Ggra9134.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9134.t1
Unique NameGgra9134.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length281
Homology
BLAST of Ggra9134.t1 vs. uniprot
Match: A0A2V3IHS8 (R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHS8_9FLOR)

HSP 1 Score: 367 bits (943), Expect = 1.350e-125
Identity = 186/281 (66.19%), Postives = 227/281 (80.78%), Query Frame = 0
Query:    1 MFAFAPSTALTPARVATSGSSFTPSVTPASPARKHHAAPTMALRR-SLVKPIGLPVSAFGGAAAILNKADEYMAKSVLKQYLQMSQPSGVYGVQCTEGSVKGAAEVTRIRALNARFRARQASPFKKYGDLYENRKNAIAADHICQYEESLFTSYPKMSSTYNLARAEASATCPRYGAPETIEEAAMMRFMDIQQNNAANPSGVYNTSCNEGAAKGQAEDIRIAALNVAYRNGQKPIGQLLNEKYQQKKFGYIQCHGCNYEESLVSKYPAVGASFRSRSYGY 280
            MFAFAPS ++T AR     +SFT S+TP  P R  +A  +MALR  S V+ +    +A   A+ IL KA +YMA SVL QY  ++ P+G YGVQCTEGSVKGAAE  R+RAL+  FRARQ  PFKKY DLYENRKNAIAADHICQYEE+LF+ YP +++TYN+AR EA+  C RY  PE++EEAAM+R+MDIQQNNAANPSGVYN+SCNEGAAKGQ+E +RIAALNVAYRN QKP+ Q+L EKY+QKK+GY+QCHGCNYEESLVSK+PA+GA+FR+++YGY
Sbjct:    1 MFAFAPSVSVTAARTTLPSTSFTTSLTPHRPNR--NATTSMALRSPSSVRSVRSVAAA--RASDILAKAADYMANSVLYQYYNIANPTGEYGVQCTEGSVKGAAEAARVRALSTAFRARQVGPFKKYFDLYENRKNAIAADHICQYEETLFSRYPSVAATYNVARNEANGACSRYATPESVEEAAMLRYMDIQQNNAANPSGVYNSSCNEGAAKGQSEHLRIAALNVAYRNAQKPLAQILQEKYEQKKYGYVQCHGCNYEESLVSKFPAIGAAFRAKTYGY 277          
BLAST of Ggra9134.t1 vs. uniprot
Match: R7QDA3 (Gamma 31 kDa subunit of phycoerythrin n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDA3_CHOCR)

HSP 1 Score: 320 bits (821), Expect = 5.960e-107
Identity = 168/289 (58.13%), Postives = 208/289 (71.97%), Query Frame = 0
Query:    1 MFAFAPSTALTPARVATSGSSFTPSVTPASPARKH---HAAPTMALRRSLVKPIGLP------VSAFGGAAAILNKADEYMAKSVLKQYLQMSQPSGVYGVQCTEGSVKGAAEVTRIRALNARFRARQASPFKKYGDLYENRKNAIAADHICQYEESLFTSYPKMSSTYNLARAEASATCPRYGAPETIEEAAMMRFMDIQQNNAANPSGVYNTSCNEGAAKGQAEDIRIAALNVAYRNGQKPIGQLLNEKYQQKKFGYIQCHGCNYEESLVSKYPAVGASFRSRSYGY 280
            M AFAP+++      AT+  S   S T A    +    H APTM LR SL KP+G         S FGGAAAIL+KAD YMA+S+L QY +++ P+GVYGVQCTEG  K  A+ +RIRALNARFRARQAS  + Y  L+ENRK AI + H C +EE+ F+ Y  ++++YN++RAEA  +C RY  PET+EEAA++RFMDIQQ  AANPSGVYN +CNEGAAK QAED R+AALN AYRNGQK  G+LL EKY Q+K GY   HGCNYEE LV+ YPA+GA+FR ++YGY
Sbjct:    1 MLAFAPTSSF-----ATAKPSLATSFTSAPVCHRRAATHTAPTMILRTSLRKPVGSSSAFVGMASGFGGAAAILSKADTYMAQSILMQYYKVANPAGVYGVQCTEGGSKHMADFSRIRALNARFRARQASKAQAYARLFENRKMAIVSSHECHHEETQFSQYANVAASYNVSRAEALGSCSRYATPETVEEAALLRFMDIQQTTAANPSGVYNVACNEGAAKFQAEDCRVAALNAAYRNGQKSAGKLLQEKYDQRKKGYAATHGCNYEEGLVNNYPALGATFRPKTYGY 284          
BLAST of Ggra9134.t1 vs. uniprot
Match: A0A291FEC5 (LR gamma5 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEC5_GRIPA)

HSP 1 Score: 319 bits (818), Expect = 1.760e-106
Identity = 168/286 (58.74%), Postives = 207/286 (72.38%), Query Frame = 0
Query:    1 MFAFAPSTALTPARVATSGSSFTPSVTPASPARKHHAAPTMALRRSLVKPIGLPVSAF------GGAAAILNKADEYMAKSVLKQYLQMSQPSGVYGVQCTEGSVKGAAEVTRIRALNARFRARQASPFKKYGDLYENRKNAIAADHICQYEESLFTSYPKMSSTYNLARAEASATCPRYGAPETIEEAAMMRFMDIQQNNAANPSGVYNTSCNEGAAKGQAEDIRIAALNVAYRNGQKPIGQLLNEKYQQKKFGYIQCHGCNYEESLVSKYPAVGASFRSRSYGY 280
            M+AFAP+T  T ++     +SFT S  PA    +  AAPTM LR  L  P+    +        G  + IL KADEYMAKSV KQYL  S P G +GVQCTEGSVK AA+ +RIRALNA FRA+  S  KK  D+YENRKNAI+  H C +EE+ F  Y  +SS YN++++EAS +C RY +PET+ EAAM+RFMDIQ   AANP+GVYN SCNEGAA+GQAED+R+AALN A+R GQK +G+LL+EKYQQKK GY   HGCNYEE L++KYPA+GA+FRS+SYGY
Sbjct:    1 MYAFAPNTPFTASKAVVGKTSFT-SPLPAQSESRPTAAPTMVLRTVLRSPVPSGAATVYGYVGRGNISVILAKADEYMAKSVRKQYLAKSNPYGTFGVQCTEGSVKFAADFSRIRALNAEFRAKLGSASKKTFDMYENRKNAISNSHGCHHEETQFVGYKGVSSMYNVSKSEASGSCSRYASPETVVEAAMLRFMDIQVKMAANPTGVYNISCNEGAARGQAEDVRVAALNAAFRQGQKSLGKLLDEKYQQKKQGYSFAHGCNYEEGLINKYPALGAAFRSKSYGY 285          
BLAST of Ggra9134.t1 vs. uniprot
Match: P92928 (Gamma 31 kDa subunit of phycoerythrin n=1 Tax=Aglaothamnion neglectum TaxID=2765 RepID=P92928_AGLNE)

HSP 1 Score: 301 bits (772), Expect = 1.420e-99
Identity = 162/283 (57.24%), Postives = 203/283 (71.73%), Query Frame = 0
Query:    1 MFAFAPSTALTPA-RVATSGSSFTPSVTPAS--PARKHHAAPTMALRRSLVKPIGLPVSAFGGAAAILNKADEYMAKSVLKQYLQMSQPSGVYGVQCTEGSVKGAAEVTRIRALNARFRARQASPFKKYGDLYENRKNAIAADHICQYEESLFTSYPKMSSTYNLARAEASATCPRYGAPETIEEAAMMRFMDIQQNNAANPSGVYNTSCNEGAAKGQAEDIRIAALNVAYRNGQKPIGQLLNEKYQQKKFGYIQCHGCNYEESLVSKYPAVGASFRSRSYGY 280
            M AFAPSTAL  + + AT G+  TP  TP +   A    +APTM LR SL  PI    S +G  ++I++KAD YMA+ V KQYL M+ P G +GVQCTEGSVK AAEV R+R+L+A +R + +SP K   D+YENRK AI A H C YEE  F  Y K++STYN A++EA+ TC +Y +PET+EEAAM+R+MDI QNN ANPSGVYN SCNEG+ +GQAEDIR+AALN  YR  QK   +L++EKYQQKK GY   HGC YEE L+S Y A+GA+FR +SY +
Sbjct:    1 MAAFAPSTALVASTKPATIGA--TPFATPLANRSAAVKSSAPTMVLRTSLRAPIET-FSVYGTYSSIMSKADTYMAQCVKKQYLAMANPMGTFGVQCTEGSVKFAAEVARVRSLSADYRQKMSSPSKAAFDMYENRKAAIVAAHGCHYEEGYFVDYKKVTSTYNTAKSEAAGTCFKYASPETVEEAAMVRYMDITQNNFANPSGVYNMSCNEGSVRGQAEDIRVAALNAQYRQAQKSTNKLMDEKYQQKKAGYAAAHGCTYEEGLISTYAAIGAAFRPKSYHF 280          
BLAST of Ggra9134.t1 vs. uniprot
Match: A0A5J4YX19 (R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX19_PORPP)

HSP 1 Score: 214 bits (546), Expect = 2.990e-65
Identity = 109/221 (49.32%), Postives = 143/221 (64.71%), Query Frame = 0
Query:   61 AAAILNKADEYMAKSVLKQYLQMSQPSGVYGVQCTEGSVKGAAEVTRIRALNARFRARQASPFKKYGDLYENRKNAIAADHICQYEESLFTSYPKMSSTYNLARAEASATCPRYGAPETIEEAAMMRFMDIQQNNAANPSGVYNTSCNEGAAKGQAEDIRIAALNVAYRNGQKPIGQLLNEKYQQKKFGYIQ-CHGCNYEESLVSKYPAVGASFRSRSYGY 280
            A  IL KADE+ A+SV  QY   + P+GVY +QCTEG+VKGAA   R  A++A FRA+QASP  K   L+ENR++AI A H CQ+EE LF  +PK+S+ Y + + EA  TC RY  P+++EE  M   +D Q    A P GVY +SC EG AKGQAE  R+AAL  A+R+ QK   +   E+Y    +G     HGC+YEES+ + YPA  A+ RS+SY Y
Sbjct:   70 AKKILEKADEFFARSVTMQYKAFACPNGVYDIQCTEGTVKGAAYEKRAMAVSAAFRAKQASPAAKARALFENRRHAIIASHECQHEEDLFVRFPKLSAAYMMGKTEAMRTCSRYVVPDSLEEEYMAASVDRQMKERACPGGVYASSCVEGNAKGQAEQARVAALATAFRSAQKSASKTTAERYSSAAYGRDHFAHGCSYEESVFNTYPATAAAMRSKSYNY 290          
BLAST of Ggra9134.t1 vs. uniprot
Match: A0A5J4YZM7 (R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZM7_PORPP)

HSP 1 Score: 206 bits (525), Expect = 2.610e-62
Identity = 105/216 (48.61%), Postives = 135/216 (62.50%), Query Frame = 0
Query:   66 NKADEYMAKSVLKQYLQMSQPSGVYGVQCTEGSVKGAAEVTRIRALNARFRARQASPFKKYGDLYENRKNAIAADHICQYEESLFTSYPKMSSTYNLARAEASATCPRYGAPETIEEAAMMRFMDIQQNNAANPSGVYNTSCNEGAAKGQAEDIRIAALNVAYRNGQKPIGQLLNEKYQQKKFGYIQ-CHGCNYEESLVSKYPAVGASFRSRSYGY 280
            NK DEYMA+SV +QY Q +  +GVYG QCTEG+VKGAAE +R  AL+ +FR +Q S F K  DL+E RK+AI A   C YEE + T +PK+++   L + E   TC RY  PE++EE  M   +D Q      P GVY+ SC EG AKGQAE  R++AL  AYR   K    +  E+Y    +G +   HGC+YEE   +KYPA  A+ RS SYGY
Sbjct:   58 NKVDEYMARSVQRQYKQAAVATGVYGTQCTEGTVKGAAEASRSAALSRQFRIKQRSAFSKAHDLFEFRKHAIIAAAGCSYEEKMVTRFPKLAAAMVLGQTEMMRTCSRYVVPESVEEEYMAASVDKQMKRRGAPGGVYSLSCAEGVAKGQAEIARVSALGAAYRAASKSASAVTAERYNSMAYGRVHFAHGCSYEEQQFNKYPAAAAAMRSDSYGY 273          
BLAST of Ggra9134.t1 vs. uniprot
Match: Q7XYZ7 (Phycoerythrin 31 kDa gamma subunit (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYZ7_GRIJA)

HSP 1 Score: 197 bits (500), Expect = 2.180e-59
Identity = 111/211 (52.61%), Postives = 144/211 (68.25%), Query Frame = 0
Query:   10 LTPARVATSGSSFTPSVTPASPARKHHAAPTMALRRSLVKPIGL-PVSAFG-----GAAAILNKADEYMAKSVLKQYLQMSQPSGVYGVQCTEGSVKGAAEVTRIRALNARFRARQASPFKKYGDLYENRKNAIAADHICQYEESLFTSYPKMSSTYNLARAEASATCPRYGAPETIEEAAMMRFMDIQQNNAANPSGVYNTSCNEGAAKG 214
            LT A+ A   S+FT S  PA       AAPTM LR +L  P+     + FG       A+IL+KAD YMA SV KQYL  S P GV+ VQCTEGSVK AA+ +R+RALN  +R +  S  KK  D++E+RK+AIA  H C +EE+ F +Y KM+S YN++++EA  +C RY +PET+ EAAM+RFMDIQ   AANP+GVY++SCNEGAA+G
Sbjct:    1 LTVAKPAVGSSAFT-SPLPAHTESAPSAAPTMVLRTTLRSPMSSGSATVFGYVGKANIASILSKADAYMAMSVRKQYLAKSNPFGVFNVQCTEGSVKFAADFSRVRALNLNYRTQAYSASKKTMDMFESRKSAIANSHGCHHEETQFVAYKKMTSMYNVSKSEALGSCSRYASPETVTEAAMLRFMDIQMKQAANPTGVYSSSCNEGAARG 210          
BLAST of Ggra9134.t1 vs. uniprot
Match: A0A7S0ZID6 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZID6_9RHOD)

HSP 1 Score: 199 bits (507), Expect = 2.950e-59
Identity = 107/221 (48.42%), Postives = 134/221 (60.63%), Query Frame = 0
Query:   61 AAAILNKADEYMAKSVLKQYLQMSQPSGVYGVQCTEGSVKGAAEVTRIRALNARFRARQASPFKKYGDLYENRKNAIAADHICQYEESLFTSYPKMSSTYNLARAEASATCPRYGAPETIEEAAMMRFMDIQQNNAANPSGVYNTSCNEGAAKGQAEDIRIAALNVAYRNGQKPIGQLLNEKYQQKKFGY-IQCHGCNYEESLVSKYPAVGASFRSRSYGY 280
            A   L+KADE+ A+SV  QY   + P G Y  QCTEGSVKGAA   R  AL+A FR++Q SP +K  + +E RK A+ A   C +EE +F  YPK++  Y L  AEA  TC RY  PETI E  M   +D        P+GVY++SC EG AKGQAE  R+AAL  AYR+  K   Q   EK+   K+   +  HGCN+EE + +KYPAV A  RS SYGY
Sbjct:   80 AGKTLDKADEFFARSVTMQYKAYAAPYGTYTPQCTEGSVKGAAFEKRAMALSAAFRSKQKSPGQKAFEKFEMRKMAVIAAAGCDHEEKMFLKYPKLAKAYVLGSAEAMRTCQRYAVPETIAEEYMAAALDKVNKMRGAPNGVYSSSCVEGNAKGQAEQARVAALATAYRSAMKSTSQFEAEKFASSKYARDMFAHGCNHEEKIFNKYPAVAAGMRSVSYGY 300          
BLAST of Ggra9134.t1 vs. uniprot
Match: A0A1X6PKI7 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKI7_PORUM)

HSP 1 Score: 189 bits (479), Expect = 2.560e-55
Identity = 102/238 (42.86%), Postives = 139/238 (58.40%), Query Frame = 0
Query:   37 AAPTMALRRSLVKPIGLPVSAFGGAAAILNKADEYMAKSVLKQYLQMSQPSGVYGVQCTEGSVKGAAEVTRIRALNARFRARQASPFKKYGDLYENRKNAIAADHICQYEESLFTSYPKMSSTYNLARAEASATCPRYGAPETIEEAAMMRFMDIQQNNAANPSGVYNTSCNEGAAKGQAEDIRIAALNVAYRNGQKPIGQLLNEKYQQKKFGYIQCHGCNYEESLVSKYPAVGASFR 274
            A PTM L   + K  G   +  G  A I +K+D+Y+A+++ +QY +++   GVY VQCTEGSV G AE  RI A    FR  Q +P +KYGDLY  R  +I   H C  EE +  + P+ +++Y + + EA   C RY  PE+ EE  +   +  Q   A  P GV+ T C +G  KGQAE++R+AALN +YR  Q   G L  +KY Q  FG  Q +GCNYEE L + YPA  ASF+
Sbjct:   39 AGPTMLLAARVRKVSGGFSTKGGSYAQIASKSDKYLAQTINQQYKRVAAAGGVYNVQCTEGSVSGMAEYKRIAAKTRAFRDLQKTPSQKYGDLYAMRSASIQVAHGCHTEEKMLVNNPQAAASYVVGQREAMRQCVRYATPESTEENYIASKVQDQMLKAVAPYGVF-TRCTDGTVKGQAEEMRVAALNASYRTQQASAGTLAQQKYNQSAFGRSQANGCNYEECLCTTYPAAAASFQ 275          
BLAST of Ggra9134.t1 vs. uniprot
Match: R7Q9W8 (R-phycoerythrin gamma subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9W8_CHOCR)

HSP 1 Score: 127 bits (320), Expect = 2.630e-31
Identity = 75/216 (34.72%), Postives = 112/216 (51.85%), Query Frame = 0
Query:   59 GGAAAILNKADEYMAKSVLKQYLQMSQPSGVYGVQCTEGSVKGAAEVTRIRALNARFRARQASPFKKYGDLYENRKNAIAADHICQYEESLFTSYPKMSSTYNLARAEASATCPRYGAPETIEEAAMMRFMDIQQNNAANPSGVYNTS-CNEGAAKGQAEDIRIAALNVAYRNGQKPIGQLLNEKYQQKKFGY-IQCHGCNYEESLVSKYPAVGAS 272
            GGAA IL K DEY AK +++ Y + + P G Y  +C EG+V   A   R+      FR  Q     +  + YE R+      + C  EE+ F + P  ++T+   RAEA  TC R   P TI E  M   +  Q    A+P G+Y    C +G AKG AE+ R+AAL+  YR+ Q+    +  ++Y+  +    +  H C++EE  + +YPAV A+
Sbjct:   98 GGAAKILMKYDEYCAKGMMQTYKRSAVPFGTYTTKCAEGTVPQQAFDKRVFNRTNAFRQAQKPVNVRLREQYEARRACFILANGCDREEAQFKNMPMSAATFLAGRAEAMGTCYRNVTPSTIAEDYMADGVRAQLTQKAHPYGLYRVGVCEDGHAKGDAEERRVAALSAEYRSNQQSPAAVTGQQYESARTARKLYAHDCHHEEEQIFQYPAVAAA 313          
The following BLAST results are available for this feature:
BLAST of Ggra9134.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2V3IHS81.350e-12566.19R-phycoerythrin gamma chain, chloroplastic n=1 Tax... [more]
R7QDA35.960e-10758.13Gamma 31 kDa subunit of phycoerythrin n=1 Tax=Chon... [more]
A0A291FEC51.760e-10658.74LR gamma5 n=1 Tax=Griffithsia pacifica TaxID=35689... [more]
P929281.420e-9957.24Gamma 31 kDa subunit of phycoerythrin n=1 Tax=Agla... [more]
A0A5J4YX192.990e-6549.32R-phycoerythrin gamma chain, chloroplastic n=1 Tax... [more]
A0A5J4YZM72.610e-6248.61R-phycoerythrin gamma chain, chloroplastic n=1 Tax... [more]
Q7XYZ72.180e-5952.61Phycoerythrin 31 kDa gamma subunit (Fragment) n=1 ... [more]
A0A7S0ZID62.950e-5948.42Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6PKI72.560e-5542.86Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7Q9W82.630e-3134.72R-phycoerythrin gamma subunit n=1 Tax=Chondrus cri... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..280
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:73073..73915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9134.t1Ggra9134.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 73073..73915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9134.t1 ID=Ggra9134.t1|Name=Ggra9134.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=281bp
MFAFAPSTALTPARVATSGSSFTPSVTPASPARKHHAAPTMALRRSLVKP
IGLPVSAFGGAAAILNKADEYMAKSVLKQYLQMSQPSGVYGVQCTEGSVK
GAAEVTRIRALNARFRARQASPFKKYGDLYENRKNAIAADHICQYEESLF
TSYPKMSSTYNLARAEASATCPRYGAPETIEEAAMMRFMDIQQNNAANPS
GVYNTSCNEGAAKGQAEDIRIAALNVAYRNGQKPIGQLLNEKYQQKKFGY
IQCHGCNYEESLVSKYPAVGASFRSRSYGY*
back to top