Ggra9124.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9124.t1
Unique NameGgra9124.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length455
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:52055..53419 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog45157.CMS096CT
PFAMsATP-sulfurylase,PUA_2
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078,RC02809,RC02889
KEGG koko:K00958,ko:K13811
KEGG ReactionR00509,R00529,R04928,R04929
KEGG Pathwayko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130
KEGG ModuleM00176,M00596
GOsGO:0000103,GO:0001887,GO:0003674,GO:0003824,GO:0004020,GO:0004779,GO:0004781,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006790,GO:0006793,GO:0006796,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009719,GO:0009725,GO:0009735,GO:0009970,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0022607,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0050896,GO:0051259,GO:0051716,GO:0065003,GO:0070206,GO:0070566,GO:0071496,GO:0071840,GO:0071944
Evalue5.07e-200
EggNOG OGsCOG2046@1|root,KOG0636@2759|Eukaryota
EC2.7.1.25,2.7.7.4
Descriptionsulfate adenylyltransferase (ATP) activity
COG categoryP
BRITEko00000,ko00001,ko00002,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9124Ggra9124Gracilaria gracilis GNS1m malegenetig00000075_pilon 52055..53419 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9124.t1.stop1Ggra9124.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000075_pilon 52055..52057 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9124.t1.CDS1Ggra9124.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000075_pilon 52055..53419 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9124.t1.exon1Ggra9124.t1.exon1Gracilaria gracilis GNS1m maleexontig00000075_pilon 52055..53419 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9124.t1.start1Ggra9124.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000075_pilon 53417..53419 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9124.t1Ggra9124.t1Gracilaria gracilis GNS1m malepolypeptidetig00000075_pilon 52055..53419 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9124.t1 ID=Ggra9124.t1|Name=Ggra9124.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=455bp
MTLGFAFSSPIVRPAVASTTVSSSSTSSFVSTPAVSHRVQGLRKKAPVQA
TVAPPTAVVDEVVELLVPVAQRPAKLAEAQTLPSVTVTDVDMQWIHVLAE
GWASPLKGFMRESEYLQSQHFNAIRMPDGSLSNMSIPIVLAIDDEQKAQL
EGKAAFALKSPEGEIVAIMRNFETYVHNKEERCARTFGITDDRHPYTRFI
YESGDHLVGGDLEVLKDIKYNDGLDEYRLTPRQLREEYKKKNADAVFVFQ
LRNPIHNGHALLMTACREELIARGFKNPVLLVHQIGGKVKGDDIPLDVRI
KQNKRVLAEGVLDPNSTLLGIFPSPMLYAGPTEVQWHAKARMNAGCQYYI
VGRDPAGMKHPNGERDMFDAWHGKNVLGMAPGLEKLEILPFRVAAYDKTV
GQMSFFDPSRADDFLFISGTKMRKFASSGETPPDGFMAPTAWKVLVDYYA
AKKQ*
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spliced messenger RNA

>Ggra9124.t1 ID=Ggra9124.t1|Name=Ggra9124.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1365bp|location=Sequence derived from alignment at tig00000075_pilon:52055..53419- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTCTTGGATTTGCTTTCTCGTCACCGATCGTCCGGCCGGCAGTCGC
CTCTACGACAGTTTCCTCGTCGTCGACCTCGTCTTTTGTCTCTACACCCG
CAGTTTCGCACCGTGTCCAAGGTCTCCGGAAAAAGGCTCCTGTTCAGGCC
ACAGTTGCTCCACCAACTGCTGTCGTTGATGAAGTCGTTGAGCTTCTCGT
CCCTGTGGCACAACGCCCTGCAAAGCTGGCTGAAGCCCAGACTTTGCCGT
CCGTAACTGTCACTGACGTTGACATGCAATGGATTCATGTCCTTGCGGAA
GGATGGGCTAGTCCTCTGAAGGGCTTCATGCGGGAGAGCGAGTATTTGCA
GAGTCAGCATTTCAACGCAATCCGCATGCCGGATGGCTCGTTGAGCAACA
TGAGCATTCCAATCGTGCTTGCTATTGATGATGAACAGAAGGCACAGTTG
GAAGGCAAGGCCGCATTTGCTCTCAAGTCTCCAGAGGGCGAAATTGTTGC
TATTATGAGGAACTTCGAAACCTATGTTCATAATAAGGAGGAGCGTTGTG
CGCGTACATTTGGTATCACTGATGACCGACACCCGTACACCAGGTTCATT
TATGAGAGCGGAGACCACCTTGTTGGTGGCGACCTGGAGGTCCTCAAGGA
TATCAAGTACAATGATGGCCTTGACGAGTACCGACTCACACCCCGTCAGC
TAAGGGAGGAGTACAAGAAGAAGAACGCTGATGCTGTGTTTGTCTTCCAA
TTACGCAATCCCATTCACAATGGCCACGCACTCCTCATGACAGCTTGCAG
AGAAGAGCTCATCGCCCGTGGCTTCAAGAACCCAGTATTGCTGGTCCATC
AGATTGGAGGCAAGGTGAAAGGAGATGATATTCCTCTCGATGTCCGCATT
AAGCAGAACAAGCGTGTTCTAGCCGAAGGAGTTTTGGATCCGAACTCCAC
CTTGTTGGGAATTTTCCCAAGTCCTATGCTGTACGCCGGTCCAACAGAGG
TTCAATGGCACGCCAAGGCAAGAATGAACGCCGGGTGCCAATACTACATT
GTCGGCCGTGATCCTGCCGGTATGAAGCATCCTAATGGAGAAAGAGACAT
GTTTGATGCCTGGCATGGAAAGAATGTTCTTGGCATGGCCCCAGGACTTG
AAAAGCTTGAGATCCTTCCCTTCCGTGTTGCAGCTTATGACAAGACTGTT
GGACAAATGTCGTTCTTTGACCCATCCAGAGCTGATGACTTCTTATTCAT
TTCCGGCACGAAGATGCGTAAGTTTGCTTCCTCTGGTGAAACCCCCCCCG
ACGGCTTCATGGCTCCCACTGCATGGAAAGTTTTGGTTGATTACTACGCC
GCAAAGAAGCAATAG
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protein sequence of Ggra9124.t1

>Ggra9124.t1 ID=Ggra9124.t1|Name=Ggra9124.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=455bp
MTLGFAFSSPIVRPAVASTTVSSSSTSSFVSTPAVSHRVQGLRKKAPVQA
TVAPPTAVVDEVVELLVPVAQRPAKLAEAQTLPSVTVTDVDMQWIHVLAE
GWASPLKGFMRESEYLQSQHFNAIRMPDGSLSNMSIPIVLAIDDEQKAQL
EGKAAFALKSPEGEIVAIMRNFETYVHNKEERCARTFGITDDRHPYTRFI
YESGDHLVGGDLEVLKDIKYNDGLDEYRLTPRQLREEYKKKNADAVFVFQ
LRNPIHNGHALLMTACREELIARGFKNPVLLVHQIGGKVKGDDIPLDVRI
KQNKRVLAEGVLDPNSTLLGIFPSPMLYAGPTEVQWHAKARMNAGCQYYI
VGRDPAGMKHPNGERDMFDAWHGKNVLGMAPGLEKLEILPFRVAAYDKTV
GQMSFFDPSRADDFLFISGTKMRKFASSGETPPDGFMAPTAWKVLVDYYA
AKKQ*
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mRNA from alignment at tig00000075_pilon:52055..53419-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9124.t1 ID=Ggra9124.t1|Name=Ggra9124.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1365bp|location=Sequence derived from alignment at tig00000075_pilon:52055..53419- (Gracilaria gracilis GNS1m male)
ATGACTCTTGGATTTGCTTTCTCGTCACCGATCGTCCGGCCGGCAGTCGC
CTCTACGACAGTTTCCTCGTCGTCGACCTCGTCTTTTGTCTCTACACCCG
CAGTTTCGCACCGTGTCCAAGGTCTCCGGAAAAAGGCTCCTGTTCAGGCC
ACAGTTGCTCCACCAACTGCTGTCGTTGATGAAGTCGTTGAGCTTCTCGT
CCCTGTGGCACAACGCCCTGCAAAGCTGGCTGAAGCCCAGACTTTGCCGT
CCGTAACTGTCACTGACGTTGACATGCAATGGATTCATGTCCTTGCGGAA
GGATGGGCTAGTCCTCTGAAGGGCTTCATGCGGGAGAGCGAGTATTTGCA
GAGTCAGCATTTCAACGCAATCCGCATGCCGGATGGCTCGTTGAGCAACA
TGAGCATTCCAATCGTGCTTGCTATTGATGATGAACAGAAGGCACAGTTG
GAAGGCAAGGCCGCATTTGCTCTCAAGTCTCCAGAGGGCGAAATTGTTGC
TATTATGAGGAACTTCGAAACCTATGTTCATAATAAGGAGGAGCGTTGTG
CGCGTACATTTGGTATCACTGATGACCGACACCCGTACACCAGGTTCATT
TATGAGAGCGGAGACCACCTTGTTGGTGGCGACCTGGAGGTCCTCAAGGA
TATCAAGTACAATGATGGCCTTGACGAGTACCGACTCACACCCCGTCAGC
TAAGGGAGGAGTACAAGAAGAAGAACGCTGATGCTGTGTTTGTCTTCCAA
TTACGCAATCCCATTCACAATGGCCACGCACTCCTCATGACAGCTTGCAG
AGAAGAGCTCATCGCCCGTGGCTTCAAGAACCCAGTATTGCTGGTCCATC
AGATTGGAGGCAAGGTGAAAGGAGATGATATTCCTCTCGATGTCCGCATT
AAGCAGAACAAGCGTGTTCTAGCCGAAGGAGTTTTGGATCCGAACTCCAC
CTTGTTGGGAATTTTCCCAAGTCCTATGCTGTACGCCGGTCCAACAGAGG
TTCAATGGCACGCCAAGGCAAGAATGAACGCCGGGTGCCAATACTACATT
GTCGGCCGTGATCCTGCCGGTATGAAGCATCCTAATGGAGAAAGAGACAT
GTTTGATGCCTGGCATGGAAAGAATGTTCTTGGCATGGCCCCAGGACTTG
AAAAGCTTGAGATCCTTCCCTTCCGTGTTGCAGCTTATGACAAGACTGTT
GGACAAATGTCGTTCTTTGACCCATCCAGAGCTGATGACTTCTTATTCAT
TTCCGGCACGAAGATGCGTAAGTTTGCTTCCTCTGGTGAAACCCCCCCCG
ACGGCTTCATGGCTCCCACTGCATGGAAAGTTTTGGTTGATTACTACGCC
GCAAAGAAGCAATAG
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Coding sequence (CDS) from alignment at tig00000075_pilon:52055..53419-

>Ggra9124.t1 ID=Ggra9124.t1|Name=Ggra9124.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1365bp|location=Sequence derived from alignment at tig00000075_pilon:52055..53419- (Gracilaria gracilis GNS1m male)
ATGACTCTTGGATTTGCTTTCTCGTCACCGATCGTCCGGCCGGCAGTCGC
CTCTACGACAGTTTCCTCGTCGTCGACCTCGTCTTTTGTCTCTACACCCG
CAGTTTCGCACCGTGTCCAAGGTCTCCGGAAAAAGGCTCCTGTTCAGGCC
ACAGTTGCTCCACCAACTGCTGTCGTTGATGAAGTCGTTGAGCTTCTCGT
CCCTGTGGCACAACGCCCTGCAAAGCTGGCTGAAGCCCAGACTTTGCCGT
CCGTAACTGTCACTGACGTTGACATGCAATGGATTCATGTCCTTGCGGAA
GGATGGGCTAGTCCTCTGAAGGGCTTCATGCGGGAGAGCGAGTATTTGCA
GAGTCAGCATTTCAACGCAATCCGCATGCCGGATGGCTCGTTGAGCAACA
TGAGCATTCCAATCGTGCTTGCTATTGATGATGAACAGAAGGCACAGTTG
GAAGGCAAGGCCGCATTTGCTCTCAAGTCTCCAGAGGGCGAAATTGTTGC
TATTATGAGGAACTTCGAAACCTATGTTCATAATAAGGAGGAGCGTTGTG
CGCGTACATTTGGTATCACTGATGACCGACACCCGTACACCAGGTTCATT
TATGAGAGCGGAGACCACCTTGTTGGTGGCGACCTGGAGGTCCTCAAGGA
TATCAAGTACAATGATGGCCTTGACGAGTACCGACTCACACCCCGTCAGC
TAAGGGAGGAGTACAAGAAGAAGAACGCTGATGCTGTGTTTGTCTTCCAA
TTACGCAATCCCATTCACAATGGCCACGCACTCCTCATGACAGCTTGCAG
AGAAGAGCTCATCGCCCGTGGCTTCAAGAACCCAGTATTGCTGGTCCATC
AGATTGGAGGCAAGGTGAAAGGAGATGATATTCCTCTCGATGTCCGCATT
AAGCAGAACAAGCGTGTTCTAGCCGAAGGAGTTTTGGATCCGAACTCCAC
CTTGTTGGGAATTTTCCCAAGTCCTATGCTGTACGCCGGTCCAACAGAGG
TTCAATGGCACGCCAAGGCAAGAATGAACGCCGGGTGCCAATACTACATT
GTCGGCCGTGATCCTGCCGGTATGAAGCATCCTAATGGAGAAAGAGACAT
GTTTGATGCCTGGCATGGAAAGAATGTTCTTGGCATGGCCCCAGGACTTG
AAAAGCTTGAGATCCTTCCCTTCCGTGTTGCAGCTTATGACAAGACTGTT
GGACAAATGTCGTTCTTTGACCCATCCAGAGCTGATGACTTCTTATTCAT
TTCCGGCACGAAGATGCGTAAGTTTGCTTCCTCTGGTGAAACCCCCCCCG
ACGGCTTCATGGCTCCCACTGCATGGAAAGTTTTGGTTGATTACTACGCC
GCAAAGAAGCAATAG
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