Ggra6458.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6458.t1
Unique NameGgra6458.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1043
Homology
BLAST of Ggra6458.t1 vs. uniprot
Match: A0A2V3J5E2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5E2_9FLOR)

HSP 1 Score: 635 bits (1639), Expect = 1.330e-208
Identity = 413/1014 (40.73%), Postives = 582/1014 (57.40%), Query Frame = 0
Query:   54 VKPISIACTPQTPKLLRPVPLSNKVLISFEDVEDASDSSDFSIRNLKECPSSFSQASGLSSRCEEATVTFSSTPEDGSSTITNGISNSISRSFSNGSCRNRKGDVNSEEFGQVVSICAENQKLEHGQVGVQVFRHDGGPEVDTNNSRDSRDEILTGKPLQARRTSFFSPEDMENIPPASIVSIESPSISYRSHSP------NPTPK----TSNQEAKPFVTPPAHFRSSKDDGSSDSRASETLSSAPSS-------RGDGSTRSPSFTSLKS-SDDHPDRTRYASISSSSSFKSDDIAAAGRESEQK-RDXXXXSREQKRVLRIFDRRQNSSENRDIMDNPWFQA---MAIESELEEYTGTLRPASYPPKAEQKGKRTKISKLGRSLKNQAKRKKSESEKDSDPICHDKKSIPTSVSRTSQ-DPSNSSKNVVDEELRHVLRKALAGKRRVDDVLECMMRVYTRPTDGVLQLLYKYFGSGKIVESAVKWITEELRVLQEDVSDKRRSKEVEAYIVLSRIYREILLHIFTTGPGTVKKAFLNNSKARSTLIRFLQKDVPQGRLELKSWTKTSISIFRIFNSCMMDHASDVVVYLTSKEGLLRSIVSKHICFPEVVSFVSKLCAADALSESSESHRRYGPPNPEGILLLAKENIVDTLAHVFVNSCDARSGNSSDLR-LDMQRNSLQCLKDISLKAVTMPKFGKTNCSMNAKQIKMLNTALDTIALYSATNHVQAGIEYSLRRINGNGTEREELSSLFERNYPLVHMLSLSTDLLDSVYRASESNNFAVRRTIGTVSTKNLEDVLLSRLDDLRDLLGRHSIKTVS-STQLSIIQLLRCLFASGKNNVWVYLSNKNVPELLLSVVEDNELRTLVHKAILECLVASLKRKEAVELHRQWVTCIGNHHGWTSEMRRITEEKKSRGHEDDHKRSSQIQCTYVQITSVLMDVANSVHKTNLDSFFTNHGVKVPFMRKLEVEITRKREVESKPCGGSKPEGATISVLACTEFLAARLNDVNAV 1042
            VKP        +PK+L+P+P++NKV ISF+D +        SI  L     SFS+ S +SS  +E                TN I     +  S GS +       SE+        + N+KL  G               +  N R     I     L AR+ S     D+++IPPASI SI +P IS R+  P      N T K     S++E       P   +S      +  R  +T    P S         +G T  PS  S    +  H +R+R +++  +S+ K     A G  +EQK +      +E KR L IFDR++ S  +    +NPWFQA   +A  + LE   G    +S   K   K KRTK+SK+ R+ K   K K         P   D  SIP+S S  S  +P   S  V DE L ++++  +  K+ +D+VL CMM VY+RP +  L  LYKYF +G  +ES+++WITEELR  +E+ S   RS+E+++Y ++SRIYR I+LH+F +G G VK+AFLNN+K RS L+ F +KD P+ +  L+SWT TS  IFR+FNS M+DH+SD+ VY+++K GLL SIV KH+  PE  SF++KLCAADALSES+++  RYG PN  GILLL KE ++D L  +FV SC    G  S +  L  Q NSL CLK++S++A T+PKFGK NCS N K IK LNT LD++ LYS  + ++  I+ +L  I+G+  + E   S  ERN PL  +LSL  DLL +V  ASES N A+RRT+G +  ++++ VLLS++D L +++ R S   ++ S++LSI++ LRCLFAS +   W  LS   V E LL V+E+N L T+ HKA+LEC+ AS+K+KEA  LH+QWV  +GNH GW +EM+R+ ++ +    E +  RS Q+ C Y++ITS+L+++A SVH  +L   F  +G+ + FM  LE  +   RE + K CGG +PE  T+SVLA  E LAARLNDVNAV
Sbjct:   54 VKPFGFVAAVHSPKILKPIPITNKVFISFDDDDVLGAEHMGSIEQLTNPTISFSETSRVSSHYDE----------------TNPIQPESEKRNSIGS-QQMPVPTFSEQNLVGKRQASINKKLSLGAGDFDHSAEHTNAGCELINIRSQEKGISQSTGLSARKLSSGI-RDIDSIPPASIQSIVTP-ISRRTPIPINANELNETDKGFDPLSDEECIAVSREPTPTKSLSPKRLNSCRELDTDHRTPLSTTHTHFLHNEG-THEPSMRSTTEVAGCHQNRSRDSTVPLTST-KPHQSTADGPPTEQKTKGRKQRPKEHKRTLYIFDRKKRSEGSYGSGENPWFQATPTLAKNTVLETDAGPSVSSSDVQKPALKEKRTKLSKISRAFKGYGKSKHLHRA----PSSSDTSSIPSSASNASSVEPLTFSVEVTDERLGNIIQDVVHRKKALDEVLNCMMHVYSRPAEDTLHHLYKYFATGTTMESSIRWITEELRTYEEEDSTGIRSEELKSYRMISRIYRAIVLHVFASGAGHVKRAFLNNTKMRSALLDFFEKDAPRAKSALRSWTDTSAGIFRLFNSFMVDHSSDLTVYISNKPGLLHSIVRKHVSIPEASSFIAKLCAADALSESTQNDLRYGAPNTNGILLLVKEKVLDALIEIFVESCTDFPGQHSHMTSLQRQSNSLWCLKELSIRAATIPKFGKNNCSFNGKLIKRLNTGLDSLTLYSYPDSMRTAIDQALAIISGSEEDDERPLSCHERNNPLTRILSLFADLLGAVLIASESKNIAIRRTVGRIDVRHVQHVLLSKVDALCEIVHRDSANGLTASSRLSILRALRCLFASSERKAWDTLSASRVSEHLLDVLEENRLSTMTHKAVLECVEASMKQKEARILHKQWVQALGNHQGWLNEMKRLAKKLEVEESETEQVRS-QLSCVYIEITSILINIAKSVHCKSLSEVFEENGMSLSFMGNLESAVLEIREAQRKSCGGPRPEAQTVSVLASVESLAARLNDVNAV 1041          
BLAST of Ggra6458.t1 vs. uniprot
Match: R7QGC5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGC5_CHOCR)

HSP 1 Score: 296 bits (758), Expect = 1.400e-83
Identity = 218/692 (31.50%), Postives = 336/692 (48.55%), Query Frame = 0
Query:  374 NPWFQAMAIESELEEYTGTLRPASYPPKAEQKGKRTKISKLGRS-LKNQAKRKKSESEKDSDPICHDKKSIPT----SVSRTSQD------PSNSSKNVVDEE----------LRHVLRKALAGKRRVDDVLECMMRVYTRPTDGVLQLLYKYFGSGKIVESAVKWITEELRVLQEDVSDKRRSKEVEAYIVLSRIYREILLHIFTTGPGTVKKAFLNNSKARSTLIRFLQKDVPQGRLELKSWTKTSISIFRIFNSCMMDHASDVVVYLTSKEGLLRSIVSKHICFPEVVSFVSKLCAADALSESSESHRRYGPPNPEGILLLAKENIVDTLAHVFVNSCDARSGNS-SDLRLDMQRNSLQCLKDISLKAVTMPKFGKTNCSMNAKQIKMLNTALDTIALYSATNHVQAGIEYSLRRINGNGTEREELSSLFERNYPLVHMLSLSTDLLDSVYRASESNNFAVRRTIGTVSTKNLEDVLLSRLDDLRDLLGR-HSIKTVSSTQLSIIQLLRCLFASGKNNVWVYLSNKNVPELLLSVVEDNELRTLVHKAILECLVASLKRKEAVELHRQWVTCIGNHHGWTSEMRRITEEKKSRGHEDDHKRSSQIQCTYVQITSVLMDVANSVHKTNLDSFFTNHGVKVPFMRKLEVEITRKREVESKPCGGSKPEGATISVLACTEFLAARLNDVNAV 1042
            NPWFQ  +  S   + +      S   +AE  G   K  K+ R  LK +  R+    EKD       K ++ T    S SR+SQD      PSN S+    +           L   LRKAL+ KRR++DVLE  + +  RP + +    YKY  S   VE  V  I           +     K   A I   R+Y E+L   +  GP  ++KA L+ +KA++ ++ FL ++        ++++     + ++  + + +  SDV  +L+  +G L S V   I   E   F+ +LCAA+ALS++     RYG PN  GI LL KE I D L  VF  SC+     + S  R  +Q  S+ CL ++S ++V +PKF K NCS + K IK LN AL  I L+         +  +L      G    +     + N   V +LS   +LLD V  A +S +   RRT+G ++TK+LE VLLS++  L  LL + H ++      L I+++ R LF S  ++  + L +  VPE +L  V  N+L +++H  ++EC+  SL+R+E+  LH +W+  + N  G   EM  + E K      +     S  + T V +  VL   + ++ +      F +      F+ K+EV + +        CGG KPEGA +SVLA  + LAA++NDV+AV
Sbjct:   58 NPWFQERSDPSPCPDISDDESGLSLAQEAEGVG--IKFEKVKRKRLKRKIARQIFSKEKDG------KNAVATNQGSSSSRSSQDILVPPSPSNDSQKTTSDVTVESIVSSAVLEKDLRKALSAKRRLEDVLERALVLRERPPEDLCSQFYKYLSSSTAVERGVTIILNG-----GFTASAASMKSSFAAIPKHRVYSELLSSAYVNGPSRLRKAVLSQTKAKAQILTFLTQNAGDLGSRTETYSFKVRCLVKVLAAILAESPSDVTDFLSGSQGCLHSFVRYQIRVAEAADFICQLCAANALSDAPGDGLRYGAPNAAGIALLRKEGISDLLVRVFEESCETSVAETDSSARWQLQVMSMGCLVELSKRSVVVPKFSKNNCSYSNKHIKSLNAALQNIDLFQNVERASRLLRAALSCAEKTGRGSGQAEQGKDCNAG-VCVLSSVAELLDMVSSAGDSKSVVTRRTVGKINTKDLERVLLSQIGVLCRLLDQGHEVEGRGRLSLEIVKVFRSLFESRSDDTRIALVDAGVPECVLRAVRKNKLCSILHGCVVECMAVSLRREESGRLHHEWLRAL-NKVGMLEEMASVLEGKCGTDKSEQEDAWSTYRSTLVDLGFVLCMFSQNLTRAAFRRLFESEQQYQTFIGKIEVGLGKVANSREGACGGPKPEGAVVSVLANADALAAKINDVDAV 734          
The following BLAST results are available for this feature:
BLAST of Ggra6458.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5E21.330e-20840.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGC51.400e-8331.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..459
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..462

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:174892..178020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6458.t1Ggra6458.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 174892..178020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6458.t1 ID=Ggra6458.t1|Name=Ggra6458.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1043bp
MFRPLSWNLNENAFVEQEKLDEIPTSGNPPRDSSANAEMMGQTRLGTLTQ
PNSVKPISIACTPQTPKLLRPVPLSNKVLISFEDVEDASDSSDFSIRNLK
ECPSSFSQASGLSSRCEEATVTFSSTPEDGSSTITNGISNSISRSFSNGS
CRNRKGDVNSEEFGQVVSICAENQKLEHGQVGVQVFRHDGGPEVDTNNSR
DSRDEILTGKPLQARRTSFFSPEDMENIPPASIVSIESPSISYRSHSPNP
TPKTSNQEAKPFVTPPAHFRSSKDDGSSDSRASETLSSAPSSRGDGSTRS
PSFTSLKSSDDHPDRTRYASISSSSSFKSDDIAAAGRESEQKRDRRRRSR
EQKRVLRIFDRRQNSSENRDIMDNPWFQAMAIESELEEYTGTLRPASYPP
KAEQKGKRTKISKLGRSLKNQAKRKKSESEKDSDPICHDKKSIPTSVSRT
SQDPSNSSKNVVDEELRHVLRKALAGKRRVDDVLECMMRVYTRPTDGVLQ
LLYKYFGSGKIVESAVKWITEELRVLQEDVSDKRRSKEVEAYIVLSRIYR
EILLHIFTTGPGTVKKAFLNNSKARSTLIRFLQKDVPQGRLELKSWTKTS
ISIFRIFNSCMMDHASDVVVYLTSKEGLLRSIVSKHICFPEVVSFVSKLC
AADALSESSESHRRYGPPNPEGILLLAKENIVDTLAHVFVNSCDARSGNS
SDLRLDMQRNSLQCLKDISLKAVTMPKFGKTNCSMNAKQIKMLNTALDTI
ALYSATNHVQAGIEYSLRRINGNGTEREELSSLFERNYPLVHMLSLSTDL
LDSVYRASESNNFAVRRTIGTVSTKNLEDVLLSRLDDLRDLLGRHSIKTV
SSTQLSIIQLLRCLFASGKNNVWVYLSNKNVPELLLSVVEDNELRTLVHK
AILECLVASLKRKEAVELHRQWVTCIGNHHGWTSEMRRITEEKKSRGHED
DHKRSSQIQCTYVQITSVLMDVANSVHKTNLDSFFTNHGVKVPFMRKLEV
EITRKREVESKPCGGSKPEGATISVLACTEFLAARLNDVNAV*
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