Ggra5121.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra5121.t1
Unique NameGgra5121.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length377
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:524117..525247 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5121Ggra5121Gracilaria gracilis GNS1m malegenetig00000069_pilon 524117..525247 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5121.t1.start1Ggra5121.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000069_pilon 524117..524119 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5121.t1.CDS1Ggra5121.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000069_pilon 524117..525247 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5121.t1.exon1Ggra5121.t1.exon1Gracilaria gracilis GNS1m maleexontig00000069_pilon 524117..525247 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5121.t1.stop1Ggra5121.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000069_pilon 525245..525247 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5121.t1Ggra5121.t1Gracilaria gracilis GNS1m malepolypeptidetig00000069_pilon 524117..525247 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra5121.t1 ID=Ggra5121.t1|Name=Ggra5121.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=377bp
MVRYLKNWTEKIDDQNALDRFVAVELLLARLHFPISVCFALGVLAQTGLV
PYIAPHEWRLVLVASFFLTLANGRDLNHCIRHFYQIQSSEDDFSQSLLDL
DAKDEVSSAWGQMQMLAAFSLTLGSVSLLNSSIIALIRDNAVSQVVSRRQ
YAASFALFLIGSGANGVLSSGRTQSLESFRILISFQNLLASATLCTASVL
LLPDIGVEESMSPFQTSLLTILSSVGCIMLVMSSIVNYFHTLGYCTLHYE
GYNLLLERRKSQIGKSKRMAAWETVKGLLWARKGTWWKRRKSNRKRARYA
ISNTSLEHSIDEENQADDEGGSESSNYSSSMTSRSTSSESFSTIYDEEAG
SRTSFASGDSQDEEPNETRERKRGDP*
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spliced messenger RNA

>Ggra5121.t1 ID=Ggra5121.t1|Name=Ggra5121.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1131bp|location=Sequence derived from alignment at tig00000069_pilon:524117..525247+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAAGATATCTGAAGAACTGGACCGAGAAGATCGACGACCAAAACGC
ACTGGACCGCTTTGTTGCTGTTGAGCTTTTGTTGGCGCGATTGCACTTCC
CCATTTCCGTCTGCTTCGCGCTCGGCGTCCTCGCTCAAACGGGTCTTGTC
CCGTACATAGCACCGCACGAATGGCGGCTGGTCCTCGTTGCAAGCTTTTT
CCTCACATTAGCGAATGGGCGTGACCTTAACCATTGCATTCGGCACTTTT
ATCAGATCCAATCGAGTGAGGACGATTTTTCGCAGTCACTACTAGACCTT
GATGCTAAGGACGAGGTCTCCAGTGCCTGGGGTCAGATGCAAATGCTCGC
GGCATTTTCTTTAACTCTTGGGAGCGTTTCTCTGCTAAATTCAAGCATTA
TCGCTCTCATTCGGGACAATGCCGTATCTCAGGTTGTTAGTCGGCGGCAA
TATGCTGCTTCCTTCGCACTGTTCTTGATAGGGTCCGGGGCTAACGGAGT
GTTGTCGTCAGGGAGAACACAAAGTTTAGAGAGTTTTCGAATTCTTATCA
GCTTTCAGAACTTGCTGGCGTCTGCAACTCTTTGCACTGCAAGCGTACTA
CTGCTACCAGATATCGGAGTGGAAGAGAGTATGAGCCCTTTCCAGACGTC
TCTATTGACCATTTTGTCTTCTGTTGGATGCATAATGCTCGTTATGTCTT
CCATCGTCAACTATTTTCACACTCTTGGATATTGCACACTACACTACGAA
GGATACAACCTTCTACTCGAACGACGAAAATCGCAGATTGGAAAGAGCAA
AAGGATGGCGGCCTGGGAAACGGTCAAAGGCTTGTTGTGGGCAAGAAAAG
GGACATGGTGGAAACGACGAAAGTCAAATCGAAAGAGGGCGCGATATGCT
ATTAGCAACACAAGTCTAGAGCACTCCATCGATGAAGAAAATCAAGCAGA
TGACGAGGGCGGCTCAGAATCCAGCAATTATTCCTCGTCTATGACATCTA
GATCTACTTCAAGCGAGTCTTTCTCAACTATATATGACGAGGAGGCTGGA
TCCCGCACTTCATTTGCTTCTGGGGACTCTCAGGATGAGGAACCTAATGA
AACTAGAGAAAGAAAGCGAGGGGATCCGTAG
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protein sequence of Ggra5121.t1

>Ggra5121.t1 ID=Ggra5121.t1|Name=Ggra5121.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=377bp
MVRYLKNWTEKIDDQNALDRFVAVELLLARLHFPISVCFALGVLAQTGLV
PYIAPHEWRLVLVASFFLTLANGRDLNHCIRHFYQIQSSEDDFSQSLLDL
DAKDEVSSAWGQMQMLAAFSLTLGSVSLLNSSIIALIRDNAVSQVVSRRQ
YAASFALFLIGSGANGVLSSGRTQSLESFRILISFQNLLASATLCTASVL
LLPDIGVEESMSPFQTSLLTILSSVGCIMLVMSSIVNYFHTLGYCTLHYE
GYNLLLERRKSQIGKSKRMAAWETVKGLLWARKGTWWKRRKSNRKRARYA
ISNTSLEHSIDEENQADDEGGSESSNYSSSMTSRSTSSESFSTIYDEEAG
SRTSFASGDSQDEEPNETRERKRGDP*
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mRNA from alignment at tig00000069_pilon:524117..525247+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra5121.t1 ID=Ggra5121.t1|Name=Ggra5121.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1131bp|location=Sequence derived from alignment at tig00000069_pilon:524117..525247+ (Gracilaria gracilis GNS1m male)
ATGGTAAGATATCTGAAGAACTGGACCGAGAAGATCGACGACCAAAACGC
ACTGGACCGCTTTGTTGCTGTTGAGCTTTTGTTGGCGCGATTGCACTTCC
CCATTTCCGTCTGCTTCGCGCTCGGCGTCCTCGCTCAAACGGGTCTTGTC
CCGTACATAGCACCGCACGAATGGCGGCTGGTCCTCGTTGCAAGCTTTTT
CCTCACATTAGCGAATGGGCGTGACCTTAACCATTGCATTCGGCACTTTT
ATCAGATCCAATCGAGTGAGGACGATTTTTCGCAGTCACTACTAGACCTT
GATGCTAAGGACGAGGTCTCCAGTGCCTGGGGTCAGATGCAAATGCTCGC
GGCATTTTCTTTAACTCTTGGGAGCGTTTCTCTGCTAAATTCAAGCATTA
TCGCTCTCATTCGGGACAATGCCGTATCTCAGGTTGTTAGTCGGCGGCAA
TATGCTGCTTCCTTCGCACTGTTCTTGATAGGGTCCGGGGCTAACGGAGT
GTTGTCGTCAGGGAGAACACAAAGTTTAGAGAGTTTTCGAATTCTTATCA
GCTTTCAGAACTTGCTGGCGTCTGCAACTCTTTGCACTGCAAGCGTACTA
CTGCTACCAGATATCGGAGTGGAAGAGAGTATGAGCCCTTTCCAGACGTC
TCTATTGACCATTTTGTCTTCTGTTGGATGCATAATGCTCGTTATGTCTT
CCATCGTCAACTATTTTCACACTCTTGGATATTGCACACTACACTACGAA
GGATACAACCTTCTACTCGAACGACGAAAATCGCAGATTGGAAAGAGCAA
AAGGATGGCGGCCTGGGAAACGGTCAAAGGCTTGTTGTGGGCAAGAAAAG
GGACATGGTGGAAACGACGAAAGTCAAATCGAAAGAGGGCGCGATATGCT
ATTAGCAACACAAGTCTAGAGCACTCCATCGATGAAGAAAATCAAGCAGA
TGACGAGGGCGGCTCAGAATCCAGCAATTATTCCTCGTCTATGACATCTA
GATCTACTTCAAGCGAGTCTTTCTCAACTATATATGACGAGGAGGCTGGA
TCCCGCACTTCATTTGCTTCTGGGGACTCTCAGGATGAGGAACCTAATGA
AACTAGAGAAAGAAAGCGAGGGGATCCGTAG
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Coding sequence (CDS) from alignment at tig00000069_pilon:524117..525247+

>Ggra5121.t1 ID=Ggra5121.t1|Name=Ggra5121.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1131bp|location=Sequence derived from alignment at tig00000069_pilon:524117..525247+ (Gracilaria gracilis GNS1m male)
ATGGTAAGATATCTGAAGAACTGGACCGAGAAGATCGACGACCAAAACGC
ACTGGACCGCTTTGTTGCTGTTGAGCTTTTGTTGGCGCGATTGCACTTCC
CCATTTCCGTCTGCTTCGCGCTCGGCGTCCTCGCTCAAACGGGTCTTGTC
CCGTACATAGCACCGCACGAATGGCGGCTGGTCCTCGTTGCAAGCTTTTT
CCTCACATTAGCGAATGGGCGTGACCTTAACCATTGCATTCGGCACTTTT
ATCAGATCCAATCGAGTGAGGACGATTTTTCGCAGTCACTACTAGACCTT
GATGCTAAGGACGAGGTCTCCAGTGCCTGGGGTCAGATGCAAATGCTCGC
GGCATTTTCTTTAACTCTTGGGAGCGTTTCTCTGCTAAATTCAAGCATTA
TCGCTCTCATTCGGGACAATGCCGTATCTCAGGTTGTTAGTCGGCGGCAA
TATGCTGCTTCCTTCGCACTGTTCTTGATAGGGTCCGGGGCTAACGGAGT
GTTGTCGTCAGGGAGAACACAAAGTTTAGAGAGTTTTCGAATTCTTATCA
GCTTTCAGAACTTGCTGGCGTCTGCAACTCTTTGCACTGCAAGCGTACTA
CTGCTACCAGATATCGGAGTGGAAGAGAGTATGAGCCCTTTCCAGACGTC
TCTATTGACCATTTTGTCTTCTGTTGGATGCATAATGCTCGTTATGTCTT
CCATCGTCAACTATTTTCACACTCTTGGATATTGCACACTACACTACGAA
GGATACAACCTTCTACTCGAACGACGAAAATCGCAGATTGGAAAGAGCAA
AAGGATGGCGGCCTGGGAAACGGTCAAAGGCTTGTTGTGGGCAAGAAAAG
GGACATGGTGGAAACGACGAAAGTCAAATCGAAAGAGGGCGCGATATGCT
ATTAGCAACACAAGTCTAGAGCACTCCATCGATGAAGAAAATCAAGCAGA
TGACGAGGGCGGCTCAGAATCCAGCAATTATTCCTCGTCTATGACATCTA
GATCTACTTCAAGCGAGTCTTTCTCAACTATATATGACGAGGAGGCTGGA
TCCCGCACTTCATTTGCTTCTGGGGACTCTCAGGATGAGGAACCTAATGA
AACTAGAGAAAGAAAGCGAGGGGATCCGTAG
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