Ggra6095.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6095.t1
Unique NameGgra6095.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length418
Homology
BLAST of Ggra6095.t1 vs. uniprot
Match: A0A2V3IZA5 (Rubredoxin-like domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZA5_9FLOR)

HSP 1 Score: 302 bits (773), Expect = 8.430e-98
Identity = 169/271 (62.36%), Postives = 202/271 (74.54%), Query Frame = 0
Query:  152 MCKVAFVSAFYGAQVSSTST-EAQYLQRKPLKRAHHVTRTRSLPARMALPSASNTQRSSRPRRVIGIIGKSATQEKKNVSVETDSAQSTGILGFKTKAHWEGIGVLPLFFVGFGFVALAIKMFKVKSGEWSSGPSAVNKVTVPKTAITSSEEEAELHVFKCGGCGYEMYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDPDDXXXXXXXXXXXXXAE---EL-VGKDGSVQDTTSESGDAESLRSESGSNAGNEGTSTTAKDRSDSDTST 417
            M + AFVSAF GA++   S       Q  P+KR H   R    PA M +P+  N ++S+R RRVIG++GKSAT+EKK V+VE++SAQSTGI GFK KAHW+GIGV PL F GFG  AL IKM KV++GEW+SG S VNKVT+PK+AIT+ EEEAELH+FKCGGCG+EMYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDPDD      XXXXXXX E   EL   +DG+ +  T E+G ++SLR+ESGS   NE T +T  D +DSD ST
Sbjct:    1 MSQTAFVSAFSGAKLLRHSQGRGPGEQCLPVKRTHRTPRRGQQPAHMTIPAIPNAKQSARSRRVIGVVGKSATKEKKTVTVESESAQSTGIFGFKPKAHWDGIGVFPLVFAGFGVAALVIKMLKVRTGEWASGSSGVNKVTLPKSAITTQEEEAELHIFKCGGCGFEMYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDPDDPRNQEEXXXXXXXXEIETELQTSEDGASE--TGETGSSDSLRAESGSAPSNESTGSTPTDCADSDKST 269          
BLAST of Ggra6095.t1 vs. uniprot
Match: A0A7S0BL49 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BL49_9RHOD)

HSP 1 Score: 122 bits (307), Expect = 3.220e-28
Identity = 84/215 (39.07%), Postives = 109/215 (50.70%), Query Frame = 0
Query:  141 KLEEARKRTERMCKVAFVSAFYGAQVSSTSTEAQYLQRKPLKRAHHVTRTRSLPARMALPSASNTQRSSRPRRVIGIIGKSATQEKKNVSVETDSAQSTGIL-GFKTKAHWEG-IGVLPLFFVGFGFVALAIKMFKVKSGEWSSGPSAVNKVTVPKTAITSSEEEAELHVFKCGGCGYEMYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDPDD 353
            K++EAR++ E +           A  S   T A ++Q   L R      T  +P R A   AS ++   R   V    G + TQE K V +   +     I         + G +G + L+F  F   AL +K  + K  E +      N+     T ITS E EAELH+FKCG CGYEMYPAR REFKFFPD FKCP+CG+ K  FWDLNDP+D
Sbjct:   16 KIDEAREKDEGII----------ATDSWGGTMAAFVQGIGLSRVARPGSTPRVPRREAFVCASASEPGLRQIEVAS--GTTRTQETKLVVLVAANGAGAEIEEDINVFERYAGSVGYVWLYFGAFCSAALGLKWLRKKQMEMN------NEKPKNPTIITSEEMEAELHIFKCGACGYEMYPARTREFKFFPDDFKCPVCGSGKEYFWDLNDPND 212          
BLAST of Ggra6095.t1 vs. uniprot
Match: A0A7S0XK09 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XK09_9RHOD)

HSP 1 Score: 111 bits (277), Expect = 7.870e-25
Identity = 55/109 (50.46%), Postives = 68/109 (62.39%), Query Frame = 0
Query:  245 KTKAHWEGIGVLPLFFVGFGFVALAIKMFKVKSGEWSSGPSAVNKVTVPKTAITSSEEEAELHVFKCGGCGYEMYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDPDD 353
            +    +EG+G+    F+   F  +     KV  G     P     V +P + ITS+E+E ELHV+KC GCGYE+Y ARGREFKFF DSFKCP+CGT KS FWDLND  D
Sbjct:   92 RVDIDFEGMGIYLYIFLAICFGGIV----KVVRGTLYKEP-----VKLPDSVITSAEQEKELHVYKCEGCGYELYVARGREFKFFGDSFKCPVCGTDKSGFWDLNDESD 191          
BLAST of Ggra6095.t1 vs. uniprot
Match: A0A5J4YS59 (Rubredoxin-like domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YS59_PORPP)

HSP 1 Score: 107 bits (267), Expect = 5.070e-23
Identity = 56/141 (39.72%), Postives = 81/141 (57.45%), Query Frame = 0
Query:  214 VIGIIGKSATQEKKNVSVETDSAQSTGILGFKTKAHWEGIGVLPLFFVGFGFVAL-AIKMFKVKSGEWSSGPSAVNKVTVPKTAITSSEEEAELHVFKCGGCGYEMYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDPDD 353
            ++ +   ++++EK  VS+  D                E +G++P  F     VAL A+K+FK   G      +   +   PK    + +EE ELHV+KCGGCGYE++ ARGREFKFF D++KCP+C   K++FWDLNDP D
Sbjct:   82 LVAMASAASSEEKGKVSINIDL---------------ERMGIIPYMFAV--IVALFAVKLFKSIGGGTKEKETESER---PKAVALTEDEEKELHVYKCGGCGYELWVARGREFKFFGDNYKCPVCDADKTQFWDLNDPTD 202          
BLAST of Ggra6095.t1 vs. uniprot
Match: L1J0K1 (Rubredoxin-like domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J0K1_GUITC)

HSP 1 Score: 99.4 bits (246), Expect = 3.570e-21
Identity = 55/105 (52.38%), Postives = 66/105 (62.86%), Query Frame = 0
Query:  252 GIGVLPLFFVGFGFVALAIKMFKVKSGEWSSGPSAV-NKVT--VPKTAITSSEEEAELHVFKCGGCGYEMYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDPDD 353
            G+G  P +    G + + +KM K K      G S + NK T  +P+T     +E  ELHVF CGGCGYEM PARGRE KFFPD FKCP+CG  K EFWD NDP+D
Sbjct:   46 GMGQAPFWVAVIGGLTV-LKMVKQKM----EGRSILDNKDTKYIPQT----DQELEELHVFACGGCGYEMMPARGREGKFFPDKFKCPICGAGKEEFWDKNDPND 141          
BLAST of Ggra6095.t1 vs. uniprot
Match: A0A7S0H9K5 (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H9K5_9CRYP)

HSP 1 Score: 98.6 bits (244), Expect = 2.320e-20
Identity = 55/103 (53.40%), Postives = 65/103 (63.11%), Query Frame = 0
Query:  252 GIGVLPLFFVGFGFVALAIKMFKVKSGEWSSGPSAV-NKVT--VPKTAITSSEEEAELHVFKCGGCGYEMYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDP 351
            G+G  P +    G + + +KM K K      G S + NK T  +P+T     EE  ELHVF CGGCGYEM PARGRE KFFPD+FKCP+CG  K EFWD NDP
Sbjct:   94 GMGQAPFWVAVIGGLTV-LKMVKQKM----EGRSILDNKDTKYIPQT----EEELEELHVFACGGCGYEMMPARGREGKFFPDNFKCPICGASKEEFWDKNDP 187          
BLAST of Ggra6095.t1 vs. uniprot
Match: A0A7J7IMV8 (Rubredoxin-like domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMV8_9RHOD)

HSP 1 Score: 98.2 bits (243), Expect = 1.250e-19
Identity = 54/141 (38.30%), Postives = 71/141 (50.35%), Query Frame = 0
Query:  220 KSATQEKKNVSVETDSAQSTG-------ILGFKTKAHWEGIGVLPLFFVGFGFVALAIKMFKVKSGEWSSGPSAVNKVTVPKTAITSSEEEAELHVFKCGGCGYEMYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDPDD 353
            K   +EKK      +  ++ G       +LG    A W        F +G   V L +    V+  +  + P    K          +E + ELHV++CG CGY +YPARGRE KFFP +FKCP C  PKSEFWDLNDP+D
Sbjct:  105 KKLAEEKKKSEHAVEEKRAFGPSWKFLDLLGSPASAFW--------FLMGIFIVFLNVLRRLVRRKKAENVPIGSEKYR--------AESDEELHVYRCGQCGYTLYPARGRELKFFPKTFKCPQCSAPKSEFWDLNDPND 229          
BLAST of Ggra6095.t1 vs. uniprot
Match: M2WXM4 (Rubredoxin-like domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WXM4_GALSU)

HSP 1 Score: 95.5 bits (236), Expect = 3.770e-19
Identity = 51/151 (33.77%), Postives = 89/151 (58.94%), Query Frame = 0
Query:  214 VIGIIGKSATQEKKNVSVETDSAQSTGI-LGFKTKAHWEGIGVLPLFFVGFGFVALAIKMF----KVKSGEWSSGPSAVNKVT------VP--KTAITSSEEEAELHVFKCGGCGYEMYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDP 351
            V+ ++ K +++ + +V++ + S+    + LG K+    + +G LP +  G  F+ + I+++    K K  E +   +++ + +      +P  KT +   +E + LHVFKC  CGY ++PA+GREFKFF DSFKCP CG+ K  F+D +DP
Sbjct:   53 VLQVVKKDSSKTETSVALSSSSSDKGEVKLGLKS----DSLGTLPFWVFGAVFI-VGIRLYTNKHKKKKEEAAERKNSLGETSEVETERIPEKKTILEEEQENSALHVFKCANCGYSLFPAKGREFKFFTDSFKCPACGSTKEAFYDTSDP 198          
BLAST of Ggra6095.t1 vs. uniprot
Match: M1VCH9 (Rubredoxin-like domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1VCH9_CYAM1)

HSP 1 Score: 96.3 bits (238), Expect = 6.650e-19
Identity = 61/166 (36.75%), Postives = 85/166 (51.20%), Query Frame = 0
Query:  190 TRSLPARMALPSASNTQRSSRPRRVIGIIGKSATQEKKNVSVETDSAQSTGIL----GFKTKAHWEGIGVLPLFFVGFGFVALAIKMFKVKSGEWSSGPSAVNKVTVPKTAITSSEEEAELHVFKCGGCGYEMYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDP 351
            TR++  R+  P  + T+ +   R      G      +K+  +E    QST  +    GFK      G  +   +F+G G V L++ + +   G        V  +        +S + AELHV++CG CGY +YPARGRE KFFP +FKCP C  PKSEFWDLNDP
Sbjct:   80 TRTVSVRLPRPPLNTTELTLVAR------GSKRKTPEKDRKLEQKPEQSTSPMLNLNGFKLP----GTPISSFWFLG-GVVVLSLGILRRLLGS-----KEVAHIPAGSVRYRASND-AELHVYRCGKCGYTLYPARGRELKFFPRTFKCPQCSAPKSEFWDLNDP 228          
BLAST of Ggra6095.t1 vs. uniprot
Match: R7QJN1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJN1_CHOCR)

HSP 1 Score: 87.8 bits (216), Expect = 6.490e-18
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query:  318 MYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDPDD 353
            MYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDPDD
Sbjct:    1 MYPARGREFKFFPDSFKCPLCGTPKSEFWDLNDPDD 36          
The following BLAST results are available for this feature:
BLAST of Ggra6095.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZA58.430e-9862.36Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A7S0BL493.220e-2839.07Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0XK097.870e-2550.46Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4YS595.070e-2339.72Rubredoxin-like domain-containing protein n=1 Tax=... [more]
L1J0K13.570e-2152.38Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A7S0H9K52.320e-2053.40Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7J7IMV81.250e-1938.30Rubredoxin-like domain-containing protein n=1 Tax=... [more]
M2WXM43.770e-1933.77Rubredoxin-like domain-containing protein n=1 Tax=... [more]
M1VCH96.650e-1936.75Rubredoxin-like domain-containing protein n=2 Tax=... [more]
R7QJN16.490e-18100.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.28.10coord: 306..346
e-value: 4.3E-6
score: 28.4
NoneNo IPR availablePIRSRPIRSR000071-1PIRSR000071-1coord: 309..346
e-value: 0.0057
score: 13.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..417
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..247
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 271..417
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 248..270
NoneNo IPR availableSUPERFAMILY57802Rubredoxin-likecoord: 306..349
NoneNo IPR availableTMHMMTMhelixcoord: 248..270
IPR024934Rubredoxin-like domainPROSITEPS50903RUBREDOXIN_LIKEcoord: 306..348
score: 9.98048

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:535055..536499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6095.t1Ggra6095.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 535055..536499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6095.t1 ID=Ggra6095.t1|Name=Ggra6095.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=418bp
MQMPLRLAVPAALRKTTKKGVDGDDLGSVKTTIGEGEIDIFVSQSRLMSS
APRPRKPMEPEGGRYVRDPMRYRITVDCYGSGCPHGAHFVVYLRSGPSDF
TDLRNASPLCRLSTSLRNLPPVEAVILEHPVLQHQITTPVKLEEARKRTE
RMCKVAFVSAFYGAQVSSTSTEAQYLQRKPLKRAHHVTRTRSLPARMALP
SASNTQRSSRPRRVIGIIGKSATQEKKNVSVETDSAQSTGILGFKTKAHW
EGIGVLPLFFVGFGFVALAIKMFKVKSGEWSSGPSAVNKVTVPKTAITSS
EEEAELHVFKCGGCGYEMYPARGREFKFFPDSFKCPLCGTPKSEFWDLND
PDDPRNQESEEEEGSEAEELVGKDGSVQDTTSESGDAESLRSESGSNAGN
EGTSTTAKDRSDSDTST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024934Rubredoxin-like_dom