITLVKSEHAHASPLPVVRILDYGAFEEQRQKKRYQQQKATKQRQMEHRKQSVLKQIRFSPLTDRNDMRIKLKHAAQFLIDGYRVKVYMQFKRGQGGLKHSATQSLINAALALAPFGNVQGLPPSASIHDLFKS--DGEEQPQQRKPLELVLQPLPKTQREKLSTD 182
MS + AL AR GKDLMQ+T+ KS+ +PLPVVRI+DY +KQSVLKQIRFSP+TD +DM IK++HA +FL++GYRVK+Y+QF+RG G LK A Q+LI AA L+ +G VQG+P ++ LF+ D E+ Q R+PL + +QPLPK QREKL+++
Sbjct: 55 MSGRDALYRARTAGKDLMQLTVSKSDTD--APLPVVRIVDYEQXXXXXXXXXXXXXXXXXXXXXXQKKQSVLKQIRFSPVTDPHDMHIKMQHAQRFLLEGYRVKIYVQFRRGHGKLKRDAKQALIKAAHQLSAYGVVQGIPSGGTVDSLFEQPPDAEQHEQPRRPLHIFIQPLPKQQREKLTSE 236
BLAST of Ggra9181.t1 vs. uniprot
Match: R7Q6Y2 (Translation initiation factor IF3, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6Y2_CHOCR) HSP 1 Score: 140 bits (354), Expect = 2.160e-38 Identity = 82/185 (44.32%), Postives = 119/185 (64.32%), Query Frame = 0
Query: 1 MSPQQALREARIQGKDLMQITLVKSEHAHASPLPVVRILDYGAFEEQRQKKRYQQQKATKQRQMEHRKQSVLKQIRFSPLTDRNDMRIKLKHAAQFLIDGYRVKVYMQFKRGQGGLKHSATQSLINAALALAPFGNVQGLPPSASIHDLFKSDGEEQPQ-----QRKPLELVLQPLPKTQREKLS 180
M ++AL EAR G+DLM++ + HA P PVVRI+DY A + R KK Y +K K+ + RK+ LKQ+R SP TD +DM+IK++ A +FL DGYRV+VYMQF+RGQG L+ A +L+ AA L G V G+P + D+FK + E++ ++KPLE+++QPL + +RE L+
Sbjct: 54 MPSRKALSEARGLGRDLMEV------NGHAKP-PVVRIVDYTALQSARAKKSYDARKRGKENRKMERKEGALKQVRLSPSTDTHDMQIKMRRAREFLCDGYRVRVYMQFRRGQGRLQEDAKAALVAAAERLEEVGTVMGVPQGKEVADMFKVEKEDEEAMGVTVKKKPLEILIQPLSRKKRELLN 231
BLAST of Ggra9181.t1 vs. uniprot
Match: A0A7V2F529 (Translation initiation factor IF-3 n=2 Tax=Bacteria TaxID=2 RepID=A0A7V2F529_RHOMR) HSP 1 Score: 72.4 bits (176), Expect = 1.200e-12 Identity = 54/126 (42.86%), Postives = 72/126 (57.14%), Query Frame = 0
Query: 6 ALREARIQGKDLMQITLVKSEHAHASPLPVVRILDYGAFEEQRQKKRYQQQKATKQRQMEHRKQSVLKQIRFSPLTDRNDMRIKLKHAAQFLIDGYRVKVYMQFKRGQGGLKHSA----TQSLINA 127
AL AR +G DL++I HA P PV +I+DYG F RY+QQK K+ + + + Q + K+IRF P TD +D K KHA QFL DG +VK ++QF RG+ + A Q LINA
Sbjct: 35 ALEMARQRGLDLVEIA------PHADP-PVCKIVDYGKF-------RYEQQKKEKEARRKQQAQQI-KEIRFRPHTDTHDFEFKAKHARQFLEDGNKVKAWVQF-RGRDIIYQEAGLEVLQRLINA 144
BLAST of Ggra9181.t1 vs. uniprot
Match: A0A848Y1I5 (Translation initiation factor IF-3 n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848Y1I5_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 2.860e-12 Identity = 43/106 (40.57%), Postives = 66/106 (62.26%), Query Frame = 0
Query: 5 QALREARIQGKDLMQITLVKSEHAHASPLPVVRILDYGAFEEQRQKKRYQQQKATKQRQMEHRKQSVLKQIRFSPLTDRNDMRIKLKHAAQFLIDGYRVKVYMQFK 110
QAL A +G DL++I+ +A P PV +I+D+G + RY+QQK K+++ + KQ LK++RF P TD +D KLKHA +FL +G +VK ++QF+
Sbjct: 43 QALAAAEQRGLDLVEIS------PNADP-PVTKIMDFGKY-------RYEQQKKVKEQRKKQAKQGELKEVRFRPRTDTHDYGFKLKHAREFLEEGNKVKAWVQFR 134
BLAST of Ggra9181.t1 vs. uniprot
Match: A0A3C1YQM6 (Translation initiation factor IF-3 n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3C1YQM6_9BACT) HSP 1 Score: 70.9 bits (172), Expect = 5.810e-12 Identity = 51/137 (37.23%), Postives = 74/137 (54.01%), Query Frame = 0
Query: 1 MSPQQALREARIQGKDLMQITLVKSEHAHASPLPVVRILDYGAFEEQRQKKRYQQQKATKQRQMEHRKQSVLKQIRFSPLTDRNDMRIKLKHAAQFLIDGYRVKVYMQFKRGQGGLKHSATQSLINAALALAPFGNV 137
MSP++AL A +GKDL+++ +A+P PV +I+D+G F+ + QKK Q+K H+ S LK++RF P TD +D K KHA QFL DG +VK + FK + K + L LA + V
Sbjct: 30 MSPREALAIAVQRGKDLIEVV------PNATP-PVCKIMDFGKFKYEIQKKEKLQKK--------HQHVSQLKELRFHPSTDTHDFEFKAKHAIQFLEDGDKVKATVIFKGREVAYKERGFELLNQLTEKLAAYSKV 151
BLAST of Ggra9181.t1 vs. uniprot
Match: A0A259U3I2 (Translation initiation factor IF-3 n=2 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259U3I2_9BACT) HSP 1 Score: 70.5 bits (171), Expect = 1.040e-11 Identity = 42/106 (39.62%), Postives = 67/106 (63.21%), Query Frame = 0
Query: 5 QALREARIQGKDLMQITLVKSEHAHASPLPVVRILDYGAFEEQRQKKRYQQQKATKQRQMEHRKQSVLKQIRFSPLTDRNDMRIKLKHAAQFLIDGYRVKVYMQFK 110
QA+ A+ +G DL++I+ +A P PV +I+D+G + RY+QQK K+++ + KQ LK+IRF P TD +D K KHA +FL +G++VK ++QF+
Sbjct: 46 QAIEIAQNRGMDLVEIS------PNADP-PVAKIMDFGKY-------RYEQQKKLKEQRKKQAKQGELKEIRFRPRTDDHDYDFKTKHAREFLEEGHKVKAWVQFR 137
BLAST of Ggra9181.t1 vs. uniprot
Match: A0A7V8BP92 (Translation initiation factor IF-3 n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V8BP92_9BACT) HSP 1 Score: 69.7 bits (169), Expect = 1.050e-11 Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 0
Query: 5 QALREARIQGKDLMQITLVKSEHAHASPLPVVRILDYGAFEEQRQKKRYQQQKATKQRQMEHRKQSVLKQIRFSPLTDRNDMRIKLKHAAQFLIDGYRVKVYMQFK 110
+ALR+AR + DL++I +A P PV +I+DYG + RY+ QK K + +H Q +K++RF P TD +D + K+KHA FL DGY+VK+ + +K
Sbjct: 27 EALRKAREENLDLLEIV------PNAEP-PVCKIIDYGKY-------RYEIQKREKDARKKHTHQGEVKELRFRPATDDHDYQFKMKHAFNFLKDGYKVKLVIVYK 118
BLAST of Ggra9181.t1 vs. uniprot
Match: A0A800J8M1 (Translation initiation factor IF-3 n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800J8M1_9BACT) HSP 1 Score: 70.1 bits (170), Expect = 1.150e-11 Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 0
Query: 1 MSPQQALREARIQGKDLMQITLVKSEHAHASPLPVVRILDYGAFEEQRQKKRYQQQKATKQRQMEHRKQSVLKQIRFSPLTDRNDMRIKLKHAAQFLIDGYRVKVYMQFK 110
M QAL A +G DL+ I+ +A P PV +I+D+G + RY+QQK K+++ + KQ LK++RF P TD +D K KHA +FL +G++VK ++QF+
Sbjct: 42 MPTSQALDAASQRGLDLVVIS------PNADP-PVAKIMDFGKY-------RYEQQKKAKEQRKKQAKQGELKEVRFRPRTDDHDYEFKTKHAREFLEEGHKVKAWVQFR 137
BLAST of Ggra9181.t1 vs. uniprot
Match: translation initiation factor IF-3 n=1 Tax=Rubrivirga sp. SAORIC476 TaxID=1961794 RepID=UPI001E336EEE (translation initiation factor IF-3 n=1 Tax=Rubrivirga sp. SAORIC476 TaxID=1961794 RepID=UPI001E336EEE) HSP 1 Score: 69.3 bits (168), Expect = 1.550e-11 Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 0
Query: 1 MSPQQALREARIQGKDLMQITLVKSEHAHASPLPVVRILDYGAFEEQRQKKRYQQQKATKQRQMEHRKQSVLKQIRFSPLTDRNDMRIKLKHAAQFLIDGYRVKVYMQFK 110
M ++A+ AR G DL++I+ A + P PV +I+D+G F RY+QQK K+++ + Q LK++RF P TD +D KLKHA +FL G +VK ++QF+
Sbjct: 23 MRTEEAIDLARSMGLDLVEIS------ASSDP-PVTKIMDFGKF-------RYEQQKKAKEQRKKQAHQGELKEVRFRPRTDDHDYDFKLKHAREFLEKGNKVKAWVQFR 118
BLAST of Ggra9181.t1 vs. uniprot
Match: A0A7V0VF76 (Translation initiation factor IF-3 n=2 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A7V0VF76_9BACT) HSP 1 Score: 69.3 bits (168), Expect = 2.080e-11 Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 0
Query: 1 MSPQQALREARIQGKDLMQITLVKSEHAHASPLPVVRILDYGAFEEQRQKKRYQQQKATKQRQMEHRKQSVL--KQIRFSPLTDRNDMRIKLKHAAQFLIDGYRVKVYMQFK 110
MSP++ALR A +G DL++I +A P PV +I+DYG + + QKK Q+K KQ+V+ K+IRF P TD +D K +H QFL+DGY+VK + +K
Sbjct: 34 MSPREALRIAESKGLDLVEIV------PNAKP-PVCKIIDYGKYRYEVQKKEKNQRK----------KQAVIEVKEIRFHPNTDDHDFEFKARHCRQFLLDGYKVKATVIYK 128 The following BLAST results are available for this feature:
BLAST of Ggra9181.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra9181.t1 ID=Ggra9181.t1|Name=Ggra9181.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=188bpback to top |