Ggra9238.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra9238.t1 vs. uniprot
Match: A0A2V3IFE4 (Cleavage stimulating factor 64 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE4_9FLOR) HSP 1 Score: 375 bits (962), Expect = 1.490e-127 Identity = 209/336 (62.20%), Postives = 230/336 (68.45%), Query Frame = 0
Query: 1 MGRPPGTTVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLPQNISTLPNKPGVQNLPPKPGPQMPNHPNMQHGGLPPALASANPSMERMSLPEIHQTMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQIMLGM--------------------------------------------------------------------------------GMGEQEAFLQSVMSMTQEEMSRLPSEYRNYMLELKQFLAMHGAGGLNPGMNQXXXXXXXXXGPH 256
MGRPPGTTVFVGNISYDTTEEQL+EVFSQVGNVVNFRLMHD+ETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPN+ QNI+ +K G QN+ K Q+P HP++QH LPPALASANPSMERMSLPE+HQTM+HLKKAIVQNPNEMRDLLLANPRLAQAIMQGQ+MLGM GMGEQEA LQ VM+M+QEE+++LP+E+RNY+LELKQFLAMHGAGG+NPGMNQ G H
Sbjct: 1 MGRPPGTTVFVGNISYDTTEEQLHEVFSQVGNVVNFRLMHDSETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNIAQNITPPASKQGGQNVGQKNVHQVP-HPHLQHAALPPALASANPSMERMSLPEVHQTMLHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQLMLGMVPPPMMPAPQAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVXXXXXXXXXXXXXXXXXXXXXMPHALMQMPGLPFAQGMGEQEALLQGVMNMSQEEINQLPAEHRNYVLELKQFLAMHGAGGINPGMNQPMPPGMPPGGNH 335
BLAST of Ggra9238.t1 vs. uniprot
Match: R7QCA3 (RNA recognition motif-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCA3_CHOCR) HSP 1 Score: 238 bits (606), Expect = 8.400e-75 Identity = 128/192 (66.67%), Postives = 145/192 (75.52%), Query Frame = 0
Query: 1 MGRPPGTTVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLPQNISTLPNKPGVQNLPPKPGPQMPNHPNMQHGGLPPALASANPSMERMSLPEIHQTMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQIMLGM 192
MGRPPGTTVFVGNISYDTTE+QL EVFS+VGNVV+FRLM+D++TGRAKG+GFCEYEDKETAMSARRNLNGT LNGRPLRVD TDSDKQ AA NG +S P+ PP P +P LASANPSM M+ EIH M+HLKKA++QN ++RDLLLANPRLA AI+ GQIMLGM
Sbjct: 1 MGRPPGTTVFVGNISYDTTEDQLKEVFSEVGNVVSFRLMYDHDTGRAKGFGFCEYEDKETAMSARRNLNGTQLNGRPLRVDLTDSDKQAAAANG------LSLAPDPHAKSPAPPXXXXXNP--------AIPAPLASANPSMAAMTPAEIHAAMLHLKKAVLQNRADLRDLLLANPRLAHAILHGQIMLGM 178
BLAST of Ggra9238.t1 vs. uniprot
Match: cleavage stimulating factor 64-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0131 (cleavage stimulating factor 64-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0131) HSP 1 Score: 180 bits (456), Expect = 1.270e-49 Identity = 103/197 (52.28%), Postives = 128/197 (64.97%), Query Frame = 0
Query: 6 GTTVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLPQNISTLPNKPGVQNLPPKPGPQMPNHP----------NMQHGGLPPALASANPSMERMSLPEIHQTMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQIMLGM 192
G TVFVGNI+YD TE+QL ++FSQVG VVNFR+++D ETGR KGYGFCEYED ETAMSARRNLNG LNGR LRVDFT+SDK P N +T G N +H LP AL+ NPS+ ++LP+IH+ M+ LK+A + PN++RDLL +P+LA A++QGQIMLGM
Sbjct: 10 GATVFVGNINYDATEDQLKDIFSQVGVVVNFRVVYDQETGRPKGYGFCEYEDAETAMSARRNLNGYELNGRQLRVDFTESDK----------PGNAATAAGGAGXXXXXXXXXXXXXXXXXXXXXXGVTKNSEHL-LPDALSGPNPSLAMLALPQIHEVMLQLKRAATEFPNDLRDLLANSPQLAHAVLQGQIMLGM 195
BLAST of Ggra9238.t1 vs. uniprot
Match: M2XKX0 (mRNA splicing factor, putative isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XKX0_GALSU) HSP 1 Score: 153 bits (387), Expect = 1.900e-41 Identity = 90/186 (48.39%), Postives = 122/186 (65.59%), Query Frame = 0
Query: 11 VGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLP---QNISTLPN-KPGVQNLPPKPGPQMPNHPNMQHGGLPPALASANPSMERMSLPEIHQTMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQIMLGM 192
VGNI+Y+T+EEQL E+ SQ+G +++FR+++D ETG+ KGY FCEY D E A+SA RNLNGT LNGR LRVD DSDK+ ++ N+ N ST N K G N G N+Q GL + A S+E++S +IH+ M+ +K QNP ++R LLLANP+L A++QGQIMLG+
Sbjct: 26 VGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAIRNLNGTELNGRTLRVDLADSDKRELGQSAANMETGNNNPSTASNMKAGALNTSGGTG-------NIQ--GL--SNLGAKGSLEQLSCQQIHEIMLQMKALAQQNPEQVRQLLLANPQLTYALLQGQIMLGL 200
BLAST of Ggra9238.t1 vs. uniprot
Match: C3ZMC6 (RRM domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZMC6_BRAFL) HSP 1 Score: 145 bits (365), Expect = 3.720e-39 Identity = 89/221 (40.27%), Postives = 132/221 (59.73%), Query Frame = 0
Query: 8 TVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLPQNISTLPNKPGVQNLPPKPGPQMPNHPNMQHGGLPPALASANPSMERMSLPEIHQTMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQIMLGMGMGEQEAFLQSVMSMTQEEMSRLPSEYRNYMLELKQ 228
+VFVGNI Y+ TEEQL ++FS+VG V++FRL++D ETG+ KGYGFCEY+D+ETA+SA RNLNG LNGR LRVD S+K L Q P++ + P P +Q P A++ A S+ + E+ M +K I NP E R++LL NP+LA A++Q Q+++ + A + V+ ++ E+++ LP E R ++ LK+
Sbjct: 19 SVFVGNIPYEATEEQLKDIFSEVGPVISFRLVYDRETGKPKGYGFCEYKDQETALSAMRNLNGHELNGRQLRVDNAASEKSKE-----ELKQLTVAGPSQ------------ESPYGPPVQPEDAPEAISQAVASLPPEQMFEL---MKQMKLCIQNNPQEARNMLLQNPQLAYALLQAQVVMRIA-----ALIMQVLQLSPEQIAMLPPEQRQSIMILKE 214
BLAST of Ggra9238.t1 vs. uniprot
Match: A0A7S3EJ57 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJ57_9RHOD) HSP 1 Score: 144 bits (364), Expect = 3.060e-38 Identity = 86/193 (44.56%), Postives = 118/193 (61.14%), Query Frame = 0
Query: 2 GRPPGTTVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDK-QIAARNGPNLPQNISTLPNKPGVQNLPPKPGPQMPNHPNMQHGGLPPALASA-NPSMERMSLPEIHQTMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQIMLGM 192
G+P TVFVGNI +DTTEE L E+FSQVG V +FRL++D +TG+ KG+GFCEYED ETAMSA RNLNG +NGRPLRV ++ DK ++ + G +PQ ++ N G GG AS N ERM+ ++ M+++K+ I ++ +R LL +P + A++QGQIMLGM
Sbjct: 5 GQP--ATVFVGNIPFDTTEEHLKEIFSQVGVVSSFRLVYDQQTGKPKGFGFCEYEDAETAMSALRNLNGVEVNGRPLRVSLSEHDKSRVQEQTGQTVPQGKNSQGNTGG--------------------GGRGDGAASRQNVITERMTPQQVFDVMLNMKELIQKDEGTVRTLLNNDPNMTYALLQGQIMLGM 175
BLAST of Ggra9238.t1 vs. uniprot
Match: A0A5J4Z720 (Cleavage stimulating factor 64 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z720_PORPP) HSP 1 Score: 140 bits (354), Expect = 1.180e-36 Identity = 86/189 (45.50%), Postives = 113/189 (59.79%), Query Frame = 0
Query: 7 TTVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDK--QIAARNGPNLPQNISTLPNKPGVQNLPPKPGPQMPNHPNMQHGGL-PPALASANPSMERMSLPEIHQTMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQIMLGM 192
+TVFVGNI Y TTEEQL EVF QVGNVV+FR+++D ETG+ KG+GFCEYED ETAMSA RNLN +NGRPLRVD+T+ +K Q A G + + P + GG PA A+ +M MSL I ++ L+ + QNP+ +R LL N L+ A++ G +MLG+
Sbjct: 10 STVFVGNIPYGTTEEQLREVFGQVGNVVSFRILYDKETGKPKGFGFCEYEDTETAMSAIRNLNQVEVNGRPLRVDYTEGEKRDQGGASGGXXXXXXXXXV----------------AADAPKIVLGGHGTPAFANGI-AMRDMSLSAIFDVLLQLRDMLHQNPDGLRTLLQGNQALSHAVVMGMMMLGL 181
BLAST of Ggra9238.t1 vs. uniprot
Match: cleavage stimulation factor subunit 2-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0A5D9 (cleavage stimulation factor subunit 2-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0A5D9) HSP 1 Score: 143 bits (361), Expect = 5.080e-36 Identity = 85/183 (46.45%), Postives = 114/183 (62.30%), Query Frame = 0
Query: 8 TVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLPQNISTLPNKPGVQNLPPKPGPQMPNHPNMQHGGLPPALASANPSMERMSLPEIHQTMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQIML 190
+VFVGNI Y+ TEEQL ++FS+VG VV+FRL++D ETG+ KGYGFCEY+D+ETA+SA RNLNG LNGRPLRVD S+K N L N PP + P P ++ P A++ A S+ + E+ M +K I NPNE R++LL NP+LA A++Q Q+M+
Sbjct: 12 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNLNGYELNGRPLRVDNAASEK------------NKEELKNLQASLGGPPT---ESPYGPEVEPEKAPEAISKAVASLPPEQMFEL---MKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVMM 176
BLAST of Ggra9238.t1 vs. uniprot
Match: A0A314Y7F6 (Cleavage stimulating factor 64 n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314Y7F6_PRUYE) HSP 1 Score: 137 bits (345), Expect = 3.380e-35 Identity = 95/213 (44.60%), Postives = 120/213 (56.34%), Query Frame = 0
Query: 9 VFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDK-----QIAARNGPNLPQNISTLPNKPG----VQNLPPKP--------------GPQMPNHPNMQ--HGGLPPALASANPSME----RMSLPEIHQTMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQIMLGM 192
VFVGNI +D TEEQL E+ +VG VV+FRL+ D ETG+ KGYGFCEY+D+ETA+SARRNL G +NGR LRVDF ++DK + R GP L N+ G V+ L +P G +Q GL LASAN + +MS +++Q M LK VQN R LLLA P+L +A+ Q QIMLGM
Sbjct: 9 VFVGNIPFDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLTANVDPQKQVVGPSVHVEALQHQPIGLHIAITAATVMAGALGGAQAGLQSSQSGLQNQLASANDPLTLHLAKMSRGQLNQIMSELKVMAVQNKELARQLLLARPQLPKALFQAQIMLGM 221
BLAST of Ggra9238.t1 vs. uniprot
Match: A0A6A3BGZ9 (Cleavage stimulating factor 64 n=3 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BGZ9_HIBSY) HSP 1 Score: 140 bits (352), Expect = 7.030e-35 Identity = 98/223 (43.95%), Postives = 125/223 (56.05%), Query Frame = 0
Query: 1 MGRPPGTTVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDK-----QIAARNGPNLPQNISTLPNKPG--VQ----NLPP--------------------KPGPQMPNHPNMQHGGLPPALASANPSMERMSLPEIHQTMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQIMLGM 192
M P VFVGNI YD TEEQL E+ +VG VV+FRL+ D ETG+ KGYGFCEY D+ETA+SARRNL G +NGR LRVDF ++DK + AR GP L NI + NK G VQ +L P + G Q ++ N G PA + +MS ++++ M LKK Q+ R+LLL+ P+L +AI Q QIMLGM
Sbjct: 1 MAAPQHRCVFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGQPKGYGFCEYMDEETALSARRNLQGYEINGRQLRVDFAENDKGSDKNREQARGGPGLATNIDSQ-NKGGQAVQGEMFHLQPVGLHSAINAASLMAEALGGVQAGLQ--HNQNALPGQPAPATDPLTLHLAKMSRSQLNEIMSELKKMATQSKERARELLLSKPQLLKAIFQAQIMLGM 220 The following BLAST results are available for this feature:
BLAST of Ggra9238.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra9238.t1 ID=Ggra9238.t1|Name=Ggra9238.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=266bpback to top |