Ggra6104.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6104.t1
Unique NameGgra6104.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length192
Homology
BLAST of Ggra6104.t1 vs. uniprot
Match: A0A2V3ISZ0 (Ubiquitin thioesterase OTU1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISZ0_9FLOR)

HSP 1 Score: 307 bits (786), Expect = 1.630e-104
Identity = 148/191 (77.49%), Postives = 167/191 (87.43%), Query Frame = 0
Query:    1 MNINSHRRTPVFTPVPSAPLASTFRKTTRRLIWYATAIPFATVTPPLRVVPVRGDGRCLYRAIAKNLASSDGRRLSENLERADADALRDIAWREICVERKKEFRAKHIIEGSHSSYCASMRNPRFYAGEPEMLALADALKRPIMVYLRTTQGQLRNIVTYGENYSKGRFSARKIIRVLYMNGNHYDALLPR 191
            MN  S RRTPVF P+P+AP+    R T RR  +YAT +P ATVTPPLRVVPV GDGRCLYRAIAKNLASSDGRRLSE+LERADADALRDIAWREIC++R+KEFR++ ++EGS S+YCA+MRNPRFYAGE EMLALAD L+RPIMVYLRTTQGQLRNIVTYGE Y KG+ S R+ IRVLY+NGNHYDALLPR
Sbjct:    1 MNFFSRRRTPVFAPIPNAPMPEKLRITARRFFFYATTLPTATVTPPLRVVPVTGDGRCLYRAIAKNLASSDGRRLSEHLERADADALRDIAWREICIDRRKEFRSRQVVEGSLSAYCANMRNPRFYAGEAEMLALADVLRRPIMVYLRTTQGQLRNIVTYGEKYGKGKRSTRRTIRVLYINGNHYDALLPR 191          
BLAST of Ggra6104.t1 vs. uniprot
Match: R7QTE7 (Ubiquitin thioesterase OTU1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTE7_CHOCR)

HSP 1 Score: 221 bits (563), Expect = 1.510e-70
Identity = 122/191 (63.87%), Postives = 138/191 (72.25%), Query Frame = 0
Query:    7 RRTPVFTPVPSAPLASTFRKTTRRLIWYATAIPFATVTP----PLRVVPVRGDGRCLYRAIAKNLASSDGRRLSENLERADADALRDIAWREICVERKKEFRAKHIIEGSHSSYCASMRNPRFYAGEPEMLALADALKRPIMVYLRTTQGQLRNIVTYGENYSK--GRFSARKIIRVLYMNGNHYDALLPR 191
            RR  VF+P P  P A+    T+RRL+  A   P   + P     L+VVPVRGDGRCLYRAIAK LA+S+GRRL+ENLERADADALR +AW+ ICV+R KEF AKH+IEGS SSYC  MR P FYAGE EMLAL D LK PI VYL    G+LRNIVTYGE Y K  GR S    +RVLY NGNHYDAL+PR
Sbjct:    6 RRFIVFSPTPQVPFANRLAYTSRRLLSLAFNQP--PIQPVRASSLQVVPVRGDGRCLYRAIAKGLANSEGRRLTENLERADADALRSLAWKAICVDRTKEFAAKHVIEGSISSYCRQMRAPTFYAGEAEMLALVDVLKVPIKVYLNHG-GELRNIVTYGEKYKKRKGRLSRDIAVRVLYANGNHYDALVPR 193          
BLAST of Ggra6104.t1 vs. uniprot
Match: A0A5J4Z7U5 (Ubiquitin thioesterase OTU1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7U5_PORPP)

HSP 1 Score: 160 bits (406), Expect = 2.430e-46
Identity = 78/146 (53.42%), Postives = 106/146 (72.60%), Query Frame = 0
Query:   47 LRVVPVRGDGRCLYRAIAKNLASSDGRRLSENLERADADALRDIAWREICVERKKEFRAKHIIEGSHSSYCASMRNPRFYAGEPEMLALADALKRPIMVYLRTTQGQLRNIVTYGENYSKGRFSAR-KIIRVLYMNGNHYDALLPR 191
            +RVV ++GDGRC++RAIA+NLA+ DGR LSE  ER DAD LR+ A++ +CVE+KKEF+A ++IEG+   YCA MR+P FY GE EM  LAD L++PI VYL   + Q + I+ YGE Y K   + R + I++LY   NHY+AL+ R
Sbjct:   78 VRVVRIKGDGRCMFRAIARNLAAFDGRNLSEGAERQDADFLRNAAYKVVCVEKKKEFQASYLIEGNIDHYCAQMRSPSFYGGETEMFILADLLQKPIAVYLPAGRSQFQKIICYGEKYLKKMPNGRSETIKLLYNGTNHYEALIDR 223          
BLAST of Ggra6104.t1 vs. uniprot
Match: A0A7J7IMU1 (OTU domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMU1_9RHOD)

HSP 1 Score: 160 bits (405), Expect = 2.570e-46
Identity = 87/146 (59.59%), Postives = 103/146 (70.55%), Query Frame = 0
Query:   47 LRVVPVRGDGRCLYRAIAKNLASSDGRRLSENLERADADALRDIAWREICVERKKEFRAKHIIEGSHSSYCASMRNPRFYAGEPEMLALADALKRPIMVYLRTTQGQ-LRNIVTYGENYSKGRFSARKIIRVLYMNGNHYDALLPR 191
            LR+VP  GDGRCL+RAIAK LA    R L ENLERADAD LR+ A++EIC  R++EF+ KH+IEG   +YCA +R+P FYAGEPEM ALAD L+RPI VYL   Q + L  IV YG  YSK +    + IRV Y   NHY ALLPR
Sbjct:   67 LRLVPTTGDGRCLFRAIAKCLAFYGKRPLPENLERADADVLREAAFQEICQLRRQEFQKKHVIEGDIRAYCAQLRSPEFYAGEPEMYALADVLERPIEVYLVHPQNRTLLKIVEYGTAYSKKKIG-NEPIRVAYNGTNHYSALLPR 211          
BLAST of Ggra6104.t1 vs. uniprot
Match: M1VHG0 (OTU domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1VHG0_CYAM1)

HSP 1 Score: 159 bits (402), Expect = 8.200e-46
Identity = 87/150 (58.00%), Postives = 106/150 (70.67%), Query Frame = 0
Query:   45 PP--LRVVPVRGDGRCLYRAIAKNLASSDGRRLSENLERADADALRDIAWREICVERKKEFRAKHIIEGSHSSYCASMRNPRFYAGEPEMLALADALKRPIMVYLRTTQGQ-LRNIVTYGENYSKGRFSARKIIRVLYMNGNHYDALLPR 191
            PP  LR+VP  GDGRCL+RAIAK LA    R L E+LERADADALR+ A++EIC+ R++EF+ KH++EG   +YCA +R+P FYAGEPEM ALAD L+RPI VYL   Q + L  IV YG  Y K R    + +RV Y   NHY ALLPR
Sbjct:   67 PPEALRLVPTTGDGRCLFRAIAKCLAFYGKRPLPEHLERADADALREAAFQEICLLRRQEFQKKHVVEGDMGAYCAQLRSPEFYAGEPEMFALADVLERPIEVYLVHPQNRTLLKIVEYGSVYRK-RQQDLEPVRVAYNGTNHYSALLPR 215          
BLAST of Ggra6104.t1 vs. uniprot
Match: A0A6T9YRP3 (Ubiquitin thioesterase OTU1 n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A6T9YRP3_9RHOD)

HSP 1 Score: 156 bits (395), Expect = 9.070e-46
Identity = 78/139 (56.12%), Postives = 101/139 (72.66%), Query Frame = 0
Query:   52 VRGDGRCLYRAIAKNLASSDGRRLSENLERADADALRDIAWREICVERKKEFRAKHIIEGSHSSYCASMRNPRFYAGEPEMLALADALKRPIMVYLRTTQGQLRNIVTYGENYSKGRFSARKIIRVLYMNGNHYDALLP 190
            +RGDGRCL+RAIA+N+A+ +GR LSE+ ER DAD LR  A + ICV+RK+EFR   +IEGS  SYC++MR+P FY GE EM  L++ L++PI V+L  + G+ R IV YG+ + KG     K IRVLY   NHYDALLP
Sbjct:    4 IRGDGRCLFRAIARNIAAQEGRELSEHFEREDADFLRMSAHKVICVDRKEEFRTNMLIEGSVDSYCSAMRSPSFYGGELEMHILSELLQKPIAVFLAESMGRFRRIVEYGDQFRKG---GEKPIRVLYNGVNHYDALLP 139          
BLAST of Ggra6104.t1 vs. uniprot
Match: A0A7S3A5A5 (Ubiquitin thioesterase OTU1 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5A5_9RHOD)

HSP 1 Score: 152 bits (384), Expect = 2.920e-43
Identity = 75/142 (52.82%), Postives = 101/142 (71.13%), Query Frame = 0
Query:   48 RVVPVRGDGRCLYRAIAKNLASSDGRRLSENLERADADALRDIAWREICVERKKEFRAKHIIEGSHSSYCASMRNPRFYAGEPEMLALADALKRPIMVYLRTTQGQLRNIVTYGENYSKGRFSARKIIRVLYMNGNHYDALL 189
            R++ V+GDGRCL+R+IAKNLA   GR L E LE+ DADALR+ A++ ICV++++EFR K IIEG  ++YC  MRNP FY GEPEM  LA+ L+ PI VYL+ +  + + +V YG  ++K     +  IRVLY   NHYDAL+
Sbjct:   67 RILRVKGDGRCLFRSIAKNLALFGGRSLPERLEKQDADALREAAFQVICVDKREEFRKKGIIEGDIANYCTRMRNPDFYGGEPEMFVLAEVLQTPIGVYLQISHNKFQKLVMYGAQFAK---KTKDEIRVLYNGTNHYDALI 205          
BLAST of Ggra6104.t1 vs. uniprot
Match: L1J6A7 (Ubiquitin thioesterase OTU1 n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6A7_GUITC)

HSP 1 Score: 146 bits (369), Expect = 1.240e-39
Identity = 73/146 (50.00%), Postives = 99/146 (67.81%), Query Frame = 0
Query:   44 TPPLRVVPVRGDGRCLYRAIAKNLASSDGRRLSENLERADADALRDIAWREICVERKKEFRAKHIIEGSHSSYCASMRNPRFYAGEPEMLALADALKRPIMVYLRTTQGQLRNIVTYGENYSKGRFSARKIIRVLYMNGNHYDALL 189
            T  L+V P++GDGRC++RAIA+ LA ++ R LS+N E  DAD LR  AW+ ICV++++ F    +IEG    YCA+M++P F+ GEPE+  LA+ L+RPI VY+   QG  + IV YG  Y+K R S    IR+LY   NHYDALL
Sbjct:  185 TTVLKVYPIKGDGRCMFRAIARALAHAEKRPLSDNYETQDADFLRKAAWQVICVDKRQAFEQARVIEGDMKQYCANMKSPNFFGGEPELFVLAEELRRPITVYV-PQQGGFKAIVQYGAKYTKERPS----IRILYNGSNHYDALL 325          
BLAST of Ggra6104.t1 vs. uniprot
Match: A0A7S0TTI5 (Ubiquitin thioesterase OTU1 n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TTI5_HEMAN)

HSP 1 Score: 140 bits (353), Expect = 6.550e-38
Identity = 68/149 (45.64%), Postives = 97/149 (65.10%), Query Frame = 0
Query:   41 ATVTPPLRVVPVRGDGRCLYRAIAKNLASSDGRRLSENLERADADALRDIAWREICVERKKEFRAKHIIEGSHSSYCASMRNPRFYAGEPEMLALADALKRPIMVYLRTTQGQLRNIVTYGENYSKGRFSARKIIRVLYMNGNHYDALL 189
            A  T  L+V P++GDGRC++R+IA+ +A ++ R +SE LE  DAD +R  AW+ ICV+++  F    +IEG    YCASM++P FY GEPE+  L++ L+RPI +Y+   QG  + +V YG  Y     + R  IR+LY   NHYDALL
Sbjct:  119 AAGTTVLKVFPIKGDGRCMFRSIARTIAHAEKRPMSEKLETEDADYMRQAAWQVICVDKRAAFEQAKVIEGDMRQYCASMKSPTFYGGEPELFVLSELLRRPIAIYV-PQQGGFKAVVEYGTKY----LNERDRIRLLYNGNNHYDALL 262          
BLAST of Ggra6104.t1 vs. uniprot
Match: M2XJI8 (Ubiquitin thioesterase OTU1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XJI8_GALSU)

HSP 1 Score: 136 bits (342), Expect = 4.670e-37
Identity = 72/144 (50.00%), Postives = 96/144 (66.67%), Query Frame = 0
Query:   47 LRVVPVRGDGRCLYRAIAKNLASSDGRRLSENLERADADALRDIAWREICVERKKEFRAKHIIEGSHSSYCASMRNPRFYAGEPEMLALADALKRPIMVYLRTTQGQLRNIVTYGENY-SKGRFSARKIIRVLYMNGNHYDALL 189
            LR V V+GDGRCL+RAIAK LA ++GR L E LE ADADALR  A + IC+E++++F    IIEG+   YC  +  P FY GEPE+  L++  + PI VYL+T  G+ + IV YG+++ +K        IR+LY   NHYDALL
Sbjct:   50 LRKVSVKGDGRCLFRAIAKCLAHNEGRALPERLEVADADALRKEAHKIICIEQREKFEKSMIIEGNLRRYCQELLKPSFYGGEPEIWVLSEVFQVPIQVYLQTENGEYKKIVEYGKSFWNKKEGGGVLPIRLLYNGVNHYDALL 193          
The following BLAST results are available for this feature:
BLAST of Ggra6104.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISZ01.630e-10477.49Ubiquitin thioesterase OTU1 n=1 Tax=Gracilariopsis... [more]
R7QTE71.510e-7063.87Ubiquitin thioesterase OTU1 n=1 Tax=Chondrus crisp... [more]
A0A5J4Z7U52.430e-4653.42Ubiquitin thioesterase OTU1 n=1 Tax=Porphyridium p... [more]
A0A7J7IMU12.570e-4659.59OTU domain-containing protein n=1 Tax=Cyanidiococc... [more]
M1VHG08.200e-4658.00OTU domain-containing protein n=2 Tax=cellular org... [more]
A0A6T9YRP39.070e-4656.12Ubiquitin thioesterase OTU1 n=1 Tax=Erythrolobus m... [more]
A0A7S3A5A52.920e-4352.82Ubiquitin thioesterase OTU1 n=2 Tax=Rhodosorus mar... [more]
L1J6A71.240e-3950.00Ubiquitin thioesterase OTU1 n=1 Tax=Guillardia the... [more]
A0A7S0TTI56.550e-3845.64Ubiquitin thioesterase OTU1 n=1 Tax=Hemiselmis and... [more]
M2XJI84.670e-3750.00Ubiquitin thioesterase OTU1 n=1 Tax=Galdieria sulp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.80coord: 34..189
e-value: 6.0E-30
score: 106.3
NoneNo IPR availablePANTHERPTHR13312:SF3OTU-LIKE CYSTEINE PROTEASE FAMILY PROTEIN, EXPRESSEDcoord: 48..188
NoneNo IPR availableTMHMMTMhelixcoord: 31..50
IPR003323OTU domainPFAMPF02338OTUcoord: 53..185
e-value: 3.8E-16
score: 59.7
IPR003323OTU domainPROSITEPS50802OTUcoord: 47..191
score: 17.576363
IPR039138Ubiquitin thioesterase OTU1/2/3PANTHERPTHR13312HIV-INDUCED PROTEIN-7-LIKE PROTEASEcoord: 48..188
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 47..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:550222..550797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6104.t1Ggra6104.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 550222..550797 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6104.t1 ID=Ggra6104.t1|Name=Ggra6104.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=192bp
MNINSHRRTPVFTPVPSAPLASTFRKTTRRLIWYATAIPFATVTPPLRVV
PVRGDGRCLYRAIAKNLASSDGRRLSENLERADADALRDIAWREICVERK
KEFRAKHIIEGSHSSYCASMRNPRFYAGEPEMLALADALKRPIMVYLRTT
QGQLRNIVTYGENYSKGRFSARKIIRVLYMNGNHYDALLPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003323OTU_dom
IPR039138OTU1_2_3
IPR038765Papain-like_cys_pep_sf