Ggra944.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra944.t1
Unique NameGgra944.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length248
Homology
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BLAST of Ggra944.t1 vs. uniprot
Match: A0A2V3IRM0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRM0_9FLOR)

HSP 1 Score: 100 bits (249), Expect = 4.480e-22
Identity = 63/191 (32.98%), Postives = 98/191 (51.31%), Query Frame = 0 
Query:   43 QSLLVRQDNKSREKQTTDEQRSASPSFLVVCDNGCSSCSAENGTIVECSIN--MSTPISVLRVVPQEFGFLNVVSRVDIGTDLFNVEGGPVTPFNIPPSSCPNPTNFTVPSEMMMFC-----QLSNVTAAVPSTPVPLTFDSLPSGVLS--GARQLGPLSTPSRVEAIQSEGVTMFVPLSREVVDGDPDGP 224
            +S+ +R   +  E++ +  +     S ++ C  GC  C  ENG  V C +   M   +SVLRV  ++FGFL VVSR+D+G+ +  +   P+  F     +CP+   F VP E MMFC     +  ++     +T     F+SLP G+    G RQL  LST  RVEA +  G   F+ +  +++D D + P
Sbjct:   17 ESVALRMKEEVSEEEISHHKGKNITSSMIFCQQGCDFCIEENGARVNCFLGEQMQATLSVLRVQEEKFGFLRVVSRLDLGSQIVGIGLDPMLAFPNLGLACPSAVQFRVPEEEMMFCIRNKTEPGSLNQTEQTTIAESFFESLPLGIFEAFGTRQLPALSTAQRVEAKEVGGGVAFLSVGVDIMDNDAEDP 207
The following BLAST results are available for this feature:
BLAST of Ggra944.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRM04.480e-2232.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..247
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:895656..896399 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra944.t1Ggra944.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 895656..896399 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra944.t1 ID=Ggra944.t1|Name=Ggra944.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=248bp
MVIKINLCFVVVTFLVCIASSFQLFTSEKSIRSVDEETESSLQSLLVRQD
NKSREKQTTDEQRSASPSFLVVCDNGCSSCSAENGTIVECSINMSTPISV
LRVVPQEFGFLNVVSRVDIGTDLFNVEGGPVTPFNIPPSSCPNPTNFTVP
SEMMMFCQLSNVTAAVPSTPVPLTFDSLPSGVLSGARQLGPLSTPSRVEA
IQSEGVTMFVPLSREVVDGDPDGPGPATAVNVGPGAAATACTAAARR*
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