Ggra9269.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9269.t1
Unique NameGgra9269.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length476
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:663261..664688 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9269Ggra9269Gracilaria gracilis GNS1m malegenetig00000075_pilon 663261..664688 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9269.t1.stop1Ggra9269.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000075_pilon 663261..663263 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9269.t1.CDS1Ggra9269.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000075_pilon 663261..664688 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9269.t1.exon1Ggra9269.t1.exon1Gracilaria gracilis GNS1m maleexontig00000075_pilon 663261..664688 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9269.t1.start1Ggra9269.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000075_pilon 664686..664688 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9269.t1Ggra9269.t1Gracilaria gracilis GNS1m malepolypeptidetig00000075_pilon 663261..664688 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9269.t1 ID=Ggra9269.t1|Name=Ggra9269.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=476bp
MNLLKLLCCFLLVYPSRCQRLKQPFSYGPYRLRTFFNRTHSLSTQSPLAS
AISSSPSALASHLLLHDTFTSILSAIDKRVVQRHPLACNIRAEPWIAASI
DSSMALQIFAPDRVCQTSIDIICAVQQRELNPFVLRNPLQVLQNAAEQTH
LAAQRALPPLVSAQRMSSLFSSFHPLSSWTYMHDAQHCRVENAMAYRVNG
SLYVHAAVTNHPVHNFVPDLQRAFISEFVDKRFRALKLVHPRWNDSQLEH
ASTIMRRSQGRAEFASVTMAAEENPALTNALRHNQVIIDLASDAIVPSNI
AILALPMVMTLIPVAFVAELSTLATLLYIVFTDLLSTLPFVIKGFELYNS
ARINRNEMVAYHVGTRQNGKIELWVARCTGSEGFQKVGIAFLIIAMCVTA
LGFILELYAWNRMRKTTPHKGKPGCVTDSYQFTIDCREGPFGELVRDTGL
FAQTDRYEMVGYEADMHGLGTRRRR*
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spliced messenger RNA

>Ggra9269.t1 ID=Ggra9269.t1|Name=Ggra9269.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1428bp|location=Sequence derived from alignment at tig00000075_pilon:663261..664688- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACCTTCTCAAGCTCCTATGCTGCTTTCTCCTCGTCTATCCATCGCG
CTGCCAGCGCCTCAAGCAACCCTTCAGCTACGGCCCCTACCGTCTGCGCA
CCTTCTTCAACCGCACCCATTCACTCTCCACCCAGTCCCCGCTAGCCTCC
GCAATCAGTTCATCACCGTCCGCGCTCGCCTCGCACCTGCTTCTGCACGA
CACCTTCACCTCCATCCTCTCCGCCATCGATAAGCGCGTCGTCCAACGTC
ACCCGCTCGCCTGCAACATCCGCGCAGAGCCTTGGATCGCAGCCTCCATC
GACTCCTCCATGGCGCTGCAAATCTTCGCCCCCGACCGCGTCTGTCAGAC
CAGCATCGACATCATCTGCGCCGTGCAACAGCGCGAATTGAACCCCTTCG
TGCTTCGAAACCCGCTGCAAGTGCTGCAAAACGCCGCGGAGCAAACTCAT
CTCGCCGCGCAACGTGCGCTACCCCCGCTCGTCTCCGCGCAGCGTATGTC
GTCGTTGTTCTCGTCGTTCCATCCACTTTCGTCGTGGACGTATATGCACG
ACGCGCAGCATTGTCGCGTTGAGAATGCCATGGCGTATCGCGTCAATGGT
AGCTTGTATGTGCATGCCGCTGTCACCAATCACCCCGTGCACAACTTTGT
GCCAGATCTGCAACGCGCCTTTATTTCCGAGTTTGTTGACAAGCGCTTTC
GCGCCTTGAAGCTCGTCCATCCTCGCTGGAATGACTCTCAGTTGGAGCAC
GCTTCCACCATTATGAGACGCAGTCAAGGAAGGGCCGAGTTTGCGAGTGT
CACCATGGCCGCGGAGGAAAACCCCGCTTTGACCAATGCGTTGCGACACA
ATCAGGTGATTATTGATCTTGCTAGTGACGCTATTGTTCCCAGTAATATC
GCCATACTCGCGCTGCCAATGGTCATGACCCTTATTCCCGTCGCGTTTGT
GGCCGAGTTGAGTACGCTGGCCACTTTATTGTATATCGTGTTTACCGATC
TGTTGTCCACCTTGCCGTTTGTCATCAAGGGCTTTGAGCTGTACAACTCG
GCGCGTATAAATAGAAATGAGATGGTAGCCTACCATGTCGGCACTCGACA
GAATGGAAAGATTGAACTTTGGGTCGCGAGATGCACTGGTTCTGAGGGCT
TTCAAAAGGTTGGTATTGCCTTCCTTATCATAGCCATGTGTGTCACTGCG
CTTGGCTTTATACTTGAGCTTTACGCCTGGAATAGAATGAGAAAAACAAC
GCCGCACAAAGGAAAACCTGGCTGTGTCACCGATAGTTATCAATTTACCA
TAGACTGCCGTGAGGGGCCCTTTGGCGAGCTAGTGCGTGATACCGGTTTG
TTCGCACAAACAGACAGGTATGAAATGGTCGGCTATGAGGCAGATATGCA
CGGCTTGGGGACCAGAAGGCGGCGCTGA
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protein sequence of Ggra9269.t1

>Ggra9269.t1 ID=Ggra9269.t1|Name=Ggra9269.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=476bp
MNLLKLLCCFLLVYPSRCQRLKQPFSYGPYRLRTFFNRTHSLSTQSPLAS
AISSSPSALASHLLLHDTFTSILSAIDKRVVQRHPLACNIRAEPWIAASI
DSSMALQIFAPDRVCQTSIDIICAVQQRELNPFVLRNPLQVLQNAAEQTH
LAAQRALPPLVSAQRMSSLFSSFHPLSSWTYMHDAQHCRVENAMAYRVNG
SLYVHAAVTNHPVHNFVPDLQRAFISEFVDKRFRALKLVHPRWNDSQLEH
ASTIMRRSQGRAEFASVTMAAEENPALTNALRHNQVIIDLASDAIVPSNI
AILALPMVMTLIPVAFVAELSTLATLLYIVFTDLLSTLPFVIKGFELYNS
ARINRNEMVAYHVGTRQNGKIELWVARCTGSEGFQKVGIAFLIIAMCVTA
LGFILELYAWNRMRKTTPHKGKPGCVTDSYQFTIDCREGPFGELVRDTGL
FAQTDRYEMVGYEADMHGLGTRRRR*
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mRNA from alignment at tig00000075_pilon:663261..664688-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9269.t1 ID=Ggra9269.t1|Name=Ggra9269.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1428bp|location=Sequence derived from alignment at tig00000075_pilon:663261..664688- (Gracilaria gracilis GNS1m male)
ATGAACCTTCTCAAGCTCCTATGCTGCTTTCTCCTCGTCTATCCATCGCG
CTGCCAGCGCCTCAAGCAACCCTTCAGCTACGGCCCCTACCGTCTGCGCA
CCTTCTTCAACCGCACCCATTCACTCTCCACCCAGTCCCCGCTAGCCTCC
GCAATCAGTTCATCACCGTCCGCGCTCGCCTCGCACCTGCTTCTGCACGA
CACCTTCACCTCCATCCTCTCCGCCATCGATAAGCGCGTCGTCCAACGTC
ACCCGCTCGCCTGCAACATCCGCGCAGAGCCTTGGATCGCAGCCTCCATC
GACTCCTCCATGGCGCTGCAAATCTTCGCCCCCGACCGCGTCTGTCAGAC
CAGCATCGACATCATCTGCGCCGTGCAACAGCGCGAATTGAACCCCTTCG
TGCTTCGAAACCCGCTGCAAGTGCTGCAAAACGCCGCGGAGCAAACTCAT
CTCGCCGCGCAACGTGCGCTACCCCCGCTCGTCTCCGCGCAGCGTATGTC
GTCGTTGTTCTCGTCGTTCCATCCACTTTCGTCGTGGACGTATATGCACG
ACGCGCAGCATTGTCGCGTTGAGAATGCCATGGCGTATCGCGTCAATGGT
AGCTTGTATGTGCATGCCGCTGTCACCAATCACCCCGTGCACAACTTTGT
GCCAGATCTGCAACGCGCCTTTATTTCCGAGTTTGTTGACAAGCGCTTTC
GCGCCTTGAAGCTCGTCCATCCTCGCTGGAATGACTCTCAGTTGGAGCAC
GCTTCCACCATTATGAGACGCAGTCAAGGAAGGGCCGAGTTTGCGAGTGT
CACCATGGCCGCGGAGGAAAACCCCGCTTTGACCAATGCGTTGCGACACA
ATCAGGTGATTATTGATCTTGCTAGTGACGCTATTGTTCCCAGTAATATC
GCCATACTCGCGCTGCCAATGGTCATGACCCTTATTCCCGTCGCGTTTGT
GGCCGAGTTGAGTACGCTGGCCACTTTATTGTATATCGTGTTTACCGATC
TGTTGTCCACCTTGCCGTTTGTCATCAAGGGCTTTGAGCTGTACAACTCG
GCGCGTATAAATAGAAATGAGATGGTAGCCTACCATGTCGGCACTCGACA
GAATGGAAAGATTGAACTTTGGGTCGCGAGATGCACTGGTTCTGAGGGCT
TTCAAAAGGTTGGTATTGCCTTCCTTATCATAGCCATGTGTGTCACTGCG
CTTGGCTTTATACTTGAGCTTTACGCCTGGAATAGAATGAGAAAAACAAC
GCCGCACAAAGGAAAACCTGGCTGTGTCACCGATAGTTATCAATTTACCA
TAGACTGCCGTGAGGGGCCCTTTGGCGAGCTAGTGCGTGATACCGGTTTG
TTCGCACAAACAGACAGGTATGAAATGGTCGGCTATGAGGCAGATATGCA
CGGCTTGGGGACCAGAAGGCGGCGCTGA
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Coding sequence (CDS) from alignment at tig00000075_pilon:663261..664688-

>Ggra9269.t1 ID=Ggra9269.t1|Name=Ggra9269.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1428bp|location=Sequence derived from alignment at tig00000075_pilon:663261..664688- (Gracilaria gracilis GNS1m male)
ATGAACCTTCTCAAGCTCCTATGCTGCTTTCTCCTCGTCTATCCATCGCG
CTGCCAGCGCCTCAAGCAACCCTTCAGCTACGGCCCCTACCGTCTGCGCA
CCTTCTTCAACCGCACCCATTCACTCTCCACCCAGTCCCCGCTAGCCTCC
GCAATCAGTTCATCACCGTCCGCGCTCGCCTCGCACCTGCTTCTGCACGA
CACCTTCACCTCCATCCTCTCCGCCATCGATAAGCGCGTCGTCCAACGTC
ACCCGCTCGCCTGCAACATCCGCGCAGAGCCTTGGATCGCAGCCTCCATC
GACTCCTCCATGGCGCTGCAAATCTTCGCCCCCGACCGCGTCTGTCAGAC
CAGCATCGACATCATCTGCGCCGTGCAACAGCGCGAATTGAACCCCTTCG
TGCTTCGAAACCCGCTGCAAGTGCTGCAAAACGCCGCGGAGCAAACTCAT
CTCGCCGCGCAACGTGCGCTACCCCCGCTCGTCTCCGCGCAGCGTATGTC
GTCGTTGTTCTCGTCGTTCCATCCACTTTCGTCGTGGACGTATATGCACG
ACGCGCAGCATTGTCGCGTTGAGAATGCCATGGCGTATCGCGTCAATGGT
AGCTTGTATGTGCATGCCGCTGTCACCAATCACCCCGTGCACAACTTTGT
GCCAGATCTGCAACGCGCCTTTATTTCCGAGTTTGTTGACAAGCGCTTTC
GCGCCTTGAAGCTCGTCCATCCTCGCTGGAATGACTCTCAGTTGGAGCAC
GCTTCCACCATTATGAGACGCAGTCAAGGAAGGGCCGAGTTTGCGAGTGT
CACCATGGCCGCGGAGGAAAACCCCGCTTTGACCAATGCGTTGCGACACA
ATCAGGTGATTATTGATCTTGCTAGTGACGCTATTGTTCCCAGTAATATC
GCCATACTCGCGCTGCCAATGGTCATGACCCTTATTCCCGTCGCGTTTGT
GGCCGAGTTGAGTACGCTGGCCACTTTATTGTATATCGTGTTTACCGATC
TGTTGTCCACCTTGCCGTTTGTCATCAAGGGCTTTGAGCTGTACAACTCG
GCGCGTATAAATAGAAATGAGATGGTAGCCTACCATGTCGGCACTCGACA
GAATGGAAAGATTGAACTTTGGGTCGCGAGATGCACTGGTTCTGAGGGCT
TTCAAAAGGTTGGTATTGCCTTCCTTATCATAGCCATGTGTGTCACTGCG
CTTGGCTTTATACTTGAGCTTTACGCCTGGAATAGAATGAGAAAAACAAC
GCCGCACAAAGGAAAACCTGGCTGTGTCACCGATAGTTATCAATTTACCA
TAGACTGCCGTGAGGGGCCCTTTGGCGAGCTAGTGCGTGATACCGGTTTG
TTCGCACAAACAGACAGGTATGAAATGGTCGGCTATGAGGCAGATATGCA
CGGCTTGGGGACCAGAAGGCGGCGCTGA
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