Ggra922.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra922.t1
Unique NameGgra922.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length320
Homology
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BLAST of Ggra922.t1 vs. uniprot
Match: A0A2V3IMG7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG7_9FLOR)

HSP 1 Score: 246 bits (627), Expect = 1.130e-75
Identity = 173/318 (54.40%), Postives = 232/318 (72.96%), Query Frame = 0 
Query:    2 GTITGSVTNNVVVDGIACTINGATITGSVEVINGGSLSTTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSSVVQVGAGVVVGQVSLLNSGSIVVEGTATSIMNQNSGEITVTGGTVGG--ISANLGTGDVVLCDADITAVVQLVGRTGDLSAEESPSCALSTITGGVSVEKGVGDVKLDGASFPSGDLSVVDQSGDVMLTSAMVSDVIISALTGSVTLTMIDADSDFSVSGVSGSVSLMQSTVSGDVAILNCGAVSLIDSSFANENALIKGNSGPVVFSLNSDVSVEMVENDDVTVSDNTVGVASISGNAPG 317
            GTITG++ ++V+VDG++CTI GA ITGSV+VINGG+L+TTGA  XXXXXXXXXXXXXXXXXXXXXXXXXXX  SPSS + VG+  V+G++SL +SG + V G  ++++++NSG + V GGTVGG  I A LG+G++VLCDA++T  V ++ R G+L AEES SC  +TITGG+ +EKG GD ++ GA+F SGDLSVVDQ GDV +TSA++SD+ IS L GSVTL+MI+ DS                            +VS+  SSFANE+  +  N+GPV FS N+++S+E+ ENDDVT+++N + +ASIS N  G
Sbjct:   27 GTITGTIVDDVLVDGVSCTIQGAIITGSVQVINGGTLNTTGATQXXXXXXXXXXXXXXXXXXXXXXXXXXXESSPSSTIVVGSNAVLGKISLKDSGRVTVRGFVSAVLSENSGRVLVRGGTVGGGGIEAKLGSGNIVLCDANVTGSVGVIERAGNLLAEESSSCPKTTITGGILIEKGNGDARVIGANFTSGDLSVVDQIGDVTITSALLSDIGISNLDGSVTLSMIETDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSVTGSSFANESVSVITNAGPVEFSSNTELSLEISENDDVTLTNNEIAIASISSNTGG 344
The following BLAST results are available for this feature:
BLAST of Ggra922.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMG71.130e-7554.40Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:538201..539272 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra922.t1Ggra922.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 538201..539272 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra922.t1 ID=Ggra922.t1|Name=Ggra922.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=320bp
MGTITGSVTNNVVVDGIACTINGATITGSVEVINGGSLSTTGATQISGGV
LATSSGDISLQGTTTVSGVVSSTSSPSSVVQVGAGVVVGQVSLLNSGSIV
VEGTATSIMNQNSGEITVTGGTVGGISANLGTGDVVLCDADITAVVQLVG
RTGDLSAEESPSCALSTITGGVSVEKGVGDVKLDGASFPSGDLSVVDQSG
DVMLTSAMVSDVIISALTGSVTLTMIDADSDFSVSGVSGSVSLMQSTVSG
DVAILNCGAVSLIDSSFANENALIKGNSGPVVFSLNSDVSVEMVENDDVT
VSDNTVGVASISGNAPGSS*
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