Ggra1770.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1770.t1
Unique NameGgra1770.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length248
Homology
BLAST of Ggra1770.t1 vs. uniprot
Match: A0A2V3IJ06 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ06_9FLOR)

HSP 1 Score: 215 bits (547), Expect = 5.340e-67
Identity = 108/185 (58.38%), Postives = 136/185 (73.51%), Query Frame = 0
Query:   60 ASGRNEQQNEDIVSTRTKSWVKDIVVGLGLCPFAEPAMQSDGVRYVISRAAHESMVRKVFSDEVKLLMAAEPEQISTTLIVMPEFAESDFLRFHVLTNSIEEQISEDEDLADSVLIAAFHPDFRYDDTTENDALNFEKRAPYPIINILRAELLDEYISHGKTHNIPRHNRQVLERLGSEQLKRLY 244
            A   N+  +    +  T +WV+ IV+  GLCPFAEPA+ SD VR V+S A  ES  R  F  EV+LLM+A+P++I TTLIVMP+FA +DFLRFH   + IE++ISED +L D+VLIAAFHP  RY+    + ALNFEKRAPYP INILR  LLD+YIS G+T NIP HN+QVLE+LGS++LK LY
Sbjct:   11 AESVNQSDSAGFAARGTMNWVRRIVIEKGLCPFAEPAVDSDRVRLVVSSATCESTARDKFYTEVRLLMSADPDEIVTTLIVMPDFATTDFLRFHEFASDIEDEISEDVNLVDAVLIAAFHPMHRYEGMGADSALNFEKRAPYPTINILRTPLLDDYISQGRTMNIPHHNKQVLEKLGSDKLKLLY 195          
BLAST of Ggra1770.t1 vs. uniprot
Match: R7Q3Y7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3Y7_CHOCR)

HSP 1 Score: 162 bits (409), Expect = 9.020e-42
Identity = 76/165 (46.06%), Postives = 110/165 (66.67%), Query Frame = 0
Query:   72 VSTRTKSWVKDIVVGLGLCPFAEPAMQSDGVRYVISRAAHESMVRKVFSDEVKLLMAAEPEQISTTLIVMPEFAESDFLRFHVLTNSIEEQISEDEDLADSVLIAAFHPDFRYDDTTENDA-LNFEKRAPYPIINILRAELLDEYISHGKTHNIPRHNRQVLERL 235
            V  R  +W + +V GL LCPFAE  + S+ VR  + +A+ E  V+   ++E+ LL+A  P+ +ST+L+V+P FAE DF RFH L  ++E+ I  DED+ D V++A FHP   +    + DA LNF+KRAPYP+IN LRA ++D+Y+S GKT  I   N++ LERL
Sbjct:  118 VEARVMAWARIVVCGLNLCPFAEGVLDSNTVRVQVRQASEERGVQAAVAEEISLLLATHPDDMSTSLLVLPAFAEDDFRRFHALCVALEDDIERDEDMVDEVMLACFHPRHEWAGVGDEDAALNFDKRAPYPVINFLRARVVDQYVSEGKTQRILEQNQETLERL 282          
BLAST of Ggra1770.t1 vs. uniprot
Match: A0A6H5KV68 (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV68_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 2.370e-37
Identity = 89/240 (37.08%), Postives = 130/240 (54.17%), Query Frame = 0
Query:   14 LAFCLPTNAI-RIP-HALVDNRARCKPFRTKPVFQFRYIIPTLSVNAI---------ASGRNEQQNEDIVSTRTKSWVKDIVVGLGLCPFAEPAMQSD-GVRYVISRAAHESMVRKVFSDEVKLLMAAEPEQISTTLIVMPEFAESDFLRFHVLTNSIEEQISEDEDLADSVLIAAFHPDFRYDDTTENDALNFEKRAPYPIINILRAELLDEYISHGKTHNIPRHNRQVLERLGSEQLK 241
            +AF L T+ I   P H  V N  R    RT      R   P  +V+           A+   + +++  +  + K+WV+D+VV L LCPFAE    +  GVRYV++ A     V + F  EV  LM  + E + TTL++ P F  SDF  F+     +EE I  DE L D VL+A FHP   +    ++D LN+EKR+P+P IN+LRA+++DEYI+ G+T  I  HN + L + G + +K
Sbjct:   10 VAFILATDTIGAFPLHGGVSNSGRLLALRTNMKTPLRR--PRAAVSQAYRRRACVPRANAGGDLEDDARIVRQAKAWVRDVVVKLRLCPFAEAVFNARRGVRYVVTPAETTDEVWREFLLEVDFLMDHDREDVGTTLLIAPRFL-SDFREFNDFCRWLEEAIENDEALVDQVLVACFHPRHAFHGLEQDDVLNYEKRSPHPTINLLRADMVDEYIAMGRTLGIAEHNERRLHQEGKDVVK 246          
BLAST of Ggra1770.t1 vs. uniprot
Match: A0A1M5A0F0 (Uncharacterized protein n=1 Tax=Lampropedia hyalina DSM 16112 TaxID=1122156 RepID=A0A1M5A0F0_9BURK)

HSP 1 Score: 115 bits (288), Expect = 4.140e-28
Identity = 69/189 (36.51%), Postives = 110/189 (58.20%), Query Frame = 0
Query:   52 PTLSVNAIASGRNEQQNEDIVST---RTKSWVKDIVVGLGLCPFAEPAMQSDGVRYVISRAAHESMVRKVFSDEVKLLMAAEPEQISTTLIVMPEFAESDFLRFHVLTNSIEEQISEDEDLADSVLIAAFHPDFRYDDTTENDALNFEKRAPYPIINILRAELLDEYI-SHGKTHNIPRHNRQVLERLG 236
            PT    A +SG +     D  ST   RT+ WV  +V+GL LCPFA+       VRYV+S+A HE  + +  + E+ LL  A+P++I TTL+++P+   +DFL F+      ++ + E  +L   + IA FHP +++ DT  +D  NF  RAPYP +++LR + +D  + ++ +   I   N +VLE+LG
Sbjct:    4 PTNPTTASSSGNHT--TADPASTAIARTRQWVDKVVIGLNLCPFAKSVQVKGQVRYVVSQAHHEKALLQELARELILLADADPQEIDTTLLIVPDLL-ADFLDFNDFLAECDD-VLEAMNLVGILQIADFHPRYQFADTEPDDMGNFTNRAPYPTLHLLREDSIDRAVQAYPQAEAIFERNIEVLEKLG 188          
BLAST of Ggra1770.t1 vs. uniprot
Match: A0A2I8DN60 (DUF1415 domain-containing protein n=2 Tax=unclassified Achromobacter TaxID=2626865 RepID=A0A2I8DN60_9BURK)

HSP 1 Score: 114 bits (286), Expect = 4.730e-28
Identity = 66/173 (38.15%), Postives = 96/173 (55.49%), Query Frame = 0
Query:   72 VSTRTKSWVKDIVVGLGLCPFAEPAMQSDGVRYVISRAAHESMVRKVFSDEVKLLMAAEPEQISTTLIVMPEFAESDFLRFHVLTNSIEEQISEDEDLADSVLIAAFHPDFRYDDTTENDALNFEKRAPYPIINILRAELLDEYI-SHGKTHNIPRHNRQVLERLGSEQLKRL 243
            V   T+ W+   V+GL LCPFA+     D +RY IS A     V     DE+ LL  A+PEQI TTL+++P+ A  DFL F+     I  ++ +  DL   + +A FHP F++ DT  +D  N   R+PYPI+++LR E +D  + +      I   N + ++RLG E  KRL
Sbjct:   11 VLEETQHWLNQAVIGLNLCPFAKAVQVKDQIRYAISDATDAEGVLTDLQDELALLAEADPEQIDTTLLILPD-AFDDFLDFNDF-EEISNRLLKRMDLVGELQVATFHPQFQFADTEPDDIENCTNRSPYPILHLLREESIDRAVDAFPDAAEIYEKNIETMKRLGVEGWKRL 181          
BLAST of Ggra1770.t1 vs. uniprot
Match: D7G223 (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G223_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 2.540e-27
Identity = 61/152 (40.13%), Postives = 91/152 (59.87%), Query Frame = 0
Query:   59 IASGRNEQQNEDIVSTRTKSWVKDIVVGLGLCPFAEPAMQS-DGVRYVISRAAHESMVRKVFSDEVKLLMAAEPEQISTTLIVMPEFAESDFLRFHVLTNSIEEQISEDEDLADSVLIAAFHPDFRYDDTTENDALNFEKRAPYPIINILRA 209
            +A+   + +++  +  + K+WV+D+VV L LCPFAE    +  GVRYV++ A     V + F  EV  LM  + E + TTL++ P F  SDF  F+     +EE I +DE L D VL+A FHP   +    ++D LN+EKR+P+P IN+LR 
Sbjct:   64 MANAGGDLEDDARIIRQAKAWVRDVVVKLRLCPFAEAVFNARSGVRYVVTPAETTDEVWREFLLEVDFLMDHDREDVGTTLLIAPRFL-SDFREFNDFCRWLEETIEDDEALVDQVLVACFHPRHAFHGLEQDDVLNYEKRSPHPTINLLRC 214          
BLAST of Ggra1770.t1 vs. uniprot
Match: A0A4R5W560 (DUF1415 domain-containing protein n=1 Tax=Sapientia aquatica TaxID=1549640 RepID=A0A4R5W560_9BURK)

HSP 1 Score: 113 bits (282), Expect = 2.540e-27
Identity = 64/187 (34.22%), Postives = 108/187 (57.75%), Query Frame = 0
Query:   60 ASGRNEQQNEDIVSTRTKSWVKDIVVGLGLCPFAEPAMQSDGVRYVISRAAHESMVRKVFSDEVKLLMAAEPEQISTTLIVMPEFAESDFLRFHVLTNSIEEQISEDEDLADSVL-IAAFHPDFRYDDTTENDALNFEKRAPYPIINILRAELLDEYI-SHGKTHNIPRHNRQVLERLGSEQLKRLY 244
            AS      +   V  +T++WV+  V+GL LCPFA+       +RY ++ A     +  + SDE++LL+ A+P  I TTL++ P    +DFL F+   +  +E + E +  AD VL IA+FHPD+++  +  +D  N+  R+P+P ++ILR E +D  + S+  T +I + N   L +LG +  K+L+
Sbjct:    8 ASHAESGNDRAAVLAQTQTWVEKAVIGLNLCPFAKAVQVKKQIRYTVTEATSVRELHTILSDEIQLLLEADPALIETTLLIHPHVL-NDFLDFNDFLDVADELLEELD--ADGVLQIASFHPDYQFAGSKPDDIENYTNRSPFPTLHILREESIDRAVDSYPDTDDIFQKNMDTLNKLGLDGWKKLF 191          
BLAST of Ggra1770.t1 vs. uniprot
Match: W7TR03 (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TR03_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.460e-26
Identity = 68/230 (29.57%), Postives = 117/230 (50.87%), Query Frame = 0
Query:   16 FCLPTNAIRIPHALVDNRARCKPFRTKPVFQFRYIIPTLSVNAIASGRNEQQNEDIVSTRTKSWVKDIVVGLGLCPFAEPAMQSDGVRYVISRAAHESMVRKVFSDEVKLLMAAEPEQISTTLIVMPEFAESDFLRFHVLTNSIEEQISEDEDLADSVLIAAFHPDFRYDD-TTENDALNFEKRAPYPIINILRAELLDEYISHGKTHNIPRHNRQVLERLGSEQLKRLY 244
            FC  T      H +  +     P  +K +        T S +   S      ++  V  RT++W+ ++V+ + LCPFAE  +Q + VRYV+ RA  +S +     +E + L+    +  +TT+++ P+    DF  F+     +E  + E  DL   VL+AAFHP + +    +E D ++FEKR+P+P+ N+LRAE +  Y + G T  I   N   L  +G ++++R +
Sbjct:  147 FCSTTRPRGFTHTIALSPIGLSPLPSK-IVALPASSSTSSSSFNPSSSPSGMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASL-EASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRF 374          
BLAST of Ggra1770.t1 vs. uniprot
Match: E3HQ01 (Uncharacterized protein n=88 Tax=Alcaligenaceae TaxID=506 RepID=E3HQ01_ACHXA)

HSP 1 Score: 109 bits (273), Expect = 4.000e-26
Identity = 61/173 (35.26%), Postives = 95/173 (54.91%), Query Frame = 0
Query:   72 VSTRTKSWVKDIVVGLGLCPFAEPAMQSDGVRYVISRAAHESMVRKVFSDEVKLLMAAEPEQISTTLIVMPEFAESDFLRFHVLTNSIEEQISEDEDLADSVLIAAFHPDFRYDDTTENDALNFEKRAPYPIINILRAELLDEYI-SHGKTHNIPRHNRQVLERLGSEQLKRL 243
            V   TK W+   V+GL LCPFA+     D +R+ +S A     V     DE+ LL   +PEQI TTL+++P+ A  DFL F+     + +++ +   L   + +A FHP F++ DT  +D  N+  R+PYPI+++LR + +D  + S      I   N   ++RLG E  K+L
Sbjct:   11 VVAETKHWLNQAVIGLNLCPFAKAVQVKDQIRFAVSDATDAEGVLTDLQDELALLAETDPEQIDTTLLIIPD-ALDDFLDFNDF-EELSDRLLKRMRLVGELQVATFHPQFQFADTQPDDIENYTNRSPYPILHLLREDSIDRAVESFPDAAEIYEKNIDTMKRLGLEGWKKL 181          
BLAST of Ggra1770.t1 vs. uniprot
Match: A0A220SQF6 (Uncharacterized protein n=2 Tax=Alcanivorax TaxID=59753 RepID=A0A220SQF6_9GAMM)

HSP 1 Score: 107 bits (268), Expect = 1.980e-25
Identity = 60/175 (34.29%), Postives = 97/175 (55.43%), Query Frame = 0
Query:   72 VSTRTKSWVKDIVVGLGLCPFAEPAMQSDGVRYVISRAAHESMVRKVFSDEVKLLMAAEPEQISTTLIVMPEFAESDFLRFHVLTNSIEEQISEDEDLADSVLIAAFHPDFRYDDTTENDALNFEKRAPYPIINILRAELLDEYISHGKTHN-IPRHNRQVLERLGSEQLKRLYC 245
            +  RT+ W++  V+GLGLCPFA      D V  V+S A  E+ +    S E++ L  +   +  TTL+V+P    +DFL ++   + ++  +    D  D+  +A+FHP +++  T   DA N+  RAPYPI++ILR + L   + H    + IP  N + + RLG+  LKRL+ 
Sbjct:    4 IEQRTRQWLEQAVIGLGLCPFASQPYGRDQVAIVVSDATGEAQLLAQLSAELRRLDDSAAGERETTLLVVPAML-ADFLDYNDFLDQVDALLENHGD-GDAYQVASFHPAYQFAGTAPGDAENYTNRAPYPILHILREDSLSRALEHYPDADLIPERNIEAMNRLGAAALKRLFA 176          
The following BLAST results are available for this feature:
BLAST of Ggra1770.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJ065.340e-6758.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q3Y79.020e-4246.06Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6H5KV682.370e-3737.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1M5A0F04.140e-2836.51Uncharacterized protein n=1 Tax=Lampropedia hyalin... [more]
A0A2I8DN604.730e-2838.15DUF1415 domain-containing protein n=2 Tax=unclassi... [more]
D7G2232.540e-2740.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4R5W5602.540e-2734.22DUF1415 domain-containing protein n=1 Tax=Sapienti... [more]
W7TR033.460e-2629.57Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
E3HQ014.000e-2635.26Uncharacterized protein n=88 Tax=Alcaligenaceae Ta... [more]
A0A220SQF61.980e-2534.29Uncharacterized protein n=2 Tax=Alcanivorax TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009858Protein of unknown function DUF1415PFAMPF07209DUF1415coord: 73..241
e-value: 7.6E-43
score: 146.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..247
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:584674..585417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1770.t1Ggra1770.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 584674..585417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1770.t1 ID=Ggra1770.t1|Name=Ggra1770.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=248bp
MLSGFETQGLVGALAFCLPTNAIRIPHALVDNRARCKPFRTKPVFQFRYI
IPTLSVNAIASGRNEQQNEDIVSTRTKSWVKDIVVGLGLCPFAEPAMQSD
GVRYVISRAAHESMVRKVFSDEVKLLMAAEPEQISTTLIVMPEFAESDFL
RFHVLTNSIEEQISEDEDLADSVLIAAFHPDFRYDDTTENDALNFEKRAP
YPIINILRAELLDEYISHGKTHNIPRHNRQVLERLGSEQLKRLYCWD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009858DUF1415