Ggra6762.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6762.t1
Unique Name	Ggra6762.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	296

Homology

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BLAST of Ggra6762.t1 vs. uniprot
Match: R7QBX2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBX2_CHOCR)

HSP 1 Score: 135 bits (341), Expect = 1.880e-33
Identity = 91/203 (44.83%), Postives = 107/203 (52.71%), Query Frame = 0

Query:  110 STSGKRVPTAVCSNCGRAVANNGANFRRHETACRRSRA---------------------------------------------------PV---------------VPTP--------RDQELIRVVQRLHTSISSLDVSARVCLRDALFSLSNKAANPTATPTPQQEAMNRAAEYLVLRMLFLSGAQLLMHTAPGTA-PPYP 237
            S++  RVPTA CS CG+ ++ NGANFRRHE ACRR R+                                                   PV               VPT         RD +L+ VV+RL +SI +LDVSAR+CLRDAL SLSNKA+NP   PTP+QEAMNRAAEYLVLRMLFLSG Q++ HTAPGT  P YP
Sbjct:  128 SSTRPRVPTARCSLCGKNISTNGANFRRHEDACRRQRSERVSSARPPPSAVVTNQHQNQRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVQSEPAQLQRGSQSSPVPTQQQPTGMSRRDSDLLNVVRRLESSIHTLDVSARLCLRDALVSLSNKASNPNVPPTPEQEAMNRAAEYLVLRMLFLSGQQVV-HTAPGTVGPTYP 329

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BLAST of Ggra6762.t1 vs. uniprot
Match: A0A7S1TBA4 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBA4_9RHOD)

HSP 1 Score: 86.7 bits (213), Expect = 2.400e-17
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0

Query:  152 TPRDQELIRVVQRLHTSISSLDVSARVCLRDALFSLSNKAANPTATPTPQQEAMNRAAEYLVLRMLFLSGAQLLMHTAPGTA 233
            T RD +L  +++RL   ISS+D SAR+CLRDAL SLS KA +P+   +P+ E M+RAAEYLVLR+LFL G   +M++APGTA
Sbjct:   50 TRRDGDLPSILRRLEGIISSVDDSARICLRDALLSLSLKANSPSGR-SPEHEVMSRAAEYLVLRLLFLDGPNQVMYSAPGTA 130

The following BLAST results are available for this feature:

BLAST of Ggra6762.t1 vs. uniprot

BLAST of Ggra6762.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
R7QBX2	1.880e-33	44.83	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]
A0A7S1TBA4	2.400e-17	57.32	Hypothetical protein (Fragment) n=1 Tax=Compsopogo...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 102..118 score: 29.41 coord: 225..237 score: 30.77 coord: 64..76 score: 46.15 coord: 78..99 score: 37.27 coord: 182..207 score: 28.46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..280

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000056_pilon	contig	tig00000056_pilon:450933..451820 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6762.t1	Ggra6762.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000056_pilon 450933..451820 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6762.t1 ID=Ggra6762.t1|Name=Ggra6762.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=296bp
MADAPRDSAVFGALDSLEPDDAMDPMLLNLPAPEPADWALDPLSSDLYPL
TYMEPSLPTNAPPASPPAAAPPPDPPAPSQPPPSPSQLPPASSPSRARKR
PPPPSPSPSSTSGKRVPTAVCSNCGRAVANNGANFRRHETACRRSRAPVV
PTPRDQELIRVVQRLHTSISSLDVSARVCLRDALFSLSNKAANPTATPTP
QQEAMNRAAEYLVLRMLFLSGAQLLMHTAPGTAPPYPSSSPHADDTHQQA
ERNEGDTQAVAADAVQSSAQQQQLVAPQQQAAPHTVKDDKAAGAP*