Ggra5919.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5919.t1
Unique NameGgra5919.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1984
Homology
BLAST of Ggra5919.t1 vs. uniprot
Match: A0A2V3IT15 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT15_9FLOR)

HSP 1 Score: 886 bits (2289), Expect = 1.620e-281
Identity = 531/904 (58.74%), Postives = 655/904 (72.46%), Query Frame = 0
Query:    1 MSTDQPSVP-VAHATTNKLQLENQSLKRRLVQYAATLEKLTTHAKREIDQSTRARDEALSRAADASALRQKLSTMNASLTNAQSTRDTATASLHRAEARVEQLQATLASLQRRLDDARYDDTQVASMREELLSLRKEMPNLRRLREQDASRALTLNDQLEVEKQKSATYDSMVLRLQQMQTENSQLVTDRDAVQLSLSNLRRSESSATRERDDVIVKLRESQDMNDMLRQQLHQLQDRVRLLEQRIKDAEATEIRRDNEVADAKRQSDNAVSALRTELDSALKDLGDRNTMYDELKEKHDRSIDAESALAERDSMQSNIRQLQIELDQSTEMLTRAAIDALADKGKIRKLEDSLSKLRAEVDGERKEKGMFETRTVNLTQQMAALEGELDQVRTSKRELADECHKYQLQIHERDSVVASKNRALEELDTDRNDRTFQIDRLKLELSNSKNALAKKESDLMKLTTEYEDLCSVIKSTNRDLDDKHSEVAGARREVAAANDQVSKLTQERDHLKVTVAELQVASRQVEELSALVSSKDDEIGSMKRWCTSLKAEAGESVREKKRLSDMLSDVSGDLKRANQELALLRNMRREQEILAHRISQIGETSSRELNDMRKSQSEQAEVLAKSTVEAYQGRLVELQKSAHHEIADTVSTQLRDDIMPHLMRAVDAKARNLVHALAKHVESFTLDDATPD--AGAKDHARPMPSTKAEVAATASVDRSTYATSASASRSVSLSAPPSVPPPGTQSAAPLSATESPSISLANASHG----DYTGMEST-AEPSAITSDRSVEAIRVYGGPSSVPTATSSAQGVPSETVEFQSEGVDMTDDIDPVAIHNRLTETYKQLLG-----------GRTDLDLD-EFQTSPEVIEQNVASRQVTSV-----SAEPIAQE 879
            MSTDQPS   VA    +KLQLENQSLKRRLVQYAATLEKLTTHAKREIDQSTRARDEALSRAADASALRQ++                                        RLDDARYDD+ VASM++EL       P+LRR+REQ+A+RA  L+DQLE EK KSA+YDS++L+LQ MQT NSQL+TDRDA QL++SN+RRSESS TRER+D+  KLR+S DMNDMLRQQLHQ QDR+RLLEQR+KDA+A EI+  N+ ADAK+Q+D+A+ ALR ELD+ALK LG+RNTMY+EL++KH RS++AE+A++ERD+M++N+RQLQ+ELDQSTEMLTRAAIDALADK KIRKLED+L K+R++VDGERK++G  E +   L QQ+A+LE +LDQ+R SKR LADECHK+QLQIHERDS+VASKNRAL+ELDTDRNDR FQ+DRLKLELSN+KN L KKE+DL+++TTEYE++C++I+STN++L+ KH+EV   R+++AAA D ++KL  ERD LKVT +ELQ   RQ EELS LV++KD+E+ SMKRWCT +KAEAGESVREKKRL+DML+DVSGDLKRANQEL LLRNMR+EQE LA RISQ                              YQGRL E+QKSA HEIA+TVS+QLRDDIMPHLMRAVDAKAR+LVH+LAKHVESFTLDDA     + AKD++ P P   +  A                + + S S PPS P   ++S    SATES S+SLANASHG    +YT  E+T AEPSA+TS+RS E +R     SS+ TAT+   G+       Q    ++  DIDPVAIHNRLTE+YK+LLG           G  D++ +       E+++    +RQ+ S        EP+AQE
Sbjct:    1 MSTDQPSTQSVAPPPPSKLQLENQSLKRRLVQYAATLEKLTTHAKREIDQSTRARDEALSRAADASALRQRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDDARYDDSHVASMKDELXXXXXXXPSLRRMREQEAARATALSDQLEAEKNKSASYDSLMLKLQNMQTHNSQLLTDRDAAQLTVSNMRRSESSLTREREDLCAKLRDSDDMNDMLRQQLHQTQDRLRLLEQRVKDAQAAEIQFQNDAADAKKQNDDAIDALRQELDNALKHLGERNTMYEELQQKHARSVEAETAISERDAMRANVRQLQVELDQSTEMLTRAAIDALADKAKIRKLEDALGKMRSDVDGERKQRGSSEVKIAALNQQIASLEADLDQLRASKRSLADECHKFQLQIHERDSIVASKNRALDELDTDRNDRAFQVDRLKLELSNTKNGLVKKETDLVRITTEYEEMCAMIRSTNKELESKHAEVNSIRKDLAAATDNINKLVLERDQLKVTASELQSTRRQAEELSRLVAAKDEELSSMKRWCTGIKAEAGESVREKKRLTDMLADVSGDLKRANQELELLRNMRQEQETLAQRISQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQGRLAEMQKSARHEIAETVSSQLRDDIMPHLMRAVDAKARHLVHSLAKHVESFTLDDAAASYPSAAKDYSIPKPPLDSRAAQ---------------AETPSASLPPSAPQSTSRSLFVHSATESTSMSLANASHGGDTYEYTATEATTAEPSAVTSERSTEPLRELAD-SSIATATTGPIGI-------QPTDEELAGDIDPVAIHNRLTESYKELLGDHSLTDPTQKEGFRDINTEASMDNVSELVQVKTTTRQIISAVEVPAEQEPVAQE 881          
The following BLAST results are available for this feature:
BLAST of Ggra5919.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IT151.620e-28158.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 559..593
NoneNo IPR availableCOILSCoilCoilcoord: 346..366
NoneNo IPR availableCOILSCoilCoilcoord: 85..119
NoneNo IPR availableCOILSCoilCoilcoord: 479..520
NoneNo IPR availableCOILSCoilCoilcoord: 381..401
NoneNo IPR availableCOILSCoilCoilcoord: 217..251
NoneNo IPR availableCOILSCoilCoilcoord: 22..42
NoneNo IPR availableCOILSCoilCoilcoord: 304..331
NoneNo IPR availableCOILSCoilCoilcoord: 437..464
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availableCOILSCoilCoilcoord: 1237..1257
NoneNo IPR availableGENE3D1.10.287.1490coord: 456..651
e-value: 1.6E-5
score: 26.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 989..1004
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1806..1826
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1963..1983
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1781..1832
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 743..779
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1523..1545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1241..1273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1184..1198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1682..1699
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1713..1729
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1340..1364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 789..808
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 730..780
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1422..1437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1068..1082
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 870..1275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1083..1099
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1145..1160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 794..808
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1781..1805
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1011..1043
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1376..1400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1950..1983
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1340..1745
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 933..960
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1655..1671
NoneNo IPR availablePANTHERPTHR32083:SF0CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58coord: 483..1296
NoneNo IPR availablePANTHERPTHR32083CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATEDcoord: 483..1296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:530170..536121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5919.t1Ggra5919.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 530170..536121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5919.t1 ID=Ggra5919.t1|Name=Ggra5919.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1984bp
MSTDQPSVPVAHATTNKLQLENQSLKRRLVQYAATLEKLTTHAKREIDQS
TRARDEALSRAADASALRQKLSTMNASLTNAQSTRDTATASLHRAEARVE
QLQATLASLQRRLDDARYDDTQVASMREELLSLRKEMPNLRRLREQDASR
ALTLNDQLEVEKQKSATYDSMVLRLQQMQTENSQLVTDRDAVQLSLSNLR
RSESSATRERDDVIVKLRESQDMNDMLRQQLHQLQDRVRLLEQRIKDAEA
TEIRRDNEVADAKRQSDNAVSALRTELDSALKDLGDRNTMYDELKEKHDR
SIDAESALAERDSMQSNIRQLQIELDQSTEMLTRAAIDALADKGKIRKLE
DSLSKLRAEVDGERKEKGMFETRTVNLTQQMAALEGELDQVRTSKRELAD
ECHKYQLQIHERDSVVASKNRALEELDTDRNDRTFQIDRLKLELSNSKNA
LAKKESDLMKLTTEYEDLCSVIKSTNRDLDDKHSEVAGARREVAAANDQV
SKLTQERDHLKVTVAELQVASRQVEELSALVSSKDDEIGSMKRWCTSLKA
EAGESVREKKRLSDMLSDVSGDLKRANQELALLRNMRREQEILAHRISQI
GETSSRELNDMRKSQSEQAEVLAKSTVEAYQGRLVELQKSAHHEIADTVS
TQLRDDIMPHLMRAVDAKARNLVHALAKHVESFTLDDATPDAGAKDHARP
MPSTKAEVAATASVDRSTYATSASASRSVSLSAPPSVPPPGTQSAAPLSA
TESPSISLANASHGDYTGMESTAEPSAITSDRSVEAIRVYGGPSSVPTAT
SSAQGVPSETVEFQSEGVDMTDDIDPVAIHNRLTETYKQLLGGRTDLDLD
EFQTSPEVIEQNVASRQVTSVSAEPIAQEQSEKIAAEAPAMDELPVGTRD
IPSVAVEQLDAPQPQEEPLEIVESYVPKEGEVDESLEDGEGETEEDAPEE
QEPEATSEPADDTAEEFKDALAEVVPVAPNMDAAVEVPEEIVHEEDDETN
EPSTAEEPQELSRGFRFEQAEPIETEVETEKLTQTETEKELQQTAKVDTS
PTESAPVADVVALPEVVPEPKAEEHAEAGVAADDTNVEEDIEDDAPEPVE
EVHDVALSAEMQVQDEPREPADSEEALEGEGLIAGEREYQFVAPEPIEPE
EEDTTDAVDEVKQDQEESAADDGLPQEEEEDFEDVLHGASKEIEVAAEDA
ADETTQDQEEVAAGDDLPQEREDPDEIDPVEVVFDASQEIEAAVEDSEDE
TEQEQGEVMAGEEHEDSEEVFDDASREIEAAVGGSVDETKQEQEVVAADD
DVPHKLEDSADVVDDAPRDAEATVEDAVDETQPDREEIVADAYLPREPEE
PEEAFHDAPREIESVVENVPEQVEEITEVEAQKDEPLGEAREHLPEEVEE
EDHPLTEEGGDEPRAIVTVADAQEDDDDGEGEQEPIEEELQSDKVPQEIE
VPDVVEEDEEKVVSSAAPEPEHESAPEQPADDSVEASSGLPTDALEDAVI
DDDVVMGSEQPRGLDLSAATKAVSEDIPTTTEAEQPTTSEDVVEQSGALG
SAIEEHAVEADEMQAELQENRSGTVEDPVAHTAPLESSLPPLESSLPAEG
VLGSDQVPAVDLSSGYEEAIPAAKNVLLSTEEEVVEETSTAAQPGIPSHD
DEDVVPGGVEDEGEALEDATSDPVDVQESLPRSSLVEEETREEEKASPIQ
ETLGVDVEDEALGEDEHVPRADHDYVGETTGIRAEGTQGLQEDDDVEDIE
VVDATRDDYGADVELETEPPVMAFPTLNVVEEEDILEDDEDDDFEDDEDD
NLEDDRDVRQDGIEELDLTEGVPADLDDHSDLDEEYEDVVNGDAVYGHAV
VEELAGDVEEEDISATAEHEAQVIGGEDEAEALSTEQDIYKDAKGSAAVM
EEKDLDALSEEQRKAAGGKQLLEVSKEEEKAEFRDEFMKMAMKMEAAQAA
AATAADAEKSALPGGDVEAKVDDSVEGENILRA*
back to top