Ggra4720.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4720.t1
Unique NameGgra4720.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length427
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000065_piloncontigtig00000065_pilon:66712..67992 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4720Ggra4720Gracilaria gracilis GNS1m malegenetig00000065_pilon 66712..67992 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4720.t1.stop1Ggra4720.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000065_pilon 66712..66714 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4720.t1.CDS1Ggra4720.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000065_pilon 66712..67992 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4720.t1.exon1Ggra4720.t1.exon1Gracilaria gracilis GNS1m maleexontig00000065_pilon 66712..67992 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4720.t1.start1Ggra4720.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000065_pilon 67990..67992 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4720.t1Ggra4720.t1Gracilaria gracilis GNS1m malepolypeptidetig00000065_pilon 66712..67992 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4720.t1 ID=Ggra4720.t1|Name=Ggra4720.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=427bp
MQQHPSPHSSLPPAFSAPPPYADSHHSSTTNSFAPSHSAHAHAALVSVPA
SKHVPSHLPAASAPPPPSAAQTLSSPPSLPPHSHSHSHSHSHSHSHSHSH
HSQQAQQPHAGALPPPRADEAQHLKAPPPPPPPPPPPPHAFGSRSYMPSA
LPQMSKLHHSSLQLMSAAQAHRYPPAYPRKSEPMALPLHGDGGVHSFQTA
HDGGDDARFAFGRHSLFDELGTHDEAAAAAAAAAAASAHAQLHVAAAGGS
TGDSNDGAAAALTAVEPLHAPLAISSVPAMPNLALPNLGAHSAAGGASPM
ATVVMAGGMGNAAIVGGASEIEEALSVERKCAPRRMRAMSRSRAQQMTEM
QRKQRHNEHTRASRSRIDRGLERLKSVIKKVRPHQKVSKKADVLQEAVKL
LKEGFRIPPTDSDDERDDAPGSTLSV*
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spliced messenger RNA

>Ggra4720.t1 ID=Ggra4720.t1|Name=Ggra4720.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1281bp|location=Sequence derived from alignment at tig00000065_pilon:66712..67992- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCAACACCCCTCCCCTCACTCTTCGCTGCCGCCCGCCTTCTCCGC
GCCGCCGCCGTACGCCGATTCGCACCACTCGTCCACCACCAACTCGTTCG
CGCCGTCGCACTCGGCGCACGCGCACGCCGCGCTCGTGTCCGTGCCAGCC
TCAAAGCACGTGCCGTCGCATCTGCCCGCCGCGTCCGCGCCACCGCCGCC
GTCTGCCGCGCAGACGCTCAGCTCGCCGCCGTCGCTGCCGCCGCACTCGC
ACTCGCACTCGCACTCGCACTCGCACTCGCACTCACACTCACACTCGCAC
CACTCGCAACAAGCGCAGCAGCCGCACGCGGGCGCGCTACCGCCGCCGCG
CGCCGACGAGGCGCAGCACCTCAAGGCGCCACCGCCGCCGCCGCCACCAC
CACCGCCGCCACCGCACGCGTTTGGCAGCCGGTCGTACATGCCGTCGGCG
CTGCCGCAAATGTCCAAGCTGCATCACAGCTCGCTGCAGCTGATGAGCGC
GGCGCAAGCGCACCGGTACCCGCCGGCGTACCCGCGCAAGTCGGAGCCCA
TGGCGCTGCCGCTGCACGGCGACGGCGGGGTGCACTCGTTCCAAACGGCG
CACGACGGCGGCGACGACGCGCGCTTCGCGTTTGGGCGGCACAGCTTGTT
CGACGAGCTGGGCACGCACGACGAGGCGGCGGCGGCGGCGGCAGCAGCAG
CGGCGGCCAGCGCTCACGCGCAGCTGCACGTGGCGGCGGCGGGCGGCAGC
ACGGGCGACTCCAACGACGGCGCGGCGGCGGCGCTCACGGCGGTGGAACC
GCTGCACGCGCCGCTGGCGATCTCGTCGGTGCCAGCGATGCCCAACCTGG
CGCTGCCCAACCTGGGGGCGCACAGCGCGGCGGGCGGCGCGTCGCCCATG
GCGACGGTGGTGATGGCGGGGGGGATGGGCAACGCGGCGATAGTCGGGGG
GGCGTCGGAGATCGAGGAGGCGCTGTCAGTGGAGCGCAAGTGCGCGCCGC
GACGGATGCGCGCCATGTCGCGGTCGCGCGCGCAGCAGATGACGGAGATG
CAGCGCAAGCAGCGGCACAATGAGCACACGCGCGCGAGCCGGTCGCGCAT
TGACCGCGGGCTGGAGCGGCTCAAGTCTGTGATCAAGAAGGTGCGGCCGC
ACCAGAAGGTGAGCAAGAAGGCGGACGTGCTGCAGGAGGCGGTGAAGCTG
CTCAAGGAGGGCTTCAGAATTCCGCCCACCGACTCGGACGACGAGCGCGA
CGACGCGCCGGGCAGTACGCTCAGCGTGTGA
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protein sequence of Ggra4720.t1

>Ggra4720.t1 ID=Ggra4720.t1|Name=Ggra4720.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=427bp
MQQHPSPHSSLPPAFSAPPPYADSHHSSTTNSFAPSHSAHAHAALVSVPA
SKHVPSHLPAASAPPPPSAAQTLSSPPSLPPHSHSHSHSHSHSHSHSHSH
HSQQAQQPHAGALPPPRADEAQHLKAPPPPPPPPPPPPHAFGSRSYMPSA
LPQMSKLHHSSLQLMSAAQAHRYPPAYPRKSEPMALPLHGDGGVHSFQTA
HDGGDDARFAFGRHSLFDELGTHDEAAAAAAAAAAASAHAQLHVAAAGGS
TGDSNDGAAAALTAVEPLHAPLAISSVPAMPNLALPNLGAHSAAGGASPM
ATVVMAGGMGNAAIVGGASEIEEALSVERKCAPRRMRAMSRSRAQQMTEM
QRKQRHNEHTRASRSRIDRGLERLKSVIKKVRPHQKVSKKADVLQEAVKL
LKEGFRIPPTDSDDERDDAPGSTLSV*
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mRNA from alignment at tig00000065_pilon:66712..67992-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4720.t1 ID=Ggra4720.t1|Name=Ggra4720.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1281bp|location=Sequence derived from alignment at tig00000065_pilon:66712..67992- (Gracilaria gracilis GNS1m male)
ATGCAGCAACACCCCTCCCCTCACTCTTCGCTGCCGCCCGCCTTCTCCGC
GCCGCCGCCGTACGCCGATTCGCACCACTCGTCCACCACCAACTCGTTCG
CGCCGTCGCACTCGGCGCACGCGCACGCCGCGCTCGTGTCCGTGCCAGCC
TCAAAGCACGTGCCGTCGCATCTGCCCGCCGCGTCCGCGCCACCGCCGCC
GTCTGCCGCGCAGACGCTCAGCTCGCCGCCGTCGCTGCCGCCGCACTCGC
ACTCGCACTCGCACTCGCACTCGCACTCGCACTCACACTCACACTCGCAC
CACTCGCAACAAGCGCAGCAGCCGCACGCGGGCGCGCTACCGCCGCCGCG
CGCCGACGAGGCGCAGCACCTCAAGGCGCCACCGCCGCCGCCGCCACCAC
CACCGCCGCCACCGCACGCGTTTGGCAGCCGGTCGTACATGCCGTCGGCG
CTGCCGCAAATGTCCAAGCTGCATCACAGCTCGCTGCAGCTGATGAGCGC
GGCGCAAGCGCACCGGTACCCGCCGGCGTACCCGCGCAAGTCGGAGCCCA
TGGCGCTGCCGCTGCACGGCGACGGCGGGGTGCACTCGTTCCAAACGGCG
CACGACGGCGGCGACGACGCGCGCTTCGCGTTTGGGCGGCACAGCTTGTT
CGACGAGCTGGGCACGCACGACGAGGCGGCGGCGGCGGCGGCAGCAGCAG
CGGCGGCCAGCGCTCACGCGCAGCTGCACGTGGCGGCGGCGGGCGGCAGC
ACGGGCGACTCCAACGACGGCGCGGCGGCGGCGCTCACGGCGGTGGAACC
GCTGCACGCGCCGCTGGCGATCTCGTCGGTGCCAGCGATGCCCAACCTGG
CGCTGCCCAACCTGGGGGCGCACAGCGCGGCGGGCGGCGCGTCGCCCATG
GCGACGGTGGTGATGGCGGGGGGGATGGGCAACGCGGCGATAGTCGGGGG
GGCGTCGGAGATCGAGGAGGCGCTGTCAGTGGAGCGCAAGTGCGCGCCGC
GACGGATGCGCGCCATGTCGCGGTCGCGCGCGCAGCAGATGACGGAGATG
CAGCGCAAGCAGCGGCACAATGAGCACACGCGCGCGAGCCGGTCGCGCAT
TGACCGCGGGCTGGAGCGGCTCAAGTCTGTGATCAAGAAGGTGCGGCCGC
ACCAGAAGGTGAGCAAGAAGGCGGACGTGCTGCAGGAGGCGGTGAAGCTG
CTCAAGGAGGGCTTCAGAATTCCGCCCACCGACTCGGACGACGAGCGCGA
CGACGCGCCGGGCAGTACGCTCAGCGTGTGA
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Coding sequence (CDS) from alignment at tig00000065_pilon:66712..67992-

>Ggra4720.t1 ID=Ggra4720.t1|Name=Ggra4720.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1281bp|location=Sequence derived from alignment at tig00000065_pilon:66712..67992- (Gracilaria gracilis GNS1m male)
ATGCAGCAACACCCCTCCCCTCACTCTTCGCTGCCGCCCGCCTTCTCCGC
GCCGCCGCCGTACGCCGATTCGCACCACTCGTCCACCACCAACTCGTTCG
CGCCGTCGCACTCGGCGCACGCGCACGCCGCGCTCGTGTCCGTGCCAGCC
TCAAAGCACGTGCCGTCGCATCTGCCCGCCGCGTCCGCGCCACCGCCGCC
GTCTGCCGCGCAGACGCTCAGCTCGCCGCCGTCGCTGCCGCCGCACTCGC
ACTCGCACTCGCACTCGCACTCGCACTCGCACTCACACTCACACTCGCAC
CACTCGCAACAAGCGCAGCAGCCGCACGCGGGCGCGCTACCGCCGCCGCG
CGCCGACGAGGCGCAGCACCTCAAGGCGCCACCGCCGCCGCCGCCACCAC
CACCGCCGCCACCGCACGCGTTTGGCAGCCGGTCGTACATGCCGTCGGCG
CTGCCGCAAATGTCCAAGCTGCATCACAGCTCGCTGCAGCTGATGAGCGC
GGCGCAAGCGCACCGGTACCCGCCGGCGTACCCGCGCAAGTCGGAGCCCA
TGGCGCTGCCGCTGCACGGCGACGGCGGGGTGCACTCGTTCCAAACGGCG
CACGACGGCGGCGACGACGCGCGCTTCGCGTTTGGGCGGCACAGCTTGTT
CGACGAGCTGGGCACGCACGACGAGGCGGCGGCGGCGGCGGCAGCAGCAG
CGGCGGCCAGCGCTCACGCGCAGCTGCACGTGGCGGCGGCGGGCGGCAGC
ACGGGCGACTCCAACGACGGCGCGGCGGCGGCGCTCACGGCGGTGGAACC
GCTGCACGCGCCGCTGGCGATCTCGTCGGTGCCAGCGATGCCCAACCTGG
CGCTGCCCAACCTGGGGGCGCACAGCGCGGCGGGCGGCGCGTCGCCCATG
GCGACGGTGGTGATGGCGGGGGGGATGGGCAACGCGGCGATAGTCGGGGG
GGCGTCGGAGATCGAGGAGGCGCTGTCAGTGGAGCGCAAGTGCGCGCCGC
GACGGATGCGCGCCATGTCGCGGTCGCGCGCGCAGCAGATGACGGAGATG
CAGCGCAAGCAGCGGCACAATGAGCACACGCGCGCGAGCCGGTCGCGCAT
TGACCGCGGGCTGGAGCGGCTCAAGTCTGTGATCAAGAAGGTGCGGCCGC
ACCAGAAGGTGAGCAAGAAGGCGGACGTGCTGCAGGAGGCGGTGAAGCTG
CTCAAGGAGGGCTTCAGAATTCCGCCCACCGACTCGGACGACGAGCGCGA
CGACGCGCCGGGCAGTACGCTCAGCGTGTGA
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