Ggra6205.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6205.t1
Unique NameGgra6205.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length286
Homology
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BLAST of Ggra6205.t1 vs. uniprot
Match: A0A2V3IF96 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF96_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 6.510e-30
Identity = 68/199 (34.17%), Postives = 111/199 (55.78%), Query Frame = 0 
Query:   65 IIAPSSYQAANISRSRLAYNPTPAVATVVNLPRSRSVNISVTLSGSVDLEGVLASHIETEIEKTVANSSRRIKDFFNKEKEALKNRAGDRYFFFFQAAANFGYSDNRETREMIQTVEFDHFTNQSALMLNSCNQHDLKGTYSVRLELASTGRPRRLSLKPYLYFPRVTLTSGKIMQVVANSSRLGIADQYGNIFDDIHH 263
            ++AP++ Q A I RSRL Y  T   A+   +P  R +  S +L G+V + G LAS IE   E+       R+++F+  EK  L++RAGD YF FFQAA +FG+++++ TR+ + + ++  F+ +  + L S     L   YSV     S G  R +    Y+   ++TL+SG+I+ +V  +  L + DQ  N+ D I +
Sbjct:   62 MLAPTTAQVAGIERSRLGYIQTSRAASGF-IPPGRGITFSASLEGNVSMTGSLASDIEDATERIALGEPDRVREFYRTEKRNLQSRAGDNYFHFFQAARDFGFTEDQTTRDTLNSTDYAQFSEKVGVELGSSFLGSLNSRYSVTYSGVSDGNQRVIQAFAYVLINQITLSSGRILNIVQKNPELVVTDQEFNVIDRIEN 259
The following BLAST results are available for this feature:
BLAST of Ggra6205.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IF966.510e-3034.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..61
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..285
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:1256216..1257073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6205.t1Ggra6205.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 1256216..1257073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6205.t1 ID=Ggra6205.t1|Name=Ggra6205.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=286bp
MANRVSRTLVILAVLCFISSAIAAPPLSVSDLMKFLEGRQDLEPTPEEPD
STPTVEPPISDPNSIIAPSSYQAANISRSRLAYNPTPAVATVVNLPRSRS
VNISVTLSGSVDLEGVLASHIETEIEKTVANSSRRIKDFFNKEKEALKNR
AGDRYFFFFQAAANFGYSDNRETREMIQTVEFDHFTNQSALMLNSCNQHD
LKGTYSVRLELASTGRPRRLSLKPYLYFPRVTLTSGKIMQVVANSSRLGI
ADQYGNIFDDIHHVDLSNADKLGSNGVCANSLDSI*
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