Ggra10081.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10081.t1
Unique NameGgra10081.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length177
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000066_piloncontigtig00000066_pilon:56955..57485 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10081Ggra10081Gracilaria gracilis GNS1m malegenetig00000066_pilon 56955..57485 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10081.t1.stop1Ggra10081.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000066_pilon 56955..56957 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10081.t1.CDS1Ggra10081.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000066_pilon 56955..57485 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10081.t1.exon1Ggra10081.t1.exon1Gracilaria gracilis GNS1m maleexontig00000066_pilon 56955..57485 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10081.t1.start1Ggra10081.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000066_pilon 57483..57485 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10081.t1Ggra10081.t1Gracilaria gracilis GNS1m malepolypeptidetig00000066_pilon 56955..57485 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10081.t1 ID=Ggra10081.t1|Name=Ggra10081.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=177bp
MNYISSTTKQEPKPRERSTPAAQEHHVSSTVGDQEERRKKNKLEASSDDA
TNFVSISAIGTGPRFGKREEQWYETVLKTLTEQFSKLNLAGGNALKIWDY
ESKYSGQCDEFVWRNPPPRYLGSGVNVHGNRWTTLKGGGYHYANHGTDGG
FYIRNSDGSSYHFSPRRGGRYTPARR*
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spliced messenger RNA

>Ggra10081.t1 ID=Ggra10081.t1|Name=Ggra10081.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=531bp|location=Sequence derived from alignment at tig00000066_pilon:56955..57485- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAATTATATCTCATCGACAACAAAACAGGAACCAAAGCCAAGAGAGCG
AAGCACTCCTGCTGCTCAAGAACATCATGTGTCAAGTACCGTAGGCGACC
AAGAAGAAAGAAGAAAGAAAAATAAGCTAGAGGCCTCAAGCGACGATGCT
ACGAACTTTGTATCCATCAGTGCGATTGGCACCGGTCCACGTTTTGGCAA
GCGAGAGGAACAGTGGTACGAAACGGTGCTTAAGACTTTGACAGAGCAGT
TTTCGAAGCTCAACTTGGCTGGAGGGAACGCTTTGAAGATTTGGGACTAT
GAGAGCAAGTACTCTGGACAGTGCGACGAGTTTGTGTGGAGAAACCCGCC
TCCGAGGTACTTGGGCAGCGGAGTGAATGTTCATGGAAACCGGTGGACGA
CGTTGAAGGGCGGTGGATATCACTACGCAAACCATGGTACAGATGGAGGG
TTCTACATTCGGAACAGCGATGGCTCTTCGTACCACTTCTCGCCGCGTCG
CGGCGGGCGGTACACGCCAGCCCGGCGGTGA
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protein sequence of Ggra10081.t1

>Ggra10081.t1 ID=Ggra10081.t1|Name=Ggra10081.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=177bp
MNYISSTTKQEPKPRERSTPAAQEHHVSSTVGDQEERRKKNKLEASSDDA
TNFVSISAIGTGPRFGKREEQWYETVLKTLTEQFSKLNLAGGNALKIWDY
ESKYSGQCDEFVWRNPPPRYLGSGVNVHGNRWTTLKGGGYHYANHGTDGG
FYIRNSDGSSYHFSPRRGGRYTPARR*
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mRNA from alignment at tig00000066_pilon:56955..57485-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10081.t1 ID=Ggra10081.t1|Name=Ggra10081.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=531bp|location=Sequence derived from alignment at tig00000066_pilon:56955..57485- (Gracilaria gracilis GNS1m male)
ATGAATTATATCTCATCGACAACAAAACAGGAACCAAAGCCAAGAGAGCG
AAGCACTCCTGCTGCTCAAGAACATCATGTGTCAAGTACCGTAGGCGACC
AAGAAGAAAGAAGAAAGAAAAATAAGCTAGAGGCCTCAAGCGACGATGCT
ACGAACTTTGTATCCATCAGTGCGATTGGCACCGGTCCACGTTTTGGCAA
GCGAGAGGAACAGTGGTACGAAACGGTGCTTAAGACTTTGACAGAGCAGT
TTTCGAAGCTCAACTTGGCTGGAGGGAACGCTTTGAAGATTTGGGACTAT
GAGAGCAAGTACTCTGGACAGTGCGACGAGTTTGTGTGGAGAAACCCGCC
TCCGAGGTACTTGGGCAGCGGAGTGAATGTTCATGGAAACCGGTGGACGA
CGTTGAAGGGCGGTGGATATCACTACGCAAACCATGGTACAGATGGAGGG
TTCTACATTCGGAACAGCGATGGCTCTTCGTACCACTTCTCGCCGCGTCG
CGGCGGGCGGTACACGCCAGCCCGGCGGTGA
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Coding sequence (CDS) from alignment at tig00000066_pilon:56955..57485-

>Ggra10081.t1 ID=Ggra10081.t1|Name=Ggra10081.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=531bp|location=Sequence derived from alignment at tig00000066_pilon:56955..57485- (Gracilaria gracilis GNS1m male)
ATGAATTATATCTCATCGACAACAAAACAGGAACCAAAGCCAAGAGAGCG
AAGCACTCCTGCTGCTCAAGAACATCATGTGTCAAGTACCGTAGGCGACC
AAGAAGAAAGAAGAAAGAAAAATAAGCTAGAGGCCTCAAGCGACGATGCT
ACGAACTTTGTATCCATCAGTGCGATTGGCACCGGTCCACGTTTTGGCAA
GCGAGAGGAACAGTGGTACGAAACGGTGCTTAAGACTTTGACAGAGCAGT
TTTCGAAGCTCAACTTGGCTGGAGGGAACGCTTTGAAGATTTGGGACTAT
GAGAGCAAGTACTCTGGACAGTGCGACGAGTTTGTGTGGAGAAACCCGCC
TCCGAGGTACTTGGGCAGCGGAGTGAATGTTCATGGAAACCGGTGGACGA
CGTTGAAGGGCGGTGGATATCACTACGCAAACCATGGTACAGATGGAGGG
TTCTACATTCGGAACAGCGATGGCTCTTCGTACCACTTCTCGCCGCGTCG
CGGCGGGCGGTACACGCCAGCCCGGCGGTGA
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