Ggra5134.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5134.t1
Unique NameGgra5134.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length189
Homology
BLAST of Ggra5134.t1 vs. uniprot
Match: A0A2V3IDW9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDW9_9FLOR)

HSP 1 Score: 298 bits (762), Expect = 6.120e-101
Identity = 141/180 (78.33%), Postives = 157/180 (87.22%), Query Frame = 0
Query:    9 APVPGENVLSTWPNAKLFLAAGDGSAWASLAAFDGVGTLRLTTCRLLFSLTPPSTARAHLSIPLAWLRPDRLHIRRPFFDNQHIAGLLTPCELHTPDPIFSACKSMHFRLQLLDVHVNDELFHALRELIADPQRLALHTRVLRAQVDKKLVPSGKCYAFVDPNDRRYLHLATQMMHPEFP 188
            +PVPGE VLSTWPN K FL+  + S WASLAAF GVGTLRLTTCRLLF++TPPS++RAHLSIPLAWLRP++LHIRRPFFDN+HI+GLLTPCELHTPDPIF   KSM FRL+LLDV V D LF ALR+LIADPQRLALHTR LRAQVD+KLVP+G  +AFVDP D RYLHLATQMMHP  P
Sbjct:   10 SPVPGETVLSTWPNTKFFLSTTETSTWASLAAFHGVGTLRLTTCRLLFTVTPPSSSRAHLSIPLAWLRPEKLHIRRPFFDNKHISGLLTPCELHTPDPIFRFSKSMEFRLELLDVQVYDTLFFALRDLIADPQRLALHTRALRAQVDEKLVPTGNHFAFVDPTDPRYLHLATQMMHPTLP 189          
BLAST of Ggra5134.t1 vs. uniprot
Match: R7QAG4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAG4_CHOCR)

HSP 1 Score: 189 bits (481), Expect = 1.010e-56
Identity = 100/184 (54.35%), Postives = 128/184 (69.57%), Query Frame = 0
Query:   12 PGENVLSTWPNAKLFLAAGD--GSAWASLAAFDGVGTLRLTTCRLLFSLTP-PSTARAH-LSIPLAWLRPDRLHIRRPFFDNQHIAGLLTPCEL-HT---PDPIFSAC-KSMHFRLQLLDVHVNDELFHALRELIADPQRLALHTRVLRAQVDKKLVPSGKCYAFVDPNDRRYLHLATQMMHPE 186
            PGE  LS+W + K F+ A +  GS+WA LAAF G G   L+TCRL+F L P PS A  H LSIPL WLR D LHIRRPFFD++H+AG+L P ++ H+   P P+F+   K M FR+++LD  +NDEL  AL +L+ADP R+A  TRVLR  VDK L+P+   YAF+DP +  +LHL TQM HPE
Sbjct:  113 PGEKFLSSWHDVKFFVGASEPHGSSWAPLAAFYGFGHAHLSTCRLVFILEPRPSVAAPHHLSIPLVWLRKDHLHIRRPFFDSKHLAGVLVPADVTHSALGPSPVFATPGKPMEFRIEMLDSSMNDELAGALHDLLADPDRVAKDTRVLRKAVDKALIPTDVHYAFIDPTNPSFLHLGTQMTHPE 296          
The following BLAST results are available for this feature:
BLAST of Ggra5134.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IDW96.120e-10178.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QAG41.010e-5654.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:558327..558893 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5134.t1Ggra5134.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 558327..558893 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5134.t1 ID=Ggra5134.t1|Name=Ggra5134.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=189bp
MPPAHPTTAPVPGENVLSTWPNAKLFLAAGDGSAWASLAAFDGVGTLRLT
TCRLLFSLTPPSTARAHLSIPLAWLRPDRLHIRRPFFDNQHIAGLLTPCE
LHTPDPIFSACKSMHFRLQLLDVHVNDELFHALRELIADPQRLALHTRVL
RAQVDKKLVPSGKCYAFVDPNDRRYLHLATQMMHPEFP*
back to top