Ggra6126.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6126.t1
Unique NameGgra6126.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length462
Homology
BLAST of Ggra6126.t1 vs. uniprot
Match: R7QG95 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG95_CHOCR)

HSP 1 Score: 207 bits (526), Expect = 2.350e-58
Identity = 135/375 (36.00%), Postives = 197/375 (52.53%), Query Frame = 0
Query:   67 MLLTGVVLSSHQSAASSS------SQKYTLRFLCFFASVSYFLLCLGAYGIRMQSPFLIRLAMASLGNGFGIYYLVGVELAAAWLPNHADLAIGFCQMSFGLGSIVFTGVFSKLQSSVHIEAAIYITSAILSLPGLATCMVVEWPPKTLSAPSESESEHYVHDTADGRPISWKQLPGLPLFWLYVMAISAAQAGYMFIPYFFDIGHSFKARMFAVISCFQAINLLGTMLRPFVGGVCNTLKRASGPFALGTKNFTICLLAAQLLIFIVLIPISHMAWFGAFAICSGLTVILFAAAACLSALLARELFGKNNSALIFGVGGSMAMGSGEFVA--VYAVERLVSRTVS-GPTAYNTYYYFAAAWTVVGLVASLFLRR 432
            MLL GVVLS  +     +      S+   +R      S+ +  + LG  G+ M S  L+ +A+   G  F IYYL+ +EL AAW P    LA+G   +++GLG+I F+G+F  L   V    A++IT   L      +  ++ WP K  S       E Y     +G  ISW++LP L  FW YV+AI A Q GY FIPYFF+IG SF      VI  +Q      T+ R  VG + + LK  +G F++G+KN T+ L   Q   +I LI  S    +  F   + + +++FA  A  SA+LAR++F  +NS+LIFGVG S+AMG GE ++  + A   L +R+    P  YN +Y      ++ G +  + LRR
Sbjct:    4 MLLVGVVLSGEEENTRYAALPMRFSKTQKIRIASAIGSLLFGTIGLGGIGVSMGSKSLMIIAVTLQGIPFAIYYLISLELLAAWSPARPGLAVGLGNLAYGLGTIAFSGLFEYLLERVKCSTALFITGIALVFFSAPSIALLSWPCKKCSTQG-GFPESYADVDDEGELISWRKLPFLIPFWHYVLAIFAGQTGYAFIPYFFNIGRSFGMSSTTVIRSYQIAITCSTVFRLLVGVLSDCLKWGNGFFSIGSKNVTLLLFIMQSFSYIALISFSQTLNYDGFVFSASVILMVFAGVAVESAVLARDIFSPSNSSLIFGVGASIAMGIGEVMSGKIMAAVDLSARSAELSPEKYNMFYVIGVVLSIQGFLVCIMLRR 377          
BLAST of Ggra6126.t1 vs. uniprot
Match: A0A2V3IG41 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG41_9FLOR)

HSP 1 Score: 193 bits (490), Expect = 9.620e-55
Identity = 105/237 (44.30%), Postives = 159/237 (67.09%), Query Frame = 0
Query:   16 KNVAVSMLVMFLTGALYDLGVYNLAVDKALGSTDA---IWSSSMAYSSVTGTVTMLLTGVVLSS----HQSAASSSSQKYTLRFLCFFASVSYFLLCLGAYGIRMQSPFLIRLAMASLGNGFGIYYLVGVELAAAWLPNHADLAIGFCQMSFGLGSIVFTGVFSKLQSSVHIEAAIYITSAILSLPGLATCMVVEWPPKTLSAP-SESESEHYVHD-TADGRPISWKQLPGLPLFWL 243
            KNV +   +MF+ G    LGVYNLA++++   +DA   +W+SSMAY+++T T++++  G+ LS        A+  +S+   +R   F A++S+ LL LG  GI  +SP LI+L ++SLG GFGI YL+G ELA AWLPN+  LAIG CQ+++GLGS+V + V+S+  S+ ++  A+Y+T+AI+SLP  A+ M+VEWP    S   S+SE +  + +   DGRP++WK LP L +FWL
Sbjct:   11 KNVFIVSTIMFIIGGTTVLGVYNLAIEESASDSDALDGVWTSSMAYNNITCTISLMACGLFLSQGCDESDPASPWASRTSRIRIALFTAAISFSLLGLGGLGIAFESPLLIKLGLSSLGFGFGICYLLGGELATAWLPNNPGLAIGLCQLAYGLGSVVLSDVYSRFVSNTNVARAVYLTTAIMSLPCFASVMLVEWPELPCSEEASKSEDDPLLSNHLPDGRPLTWKTLPCLTVFWL 247          
BLAST of Ggra6126.t1 vs. uniprot
Match: A0A7S1ET46 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET46_9RHOD)

HSP 1 Score: 118 bits (296), Expect = 6.860e-25
Identity = 126/497 (25.35%), Postives = 209/497 (42.05%), Query Frame = 0
Query:   12 VKTVKNVAVSMLVMFLTGALYDLGVYNLAVDKALGSTDAIWSSSMAYSSVTGTVTMLLTGVVLSSHQSAASSSSQKYTLRFLCFFASVSYFLLCLGA--YGIRMQSPFLIRLAMASLGNGFGIYYLVGVELAAAWLPNHADLAIGFCQMSFGLGSIVFTGVFSKLQSSVHIEAAIYITSAILSLPGLATCMVVEWPPKTLS----------APSES-----------ESEHYVHDTAD---GRPISWKQLPGLPLFWLYVMAISAAQAGYMFIPYFFDI-GHSFKARMFAVISCFQAINLLGTMLRPFVGGVCNTLKRASGPFALGTKNFTICLLAAQLLIFIVLIPISHMAWFGAFAICSGLTVILFAAAACLSALLARELFGKNNSALIFGVGGSMAMG----------------SGEFVAVYAVERLVSRTVSGPTAYNTYYYFAAAWTVVGLVASLFLRRSPEVFSREDGMLITDYGST----KRVLDDLPDV 461
            ++ +  V +  L+M L G  Y L +++L +        + ++  +   S    V +L+ G VL ++      S  K  L        +S  +L +    YG+    P L+    A  G G G  Y+VGVELAA W+P    +A+G    S GLGSI  + +FS     + IE   +    +   P L     + +PP T +          APS++           E EH+  D A    GR +    L    L++L V+  S    GY  +  F  I G SF        S F  + +LG + R   G   + +    G F+ G KN  I +L    L   +     +  +F  F  C  +  + F+A + ++A+LAR++F   NS+L+FG+ G +  G                + E   + A++  +   V   +A+  Y++   A+ ++GL ++L L R    F      L++  G      +R   DLPD+
Sbjct:   45 IRWITAVPMCCLLMLLFGVSYGLAMFSLPIKDRSVVLLSAFTGGLGVQSFCVAVCVLVGGYVLDTYP-----SRMKTVLLI-----GLSIVILTISGMIYGLSANHPLLLYWCTAISGFGLGSVYIVGVELAARWMPEAIGIAMGLGMGSIGLGSIFGSQIFSLFVQIMSIEQGFFSGMVLFVAPVLILLPFISFPPPTFNPASVTAAAPPAPSDAVESSNTTSPNHEHEHH-SDYAPRLVGRKLGLSLLKQPSLWFLVVLVASLCGPGYGALVSFPSILGVSFSVGQSQAASLFALLQVLGMIARFGAGFCVDYIGFGYGYFSSGAKNMAILMLTLNSLGLFLAPVFQYYGYFQCFFACIVMIYVSFSACSIVAAVLARQIFSPANSSLVFGIAGGLFAGFCTMVFSLLSAGVLSSAQEKARIAAMDSGLDSVVIPSSAFTPYFHICGAFCLLGLFSTLVLPRCAAAFE-----LVSKQGDKIVFIEREEKDLPDL 525          
BLAST of Ggra6126.t1 vs. uniprot
Match: A0A7S2ZMJ0 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMJ0_9RHOD)

HSP 1 Score: 97.4 bits (241), Expect = 3.520e-18
Identity = 119/452 (26.33%), Postives = 195/452 (43.14%), Query Frame = 0
Query:    6 TRDEISVKTVKNVAVSMLVMFLTGALYDLGVY--NLAVDKALGSTDAIWSSSMAYSSVTGTVTMLLTGVVLSSHQSAASSSSQKYTLRFLCFFASVSYFLLCLGAYGIRMQSPFLIRLAMASLGNGFGIYYLVGVELAAAWLPNHADLAIGFCQMSFGLGSIVFTGVFSKLQSSVHIEAAIYITSAILSLPGLATCMVVEWPPKTLSAPSESESEHYVHDTADGRPIS------WKQLPGLPLFWLYVMAISAAQA-GYMFIPYF-------FDIGHSFKARMFAVISCFQAINLLGTMLRPFVGGVCNTLKRASGPFALGTKNFTICLLAAQLLIFIVLIPISHMAWFGAFAICSGLTVILFAAAACLSALLARELFGKNNSALIFGVGGSMAMGSGEFVAVYAVERLVSRTVSGP----TAYNTYYYFAAAWTVVGLVASLFLRRSPEVF 437
            ++ +IS + +  +A    + FL G+LY +  +  N  V K + S   + + + A    +G V +L +GV L +    ASS                    L L A G      +L  L     G  FG+ Y+  +        ++     G    S  LGSIV   V+S  Q  +    ++      + L   A  + +     T +   E + E  V   +D +P +      W+ L   P  + +++  SAA   GY     F       F +  S   R F +++   ++ L+G +   F G +   LK   G F+ G  N T  LL  Q +   VL+  S    F AF ICS +T  +F   A   ALLAR LFG  N++L+FG  G +A+G G+ ++ + +++      SG     ++Y  + Y +  WT+ G+VA LF+R+S + F
Sbjct:   16 SKMQISKRQLLVLASCCTLQFLFGSLYAMSAFVPNAPVPKQMISLLGVMACATAIGISSGGV-LLHSGVCLRTLSLIASSMQLG----------------LLLVAMGFSQSLVWLTYLGAIMTGTSFGVLYIAAITQLQHEFRDNPGAVTGVGMFSSSLGSIVLAFVYSICQEELTWLQSLIACGVSMFLANGAASLSL-----TSALEDEVQDEESVPLLSDQKPDNSVKLGIWEILRD-PNMYFFLLTFSAAVGPGYGTAVGFQQMSVDVFSLSSSESNRYFLLVT---SLGLIGRLGAGFGGDI---LKTEKGVFSSGALNVTGLLLVLQSVA--VLLMQSFPTSFYAFVICSCITYFVFTGGAVTGALLARNLFGIANASLVFGFTG-LAVGGGDLLSSWLIKQHAGEVPSGDPSLLSSYGEFIYVSIFWTLAGVVALLFIRKSKKAF 435          
BLAST of Ggra6126.t1 vs. uniprot
Match: A0A7S1XHM5 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XHM5_9RHOD)

HSP 1 Score: 73.6 bits (179), Expect = 2.650e-10
Identity = 91/354 (25.71%), Postives = 148/354 (41.81%), Query Frame = 0
Query:  110 GIRMQSPFLIRLAMASLGNGFGIYYLVGVELAAAWLPNHADLAIGFCQMSFGLGSI----VFTGVFSKLQSS----VHIEAAIYITSAILSLPGLATCMVVEWPPKTLSAPSESESEHYVHDTADGRPISWKQLPGLPLFWLY-VMAISAAQAGYMFIPYF-------FDIGHSFKARMFAVISCFQAINLLGTMLRPFVGGVCNTLKRAS-GPFALGTKNFTICLLAAQLLIFIVLIPISHMAWF-----GAFAICSGLTVILFAAAACLSALLARELFGKNNSALIFGVGGSMAMGSGEFVAVYAVE-RLVSRTVSGPTAYNTYYYFAAAWTVVGLVASLFLRRSPEVFSRE 440
            G R  SP L+ LA    G G G++Y++GV L AAWLP++   A+G    S G G+I        +  +L++S    + +   +Y+   I +LP  A    ++W P++ S PS + S+       D       +L      W + V+   A    Y +I  F         +  +       + + F A+N +  +L  F GG    L     G    G KN T+  L  Q +   +L  I+  +       G    C  +    FA  +  SA+LAR +F   N +  FG+    A GSG  V  + +   L   + +G +    ++  A   + +GLV +  + R  E F  E
Sbjct:  105 GARFASPALVLLAPTFAGLGNGLFYMIGVTLNAAWLPDYPGFAMGLAFGSLGAGTIGSSFAMQIILKRLRNSPARALLVFFVLYLAILIAALP-FAKLPDLKWDPRS-SKPSAATSKSATAPRNDEGVWLGARLLLTRTMWAFGVIMFGATGPVYGYIAAFPAATRASLSVSSAETCDASCIAAQFAAMNAV-VLLGRFGGGYLVDLCAVGRGWLWSGAKNVTMVALLVQTIALAILYDIARSSRVSSDSDGIVLACIAVLFGTFALVSTSSAVLARHMFSPVNGSAAFGLSMG-ASGSGTTVFSFIMAGALAQPSKAGASPLRMFFLVAFVASALGLVGACLIDRCAEAFCTE 454          
The following BLAST results are available for this feature:
BLAST of Ggra6126.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
R7QG952.350e-5836.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IG419.620e-5544.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1ET466.860e-2525.35Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S2ZMJ03.520e-1826.33Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S1XHM52.650e-1025.71Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 373..392
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 393..411
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 338..361
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 241..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..150
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 333..337
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 412..430
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 263..313
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 431..461
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 362..372
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 314..332
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..182
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 205..240
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 180..202
NoneNo IPR availableTMHMMTMhelixcoord: 116..138
NoneNo IPR availableTMHMMTMhelixcoord: 374..396
NoneNo IPR availableTMHMMTMhelixcoord: 240..262
NoneNo IPR availableTMHMMTMhelixcoord: 272..294
NoneNo IPR availableTMHMMTMhelixcoord: 151..170
NoneNo IPR availableTMHMMTMhelixcoord: 314..336
NoneNo IPR availableTMHMMTMhelixcoord: 17..39
NoneNo IPR availableTMHMMTMhelixcoord: 411..430
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 340..362
NoneNo IPR availableTMHMMTMhelixcoord: 89..111
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 21..436

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:612094..613570 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6126.t1Ggra6126.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 612094..613570 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6126.t1 ID=Ggra6126.t1|Name=Ggra6126.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=462bp
MTAPLTRDEISVKTVKNVAVSMLVMFLTGALYDLGVYNLAVDKALGSTDA
IWSSSMAYSSVTGTVTMLLTGVVLSSHQSAASSSSQKYTLRFLCFFASVS
YFLLCLGAYGIRMQSPFLIRLAMASLGNGFGIYYLVGVELAAAWLPNHAD
LAIGFCQMSFGLGSIVFTGVFSKLQSSVHIEAAIYITSAILSLPGLATCM
VVEWPPKTLSAPSESESEHYVHDTADGRPISWKQLPGLPLFWLYVMAISA
AQAGYMFIPYFFDIGHSFKARMFAVISCFQAINLLGTMLRPFVGGVCNTL
KRASGPFALGTKNFTICLLAAQLLIFIVLIPISHMAWFGAFAICSGLTVI
LFAAAACLSALLARELFGKNNSALIFGVGGSMAMGSGEFVAVYAVERLVS
RTVSGPTAYNTYYYFAAAWTVVGLVASLFLRRSPEVFSREDGMLITDYGS
TKRVLDDLPDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf