Ggra4648.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4648.t1
Unique NameGgra4648.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length128
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000061_piloncontigtig00000061_pilon:317849..318232 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4648Ggra4648Gracilaria gracilis GNS1m malegenetig00000061_pilon 317849..318232 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4648.t1.start1Ggra4648.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000061_pilon 317849..317851 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4648.t1.CDS1Ggra4648.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000061_pilon 317849..318232 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4648.t1.exon1Ggra4648.t1.exon1Gracilaria gracilis GNS1m maleexontig00000061_pilon 317849..318232 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4648.t1.stop1Ggra4648.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000061_pilon 318230..318232 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4648.t1Ggra4648.t1Gracilaria gracilis GNS1m malepolypeptidetig00000061_pilon 317849..318232 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4648.t1 ID=Ggra4648.t1|Name=Ggra4648.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=128bp
MRAVTVHINIYLTKAQDDAGSEAEYQSKVLITNESTGEKSGDSKYSKVND
NRKYDPARLLHSSTHAVAWEPGQTVSAFLKMFEDDTTGDDFCFNSTYNYD
PKVPYIKNYWKGTYDAGYYTLNFMTSS*
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spliced messenger RNA

>Ggra4648.t1 ID=Ggra4648.t1|Name=Ggra4648.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=384bp|location=Sequence derived from alignment at tig00000061_pilon:317849..318232+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCGCCGTCACTGTCCATATCAACATTTATCTGACTAAAGCGCAGGA
TGATGCCGGATCTGAAGCTGAGTATCAGAGCAAGGTACTGATTACGAACG
AAAGCACGGGTGAAAAATCTGGTGATTCGAAGTACTCGAAGGTGAACGAC
AACAGGAAATATGATCCAGCTCGTCTCCTGCATTCTTCAACCCACGCAGT
TGCTTGGGAACCAGGACAGACGGTTTCAGCCTTCCTAAAGATGTTTGAGG
ATGATACAACTGGTGACGACTTCTGCTTCAACAGTACCTACAATTATGAT
CCGAAAGTCCCGTACATCAAGAATTATTGGAAGGGTACCTATGACGCAGG
ATACTACACTCTCAACTTCATGACATCCTCCTGA
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protein sequence of Ggra4648.t1

>Ggra4648.t1 ID=Ggra4648.t1|Name=Ggra4648.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=128bp
MRAVTVHINIYLTKAQDDAGSEAEYQSKVLITNESTGEKSGDSKYSKVND
NRKYDPARLLHSSTHAVAWEPGQTVSAFLKMFEDDTTGDDFCFNSTYNYD
PKVPYIKNYWKGTYDAGYYTLNFMTSS*
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mRNA from alignment at tig00000061_pilon:317849..318232+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4648.t1 ID=Ggra4648.t1|Name=Ggra4648.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=384bp|location=Sequence derived from alignment at tig00000061_pilon:317849..318232+ (Gracilaria gracilis GNS1m male)
ATGCGCGCCGTCACTGTCCATATCAACATTTATCTGACTAAAGCGCAGGA
TGATGCCGGATCTGAAGCTGAGTATCAGAGCAAGGTACTGATTACGAACG
AAAGCACGGGTGAAAAATCTGGTGATTCGAAGTACTCGAAGGTGAACGAC
AACAGGAAATATGATCCAGCTCGTCTCCTGCATTCTTCAACCCACGCAGT
TGCTTGGGAACCAGGACAGACGGTTTCAGCCTTCCTAAAGATGTTTGAGG
ATGATACAACTGGTGACGACTTCTGCTTCAACAGTACCTACAATTATGAT
CCGAAAGTCCCGTACATCAAGAATTATTGGAAGGGTACCTATGACGCAGG
ATACTACACTCTCAACTTCATGACATCCTCCTGA
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Coding sequence (CDS) from alignment at tig00000061_pilon:317849..318232+

>Ggra4648.t1 ID=Ggra4648.t1|Name=Ggra4648.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=384bp|location=Sequence derived from alignment at tig00000061_pilon:317849..318232+ (Gracilaria gracilis GNS1m male)
ATGCGCGCCGTCACTGTCCATATCAACATTTATCTGACTAAAGCGCAGGA
TGATGCCGGATCTGAAGCTGAGTATCAGAGCAAGGTACTGATTACGAACG
AAAGCACGGGTGAAAAATCTGGTGATTCGAAGTACTCGAAGGTGAACGAC
AACAGGAAATATGATCCAGCTCGTCTCCTGCATTCTTCAACCCACGCAGT
TGCTTGGGAACCAGGACAGACGGTTTCAGCCTTCCTAAAGATGTTTGAGG
ATGATACAACTGGTGACGACTTCTGCTTCAACAGTACCTACAATTATGAT
CCGAAAGTCCCGTACATCAAGAATTATTGGAAGGGTACCTATGACGCAGG
ATACTACACTCTCAACTTCATGACATCCTCCTGA
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