Ggra9223.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9223.t1
Unique NameGgra9223.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length294
Homology
BLAST of Ggra9223.t1 vs. uniprot
Match: A0A2V3IP52 (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP52_9FLOR)

HSP 1 Score: 556 bits (1432), Expect = 1.380e-199
Identity = 281/293 (95.90%), Postives = 289/293 (98.63%), Query Frame = 0
Query:    1 MESTDIFLGGEDSGVREVQVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRFTASGTVYVTDSFPLPHSESGEEVAVDTDYHKNMYDLHNRVNSAEELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKIDDLALSSEFRSIPVCMKPEKAEKVGLDVLFKNRRREEGDLTSPVMASEIENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNASDFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKLLCVDTTPKY 293
            MESTDIFLGGEDSGVREVQVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRF+ SGTV+VTDSFPLPHSESG+EVAVDTDYHKNMYDLH RVNS EELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKIDDLALSSEFRSIPVCMKP+KAEKVGLDVLFKNRRREEGDL+SPVMASE+ENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNA+DFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKLL VDT+PKY
Sbjct:    1 MESTDIFLGGEDSGVREVQVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRFSTSGTVHVTDSFPLPHSESGDEVAVDTDYHKNMYDLHKRVNSTEELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKIDDLALSSEFRSIPVCMKPDKAEKVGLDVLFKNRRREEGDLSSPVMASELENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNAADFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKLLAVDTSPKY 293          
BLAST of Ggra9223.t1 vs. uniprot
Match: R7QK05 (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK05_CHOCR)

HSP 1 Score: 458 bits (1178), Expect = 7.650e-161
Identity = 234/296 (79.05%), Postives = 262/296 (88.51%), Query Frame = 0
Query:    1 MESTDIFLGGEDSGVREVQVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRFTASGTVYVTDSFPLPHSESGEE---VAVDTDYHKNMYDLHNRVNSAEELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKIDDLALSSEFRSIPVCMKPEKAEKVGLDVLFKNRRREEGDLTSPVMASEIENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNASDFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKLLCVDTTPKY 293
            MESTDIF+GGEDSG R+V+VSPVVLFNV DH+ RRT+ K+RVIGTLLGR  A+GTV VT+ FPLPHSE  +E   VAVD  Y++ M+ LH R+N+ EE VGWYATGTETD+ SV+IHEFY REC NPVHLLVDA L S RFD++AFVSTAY+I+D ALSSE R IPVCMKP KAEKVGLDVLFKNRRREEGD + P+MASEIENLEKSMERLL+LLD +GKNVDAVVAGEVEG+VTTGRFLAETLTMVPRMNASDFE+LFGDNMRDLLMVAYLCKLTQTQLIVAEKLL +DTTPK+
Sbjct:    1 MESTDIFVGGEDSGARQVKVSPVVLFNVADHYQRRTDDKRRVIGTLLGRVNANGTVEVTNCFPLPHSEKVKEFKEVAVDNIYNETMHTLHRRLNTTEEPVGWYATGTETDISSVVIHEFYARECRNPVHLLVDAGLVSGRFDVNAFVSTAYQINDRALSSELRPIPVCMKPGKAEKVGLDVLFKNRRREEGDKSLPIMASEIENLEKSMERLLELLDVVGKNVDAVVAGEVEGNVTTGRFLAETLTMVPRMNASDFEQLFGDNMRDLLMVAYLCKLTQTQLIVAEKLLAIDTTPKH 296          
BLAST of Ggra9223.t1 vs. uniprot
Match: A0A1X6P9F2 (MPN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9F2_PORUM)

HSP 1 Score: 312 bits (799), Expect = 1.360e-102
Identity = 169/333 (50.75%), Postives = 217/333 (65.17%), Query Frame = 0
Query:    3 STDIFLGGEDSGVREVQVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRFTA-SGTVYVTDSFPLPHSESGEEVAVDTDYHKNMYDLHNRVNSAEELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMS-------------------------AFVSTAYKIDDLALSSEFRSIPVCMKPEKAEKVGLDVLFKNRRREEGDLTSP---------------------VMASEIENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNASDFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKLLCVD 288
            STDIFL G+D+ VR V+V+PVVL  V+DHF+RR  GK+RVIGTLLG F    G+V VT SFP+PH E+ +E+AVD +Y++ M DLH  V+SA  +VGWYATGTETD  SV+IHEFYGREC  PVHLLV+A+L++                               A+VS+AY I ++AL SEFR +PV + P   +KV +DVLFKNRRR E    +                       +ASE++N++  + RLLDLL  +G+ VDAVVAGE  GDV  GRFLAETL ++PR+++  F++LFGDNMRDLLMV YLC   Q QL +AE+LL VD
Sbjct:    2 STDIFLSGDDTSVRAVRVAPVVLLGVVDHFMRRAAGKRRVIGTLLGVFHPHDGSVDVTGSFPVPHDETADEIAVDIEYNRTMVDLHRNVSSAHAIVGWYATGTETDGNSVLIHEFYGRECAAPVHLLVNADLAAVAXXXXXXXXXXXXXDAAASTAGVPSPAAPRAYVSSAYTIGEVALRSEFRPVPVAVTPSTPDKVAMDVLFKNRRRLEAARETXXXXXXXXXXXXXXXXXXXXXAALASEVDNVQAGLSRLLDLLTVVGRAVDAVVAGEATGDVAAGRFLAETLALMPRVDSHVFDKLFGDNMRDLLMVTYLCSFAQAQLPIAERLLSVD 334          
BLAST of Ggra9223.t1 vs. uniprot
Match: A0A7S1THB6 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THB6_9RHOD)

HSP 1 Score: 306 bits (784), Expect = 5.390e-101
Identity = 153/289 (52.94%), Postives = 210/289 (72.66%), Query Frame = 0
Query:    1 MESTDIFLGGEDSGVREVQVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRFTASGTVYVTDSFPLPHSESGEEVAVDTDYHKNMYDLHNRVNSAEELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKIDDLALSSEFRSIPVCMKPEKAEKVGLDVLFKNRRREEGDLTSPV-MASEIENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNASDFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKLLCVD 288
            ++ST IF+ G+   V  V VSPVVL +VLDH  RR +G++RVIGTL+G       ++VT S P+PH+E G EVAV+T++H+ M +LH +VN  E +VGWYATG ETD  S++IHEFYGREC  PVH+L+D E + ++F    F+STAY+I  LALSSEFR +PV +K +++E+VGLD L       +     P+ + +E++ +E ++ERLL+LLD + + VDAVVAG+V GD   GRFL+ETL  VP++N  +FE+L GDNMRDLLM+ YL KL+Q QL +AE+LLCVD
Sbjct:    4 VDSTGIFVLGDADPVHAVVVSPVVLLSVLDHHSRRPKGQRRVIGTLMGTLGTGRVLHVTSSLPVPHAEEGGEVAVNTEFHRTMLELHQKVNPGE-VVGWYATGAETDADSMVIHEFYGRECAAPVHILIDTEFTRDKFYFRGFMSTAYQIGKLALSSEFRPVPVSLKLDRSERVGLDALIDRADSSKTTGREPLSLCNELDTIEAALERLLELLDVVRERVDAVVAGDVAGDPKLGRFLSETLARVPKVNVQEFEKLLGDNMRDLLMIIYLSKLSQAQLSLAEELLCVD 291          
BLAST of Ggra9223.t1 vs. uniprot
Match: A0A5J4YZS3 (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZS3_PORPP)

HSP 1 Score: 268 bits (686), Expect = 1.630e-85
Identity = 150/335 (44.78%), Postives = 203/335 (60.60%), Query Frame = 0
Query:    2 ESTDIFLGGEDSGVREVQVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRFTASGTVYVTDSFPLPHSESGEEVAVDTDYHKNMYDLHNRVNSAEELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKIDDLALSSEFRSIPVCMKPEKAEKVGLDVLFKNRRREEG-----------------DLTSPVMASE-------------------------------IENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNASDFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKLLCVD 288
            ++TDIFLGGE   V+ V+VSPVVLF+VLDHFIRR E   RVIG L+G      +V V  +FP+PHSE   E A+D +Y   M DLH++V+  E++VGWY TG  TD  SV+ HEF+GR C  PVHLLVDA+L  + F   AFV+TA  I+++ LSSEFR +PV ++   +EKVGLD L  + +R E                     + V+A+E                               +ENLE+S+ RL +L++ +G++VD VV+G+ +GD+  GR LAETL  VP +N  +FE++  D++RD LMV Y  KLTQ QL +AEKLL VD
Sbjct:    3 DTTDIFLGGEGYDVKCVRVSPVVLFSVLDHFIRRPETNHRVIGALIGTLHDDFSVDVRSAFPVPHSEPNGEAALDDEYFATMLDLHSKVSPNEQIVGWYGTGRVTDANSVVFHEFFGRSCACPVHLLVDADLEGDNFHPVAFVTTACSINEMPLSSEFRQVPVLLEVSSSEKVGLDALSTDLKRREALGEDADXXXXXXXXXXXXXANAVLAAESVPSFFQTDHQTTAESRKLRRLRKKYAMPTEVENLERSLVRLRELVEIVGESVDRVVSGQDKGDIKVGRCLAETLASVPLVNPIEFEKMISDSLRDHLMVMYCAKLTQVQLAMAEKLLEVD 337          
BLAST of Ggra9223.t1 vs. uniprot
Match: A0A7S0ZD64 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZD64_9RHOD)

HSP 1 Score: 263 bits (671), Expect = 1.600e-83
Identity = 142/315 (45.08%), Postives = 193/315 (61.27%), Query Frame = 0
Query:    3 STDIFLGGEDSGVREVQVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRFTASGTVYVTDSFPLPHSESGEEVAVDTDYHKNMYDLHNRVNSAEELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKIDDLALSSEFRSIPVCMKPEKAEKVGLDVLFKNRRR-EEGDLTSP----------------------------VMASEIENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNASDFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKLLCVD 288
            ST+IFLGGE   VR  +VSPVVL ++LDH++RR  G   VIG LLG    +  V +   FP+ HS+S   VA+DTDY + M +LH +V   E +VGWY TG  TD  SV+ HEF+GR C  PVHLL+DA L S  F   AFV+TA+ IDDL +SSEFR + V ++   +EKVGL+ L ++++R E GD                                 M +E++ LE+S+ RL  +L+ +G  V+ V+ G ++GD   GR+L E L  VPR+NA+DFE++ GD+ RD LMV Y  KLTQTQL + EKLL ++
Sbjct:    4 STNIFLGGEGFDVRAGRVSPVVLLSILDHYMRRPIGSAPVIGALLGVIAENSCVEIRSCFPVSHSKSDNMVALDTDYFETMLELHQKVQPNESVVGWYGTGVATDANSVVFHEFFGRFCSTPVHLLIDASLESNAFHPRAFVTTAFSIDDLGISSEFREVAVEIQVSTSEKVGLEALAEDQKRIERGDYEDDDENEELXXXXXXXXXXXXXKLNKLRKKFAMPTEMDTLERSLARLRQILEIVGDEVERVINGSIQGDRRLGRYLNEALAEVPRVNAADFEQMIGDSYRDHLMVLYCAKLTQTQLAMTEKLLGIE 318          
BLAST of Ggra9223.t1 vs. uniprot
Match: A0A2K1KAK0 (Eukaryotic translation initiation factor 3 subunit F n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KAK0_PHYPA)

HSP 1 Score: 238 bits (607), Expect = 2.470e-74
Identity = 116/266 (43.61%), Postives = 181/266 (68.05%), Query Frame = 0
Query:   19 QVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRFTASGTVYVTDSFPLPHSESGEEVAVDTDYHKNMYDLHNRVNSAEELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKIDDLALSSEFRSIPVCMKPEKAEKVGLDVLFKNRRREEGDLTSPVMASEIENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNASDFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKL 284
            ++ P VLFN+ D +IRR + ++RVIGTLLG  +  GTV + +S+ +PHSE  ++VAVD DYH+ M++LH RVN  E +VGWY+TG+       +IH+FYGRE  NPV L VD   + E+ ++  FVST   + +  L+++F  + + ++  +AE++G DVL K    +        + +++E LE ++ERL D++D + + VD VV G+V+ D + GRFLA+T+  VPR+++  F++LF D+++DLL+V YL  LT+TQLI+AEKL
Sbjct:   20 KLHPTVLFNISDSYIRRNDQQERVIGTLLGSISPDGTVEIRNSYAVPHSEQADQVAVDIDYHRTMFELHQRVNHKEIIVGWYSTGSSLSPSDTLIHDFYGREVANPVLLTVDTAFAEEKVNIKVFVSTLLTLGERQLAAQFHEVQLDLRLIEAERIGFDVLKKTMVEK--------LPNDLEGLEATIERLQDMIDRVFRYVDDVVEGQVQPDNSVGRFLADTMASVPRISSDAFDKLFNDSVQDLLLVLYLANLTKTQLILAEKL 277          
BLAST of Ggra9223.t1 vs. uniprot
Match: A9NZE5 (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NZE5_PICSI)

HSP 1 Score: 235 bits (599), Expect = 3.980e-73
Identity = 118/266 (44.36%), Postives = 174/266 (65.41%), Query Frame = 0
Query:   19 QVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRFTASGTVYVTDSFPLPHSESGEEVAVDTDYHKNMYDLHNRVNSAEELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKIDDLALSSEFRSIPVCMKPEKAEKVGLDVLFKNRRREEGDLTSPVMASEIENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNASDFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKL 284
            ++ P VLFN+ D F+RR +   RVIGTLLG  +A GTV + +S+ +PH+ES ++VAVD DYH+ MYDLH RVN  E ++GWY+TG      S +I +FY RE  NPVHL VD    +E+  + A+VST   + D  L+++F  IP+ ++  +AE+VG DVL K             + +++E LE +M+ L  L++ + K VD VV G+V  D T GR+L +T+  +P+M+   F++LF D+++DLL+V YL  LT+TQL +AEKL
Sbjct:   20 RLHPTVLFNICDSFVRRNDQSDRVIGTLLGSISADGTVDIRNSYSVPHNESSDQVAVDIDYHRTMYDLHQRVNPKEVIIGWYSTGAGVSGSSALIQDFYAREVTNPVHLTVDTSFLNEQATIKAYVSTTISLGDRQLAAQFHEIPLDLRMVEAERVGYDVLKKT--------IVDKLPNDLEGLEATMQGLHALIEDVFKYVDDVVRGQVAPDQTVGRYLMDTMATIPKMSPDAFDKLFNDSIQDLLLVNYLAGLTRTQLCLAEKL 277          
BLAST of Ggra9223.t1 vs. uniprot
Match: A0A0U9HHQ1 (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HHQ1_KLENI)

HSP 1 Score: 234 bits (598), Expect = 5.450e-73
Identity = 115/266 (43.23%), Postives = 182/266 (68.42%), Query Frame = 0
Query:   19 QVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRFTASGTVYVTDSFPLPHSESGEEVAVDTDYHKNMYDLHNRVNSAEELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKIDDLALSSEFRSIPVCMKPEKAEKVGLDVLFKNRRREEGDLTSPVMASEIENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNASDFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKL 284
            ++ PVVLFN+ D +IRR EG++RVIGTLLG  ++ GTV + +S+ +PH E+ +EVAVD D+H+ M+DLH++VN  E +VGWY+TG    +   +I +FY RE  N + L VD   ++E+  + AFVST  ++ D  L+++F  I + ++  +AE+VG +VL + +        +  + +EIE LE ++ERL  ++DT+ + V+ VV G++  D T GR+LA+T+ +VPR+N   F+ LF D+++D+L+V YL  LT+TQL +AEKL
Sbjct:   19 KLHPVVLFNISDAYIRRNEGQERVIGTLLGTVSSDGTVEIKNSYAVPHKETSDEVAVDIDFHQRMFDLHHQVNPKEAIVGWYSTGAGVSVSDALIQDFYSREANNAILLTVDTAFTTEKLKLKAFVSTPVQLGDRQLAAQFHEIQLDLRLVEAERVGFEVLKETQ--------TDRLPNEIEGLEATVERLRGMVDTVAQYVNKVVDGKIPADNTIGRYLADTVAVVPRINPESFDSLFNDSVQDMLLVLYLANLTRTQLALAEKL 276          
BLAST of Ggra9223.t1 vs. uniprot
Match: A0A0D6R1D0 (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R1D0_ARACU)

HSP 1 Score: 234 bits (596), Expect = 1.130e-72
Identity = 114/266 (42.86%), Postives = 177/266 (66.54%), Query Frame = 0
Query:   19 QVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRFTASGTVYVTDSFPLPHSESGEEVAVDTDYHKNMYDLHNRVNSAEELVGWYATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKIDDLALSSEFRSIPVCMKPEKAEKVGLDVLFKNRRREEGDLTSPVMASEIENLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNASDFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKL 284
            ++ P VLFN+ D ++RR++   RVIGTLLG  +A GTV + +S+ +PH+ES E+VA+D DYH++MY+LH RVN  E ++GWY+TG      S +I +FY RE  NPVHL VD   ++    + A+VST   + D  L+++F  IP+ ++  +AE+VG DVL K             + +++E LE +MERL+ L++ + K VD VV G+++ D   GR+L +T+  +P+++   F++LF D+++DLL+V YL  LT+TQL +AEKL
Sbjct:   20 KLHPTVLFNICDSYVRRSDQADRVIGTLLGSVSADGTVDIRNSYCVPHNESSEQVALDIDYHRSMYELHQRVNPKEVIIGWYSTGAGVSGSSALIQDFYAREVTNPVHLTVDTAFTNNEASIKAYVSTTLSLGDRQLAAQFHEIPLDLRMIEAERVGFDVLKKT--------IVDKLPNDLEGLEATMERLVVLIEDVFKYVDGVVQGQIDPDNNVGRYLMDTMAAIPKISPDAFDKLFNDSIQDLLLVVYLAGLTKTQLTLAEKL 277          
The following BLAST results are available for this feature:
BLAST of Ggra9223.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IP521.380e-19995.90Eukaryotic translation initiation factor 3 subunit... [more]
R7QK057.650e-16179.05Eukaryotic translation initiation factor 3 subunit... [more]
A0A1X6P9F21.360e-10250.75MPN domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A7S1THB65.390e-10152.94Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YZS31.630e-8544.78Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S0ZD641.600e-8345.08Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A2K1KAK02.470e-7443.61Eukaryotic translation initiation factor 3 subunit... [more]
A9NZE53.980e-7344.36Eukaryotic translation initiation factor 3 subunit... [more]
A0A0U9HHQ15.450e-7343.23Eukaryotic translation initiation factor 3 subunit... [more]
A0A0D6R1D01.130e-7242.86Eukaryotic translation initiation factor 3 subunit... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 199..219
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 8..185
e-value: 1.1E-45
score: 157.2
NoneNo IPR availablePANTHERPTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDcoord: 14..284
IPR000555JAB1/MPN/MOV34 metalloenzyme domainSMARTSM00232pad1_6coord: 17..148
e-value: 6.7E-23
score: 92.1
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 14..117
e-value: 7.0E-22
score: 77.6
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 171..283
e-value: 2.6E-17
score: 63.2
IPR027531Eukaryotic translation initiation factor 3 subunit FPANTHERPTHR10540:SF6EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Fcoord: 14..284
IPR027531Eukaryotic translation initiation factor 3 subunit FHAMAPMF_03005eIF3fcoord: 16..287
score: 33.006565
IPR027531Eukaryotic translation initiation factor 3 subunit FCDDcd08064MPN_eIF3fcoord: 18..284
e-value: 1.46791E-109
score: 316.455
IPR037518MPN domainPROSITEPS50249MPNcoord: 18..149
score: 25.914799

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:421212..422093 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9223.t1Ggra9223.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 421212..422093 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9223.t1 ID=Ggra9223.t1|Name=Ggra9223.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=294bp
MESTDIFLGGEDSGVREVQVSPVVLFNVLDHFIRRTEGKKRVIGTLLGRF
TASGTVYVTDSFPLPHSESGEEVAVDTDYHKNMYDLHNRVNSAEELVGWY
ATGTETDLKSVIIHEFYGRECVNPVHLLVDAELSSERFDMSAFVSTAYKI
DDLALSSEFRSIPVCMKPEKAEKVGLDVLFKNRRREEGDLTSPVMASEIE
NLEKSMERLLDLLDTIGKNVDAVVAGEVEGDVTTGRFLAETLTMVPRMNA
SDFERLFGDNMRDLLMVAYLCKLTQTQLIVAEKLLCVDTTPKY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000555JAMM/MPN+_dom
IPR024969Rpn11/EIF3F_C
IPR027531eIF3f
IPR037518MPN