Ggra7902.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7902.t1
Unique NameGgra7902.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length767
Homology
BLAST of Ggra7902.t1 vs. uniprot
Match: A0A067CBA7 (2OG-FeII_Oxy_3 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CBA7_SAPPC)

HSP 1 Score: 70.9 bits (172), Expect = 1.380e-9
Identity = 51/173 (29.48%), Postives = 76/173 (43.93%), Query Frame = 0
Query:   15 LVSIFASAFIHGV------VPNGIPPPILRVDGIGAITLPVPSTQAFSLAQASAVVKQGPQLERDHSGLYSGRI-----IDKSRFRTSPNWTSAIEKLADETVAELGMSGRTMKFVTRELVILEPSAMFTSEMDADNFRGSFSILIVSLPSPQGRAMLTSNHAGKEHQYDLGG 176
            L SI  S   HG       +PNG PP +LRVDG+G I  P+   QA +L  A  +   G    R H  +    +         +   SP WT+A+ +LA +   +LG+S      + + L++ E    F    D +   G F  L+V LP+      L   H G+  ++ L G
Sbjct:   83 LRSILDSVVTHGTFATGDQLPNGFPPSLLRVDGVGRIAFPLCPEQAATLKAACTISPFG----RGHDTVIDTNVRRSVEATADKVHLSPAWTAAVNQLAIDACEKLGLSFPVDAHLYK-LLLYEEGDFFLEHQDTEKEPGMFGTLLVQLPAEHTGGHLDVLHRGQTKRFGLDG 250          
BLAST of Ggra7902.t1 vs. uniprot
Match: A0A831RE15 (2OG-Fe(II) oxygenase n=1 Tax=Methylothermaceae bacterium TaxID=2268196 RepID=A0A831RE15_9GAMM)

HSP 1 Score: 60.5 bits (145), Expect = 3.430e-6
Identity = 53/176 (30.11%), Postives = 72/176 (40.91%), Query Frame = 0
Query:    1 MAQQLRESIQKSLRLVSIFASAFIHGVVPNGIPPPILRVDGIGAITLPVPSTQAFSLAQASAVVKQGPQLERDHSGLYSGRI-IDKSRFRT-SPNWTSAIEKLADETVAELGMSGRTMKFVTRELVILEPSAMFTSEMDADNFRGSFSILIVSLPSPQGRAMLTSNHAGKEHQYDL 174
            MA QL  ++ K LR V         G     +  P+L V+G+G I LP+  TQA  L  A+     G   E  H   Y     ID  R R     W   +E +       LG+ G  +     +L+I EP   F    D +   G F+ L+V LPS      L   H G++   DL
Sbjct:   46 MAIQLCTALHKILRTVKRPGDFCTSG--RMAVHLPVLEVEGVGRIALPLLETQARQLIDAAEAAPYGRGSETLHDPDYRRTWQIDAGRIRLRGVAWEKDLEAIVRRAAEGLGVEG-PVAAQPYKLLIYEPGCFFLPHRDTEKAAGMFATLVVLLPSDFSGGELVVEHQGRQVTLDL 218          
The following BLAST results are available for this feature:
BLAST of Ggra7902.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A067CBA71.380e-929.482OG-FeII_Oxy_3 domain-containing protein n=1 Tax=S... [more]
A0A831RE153.430e-630.112OG-Fe(II) oxygenase n=1 Tax=Methylothermaceae bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 429..449
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 416..766
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..395
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 396..415
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:340984..343481 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7902.t1Ggra7902.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 340984..343481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7902.t1 ID=Ggra7902.t1|Name=Ggra7902.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=767bp
MAQQLRESIQKSLRLVSIFASAFIHGVVPNGIPPPILRVDGIGAITLPVP
STQAFSLAQASAVVKQGPQLERDHSGLYSGRIIDKSRFRTSPNWTSAIEK
LADETVAELGMSGRTMKFVTRELVILEPSAMFTSEMDADNFRGSFSILIV
SLPSPQGRAMLTSNHAGKEHQYDLGGYSTNGRYLVALGHDSLTQLLEVFH
LWERIPDQQRPSKVVLALNTRCKKENLSFANLEYDDAVFVRHLRNCNKFS
ILLVLLRANLSEKGRKKKMGTEEERFVTWNNCDEENESGGAVDLRRKNTC
EEELSVIKVVDDSDNVVNHFPVKVSHSKDVILNRSSRGEAQVRGTPQDEA
HTTINSRLSSALIFWPKNADFRMLCESNFLSALQFLRSAALVPGKFAIEA
LLLAIGFIAVTSGNMRRYLIHMLEFSCHLKNLECALEVLKQMSTQSKNDT
TSSPALIKIIESTSIENFSYGSEFLARTQRCGLNEEVLIAVTKTLMGLVQ
TEGSDRSLVSTAKFVFSFKLFHEQQRAFLENVKKLPIGSIFEAIQRIDAA
LEETGVSDRAMEGLTSLTKVYVPRAIDEYCHARKICGTRRLYPYLFFEED
SDEGEHLVKVLSIFIRWRHENEYPLSFLLEKSVSARSLRLLKVLAKCEQL
VSAVDDTNVRKLLEALMKNLDYPRPMQSNWQTKAYISGHEVVTKSLHGEL
LELTYRGFVGVREARDFVEGRFYGIYNEIEQHSVSAKVVGRGSKAAVILQ
KTNYYYLHQLKLYEED*
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