Ggra6118.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6118.t1
Unique NameGgra6118.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length272
Homology
BLAST of Ggra6118.t1 vs. uniprot
Match: A0A7S0G1Y7 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1Y7_9RHOD)

HSP 1 Score: 175 bits (444), Expect = 1.170e-50
Identity = 92/203 (45.32%), Postives = 124/203 (61.08%), Query Frame = 0
Query:   62 LHALRASPVVLCIRHDDVSV--AYEAAAAALRGGLKCIEITLTTPNATQLIRHLRTEFPSACIGAGTVLSHEQIACVHQSGACFAMSPITDASIITACNARGLLPIPGAATPTECFQAH-QHGARIVKLFPVNLYGGLNFVKAMQGPLPDIPLLPTSGIRLETLSDYLSQPNVFAIGASRQILPSDALTRKKWNVISDNAGQW 261
            L  LR + ++LC+R  DVS+   ++A  AA+ GG+K IE+T+ TP+A  ++  LR E     +G GTV+S  Q+    ++ A F MSPITD  +I  CN + +L IPGA TPTE  +A+ + GAR VK+FP N  GG  FV  +QGP PDIPLLP SG+  E+  +   Q NV AIG S+QIL  +AL    W  I   A  W
Sbjct:   35 LRRLRDAKLLLCVRRPDVSLENVHKAILAAISGGVKAIEVTMDTPHAITIVERLRKE-TGVLVGTGTVISEGQVNMCEEARAHFVMSPITDTGLIKYCNNKSMLMIPGAMTPTEVHKAYFEAGARAVKVFPFNACGGTKFVTGIQGPFPDIPLLPASGVDFESFKELAQQSNVLAIGVSKQILSLEALRNSDWGSIEREASLW 236          
BLAST of Ggra6118.t1 vs. uniprot
Match: A0A7S1TC30 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TC30_9RHOD)

HSP 1 Score: 169 bits (428), Expect = 1.100e-47
Identity = 88/192 (45.83%), Postives = 123/192 (64.06%), Query Frame = 0
Query:   59 AATLHALRASPVVLCIRHDDVSVAYEAAAAALRGGLKCIEITLTTPNATQLIRHLR--------TEFPSACIGAGTVLSHEQIACVHQSGACFAMSPITDASIITACNARGLLPIPGAATPTECFQAHQH-GARIVKLFPVNLYGGLNFVKAMQGPLPDIPLLPTSGIRLETLSDYLSQPNVFAIGASRQIL 241
            A  +  LR + VVLCIR DD   A  AA AA+RGG++ +E+T+TTP A++++RHL         +E     +G GT L+ + +     +GA FA SP+ D  I+   +A  +L +PGAATP+E   A    GA +VK++P  L GG++FV+A+ GP PDIPLLPTSGI L  L+ YL  PNV A+GAS+QI+
Sbjct:   96 AKRVQDLRDAGVVLCIRVDDEITARRAALAAIRGGIRAVEVTMTTPGASRIVRHLLRETRGDQDSEHSPVLVGVGTALTADDVNRAADAGASFAFSPVADPEIVRLAHAYEMLAVPGAATPSEIHHAFACCGAAVVKVYPAALVGGIDFVRAIYGPFPDIPLLPTSGIDLSDLTQYLEMPNVVAVGASKQIV 287          
BLAST of Ggra6118.t1 vs. uniprot
Match: A0A5J4YU67 (2-dehydro-3-deoxy-phosphogluconate aldolase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YU67_PORPP)

HSP 1 Score: 159 bits (402), Expect = 8.750e-44
Identity = 87/207 (42.03%), Postives = 128/207 (61.84%), Query Frame = 0
Query:   57 RLAATLHALRASPVVLCIRHDDVSVAYEAAAAALRGGLKCIEITLTTPNATQLIRHLRTEFPSACIGAGTVLSHEQIACVHQSGACFAMSPI-TDASIITACNARGLLPIPGAATPTECFQAHQ-HGARIVKLFPVNLYGGLNFVKAMQGPLPDIPLLPTSGIRLETLSDYLSQPNVFAIGASRQILPSDALTRKKWNVISDNAGQW 261
            R+A     LR + + +CIR D  ++AY+AA   L  G++ +EITL+ P+A  ++  LR  FP   +GAGTVL    +  + + G  + MSP+     +I    A G+L IPGAATP+E F A +  GA +VKLFP +L    + V+AM+GPL  IP++PTSGI L ++ DY+S  NV+ IGASRQI+ +  +  ++W +I   A QW
Sbjct:   58 RIARVKQELRRARLFVCIRMDSPTLAYDAAVCVLEAGVQSVEITLSVPDAHDVLNKLRRAFPDVLLGAGTVLRTRDLLPLVELGVDYVMSPVGMPREMIDFGRASGVLCIPGAATPSEAFNAVELTGAELVKLFPTSL----DVVRAMRGPLGHIPVVPTSGIALHSVRDYMSLSNVWCIGASRQIVSAHDVQHREWTLIQSRAQQW 260          
BLAST of Ggra6118.t1 vs. uniprot
Match: A0A3S4YGK6 (2-dehydro-3-deoxy-phosphogluconate aldolase n=3 Tax=Neisseria animaloris TaxID=326522 RepID=A0A3S4YGK6_9NEIS)

HSP 1 Score: 153 bits (386), Expect = 2.030e-42
Identity = 83/199 (41.71%), Postives = 113/199 (56.78%), Query Frame = 0
Query:   65 LRASPVVLCIRHDDVSVAYEAAAAALRGGLKCIEITLTTPNATQLIRHLRTEFPSACIGAGTVLSHEQIACVHQSGACFAMSPITDASIITACNARGLLPIPGAATPTECFQAHQHGARIVKLFPVNLYGGLNFVKAMQGPLPDIPLLPTSGIRLETLSDYLSQPNVFAIGASRQILPSDALTRKKWNVISDNAGQWAA 263
            L A  VV  +  DD+S A + A A + GG+  +EITL T    + IR ++ E P+A +GAGTV++ EQ+  V  +GA FA+SP  + +   A     +  IPG ATP E   A +HG   +KLFP  + GG N +KA+ GP P +   PT GI LET  DYL  PNV  +G S  + P DA+  K W  I+  A + AA
Sbjct:    7 LTAGAVVPVMAIDDISTAVDLAHALVEGGIPTLEITLRTSAGIEAIRLIKKEVPNAIVGAGTVINGEQLKAVEDAGAVFAISPGFNLNFAKAAQQSSIAVIPGIATPGELMLALEHGIDTMKLFPAEVVGGKNMLKALYGPFPQVKFCPTGGISLETAPDYLKLPNVLCVGGS-WLTPKDAVQNKDWATITRLAKEAAA 204          
BLAST of Ggra6118.t1 vs. uniprot
Match: M2VXM3 (Bifunctional 2-dehydro-3-deoxyphosphogluconate aldolase /4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXM3_GALSU)

HSP 1 Score: 150 bits (378), Expect = 3.110e-41
Identity = 76/155 (49.03%), Postives = 95/155 (61.29%), Query Frame = 0
Query:   70 VVLCIRHDDVSVAYEAAAAALRGGLKCIEITLTTPNATQLIRHLRTEFPSACIGAGTVLSHEQIACVHQSGACFAMSPITDASIITACNARGLLPIPGAATPTECFQAHQHGARIVKLFPVNLYGGLNFVKAMQGPLPDIPLLPTSGIRLETLSD 224
            VV+C+R    S A +   A + GGL  +EITLTTP+A +LI  L  E+P A IGAGTVL   Q+    +SGA F MSP+    +I       LL IPG  TP+E +     GA +VKLFPV  +GGL+ VK + GP PDIPLLPTSGI L  L +
Sbjct:   51 VVVCVRQQSFSTALKTCRALMAGGLDRLEITLTTPDAFELIHTLSNEYPQATIGAGTVLKPSQVKLAAKSGALFIMSPVLVHDVIEEAKRHDLLAIPGGTTPSEIYNCFSAGASLVKLFPVESFGGLSLVKTVAGPFPDIPLLPTSGITLNALPE 205          
BLAST of Ggra6118.t1 vs. uniprot
Match: A0A1T5IPQ0 (2-dehydro-3-deoxy-phosphogluconate aldolase n=1 Tax=Pseudoxanthomonas indica TaxID=428993 RepID=A0A1T5IPQ0_9GAMM)

HSP 1 Score: 150 bits (378), Expect = 4.530e-41
Identity = 83/209 (39.71%), Postives = 121/209 (57.89%), Query Frame = 0
Query:   55 EARLAATLHALRASPVVLCIRHDDVSVAYEAAAAALRGGLKCIEITLTTPNATQLIRHLRTEFPSACIGAGTVLSHEQIACVHQSGACFAMSPITDASIITACNARGLLPIPGAATPTECFQAHQHGARIVKLFPVNLYGGLNFVKAMQGPLPDIPLLPTSGIRLETLSDYLSQPNVFAIGASRQILPSDALTRKKWNVISDNAGQWAA 263
            +AR       LRA+ ++  +  + +  A + + A L GGL  IE+TL TP A + +  L+ E P   IGAGTVL+ EQ+     +GA F ++P T A + +A     +  +PGAA+PTE      HG R+ KLFP N  GGL  +K + GPL ++ L PT GI  +T +DYLSQPNV  IG S  + P D L + +W+ + D++ + AA
Sbjct:    4 QARTQKAESLLRAAGILPVVTVNSLDEARKVSQALLEGGLPAIELTLRTPVAMEALAMLKRELPDIVIGAGTVLTVEQMQQSIDAGADFLVTPGTTAEMASALAQADIPVVPGAASPTELLTLMAHGFRVCKLFPANAVGGLAMIKGLAGPLAELKLCPTGGIGEDTAADYLSQPNVVCIGGSWMV-PKDWLAKGEWDKVRDSSAKAAA 211          
BLAST of Ggra6118.t1 vs. uniprot
Match: A0A7Y2JTN0 (Bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7Y2JTN0_9BACT)

HSP 1 Score: 149 bits (376), Expect = 1.100e-40
Identity = 78/189 (41.27%), Postives = 115/189 (60.85%), Query Frame = 0
Query:   57 RLAATLHALRASPVVLCIRHDDVSVAYEAAAAALRGGLKCIEITLTTPNATQLIRHLRTEFPSACIGAGTVLSHEQIACVHQSGACFAMSPITDASIITACNARGLLPIPGAATPTECFQAHQHGARIVKLFPVNLYGGLNFVKAMQGPLPDIPLLPTSGIRLETLSDYLSQPNVFAIGASRQILPSDA 245
            R++ T   L    V+LCIR        +   AA RGGL+ +E+TLTTPNA  +I  L  +     +GAGTVLS + +  V ++G  F +SP+ D+++       GLL IPG  TPTE   AH+ GA +VK+FP    GG  F++A++GPLPD+PL+PTSG   ET++DY++   V A+G   ++ P ++
Sbjct:   18 RISRTRERLLHDGVILCIRMGAGDPVLDKCEAAARGGLRTLEVTLTTPNALDIIGTL-AQREEMLVGAGTVLSRQAVRSVARAGGKFVLSPVFDSAVCDEARRVGLLAIPGTGTPTEILAAHRAGASLVKVFPAGPLGGPAFLRAVRGPLPDVPLIPTSGPTSETIADYVAAGAV-AVGVGAEVFPPNS 204          
BLAST of Ggra6118.t1 vs. uniprot
Match: A0A2R6XSX8 (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XSX8_MARPO)

HSP 1 Score: 152 bits (383), Expect = 1.140e-40
Identity = 88/207 (42.51%), Postives = 122/207 (58.94%), Query Frame = 0
Query:   58 LAATLHALRASPVVLCIRHDDVSVAYEAAAAALRGGLKCIEITLTTPNATQLIRHLRTEFPSACIGAGTVLSHEQIACVHQSGACFAMSPITDASIITACNARGLLPIPGAATPTECFQAHQHGARIVKLFPVNLYGGLNFVKAMQGPLPDIPLLPTSGIRLETLSDYLSQPNVFAIGASRQILPSDALTRKKWNVISDNAGQWAAK 264
            + +TLH LR + ++ C+R     VA +AA AAL GGL  +E+T+TTP+A ++I  L  E+PSA IGAGTVLS ++     Q+GA F  SP+T   ++ A     +L IPG  TPTE   AH  GA  VKLFPV L GG+ +  A+Q  LP IPL+ +SGI L+ +  Y S   V A+  S  +    AL  + ++ I   A   A+K
Sbjct:  105 MQSTLHRLRRAGIIACLRTTSADVALDAARAALDGGLTTVEVTMTTPSAAKIIDCLVREYPSATIGAGTVLSMQEAEVAKQAGAKFLTSPVTMEDMVRAHKDGPVLFIPGTMTPTEVVTAHCLGACAVKLFPVALLGGVQYALALQRTLPHIPLIVSSGISLDMVEPYFSA-GVMAVIVSDAVFGKAALETRDYSKIKTLASAAASK 310          
BLAST of Ggra6118.t1 vs. uniprot
Match: A0A286CXH5 (2-dehydro-3-deoxy-phosphogluconate aldolase n=1 Tax=Pseudoxanthomonas wuyuanensis TaxID=1073196 RepID=A0A286CXH5_9GAMM)

HSP 1 Score: 147 bits (371), Expect = 5.040e-40
Identity = 84/209 (40.19%), Postives = 120/209 (57.42%), Query Frame = 0
Query:   55 EARLAATLHALRASPVVLCIRHDDVSVAYEAAAAALRGGLKCIEITLTTPNATQLIRHLRTEFPSACIGAGTVLSHEQIACVHQSGACFAMSPITDASIITACNARGLLPIPGAATPTECFQAHQHGARIVKLFPVNLYGGLNFVKAMQGPLPDIPLLPTSGIRLETLSDYLSQPNVFAIGASRQILPSDALTRKKWNVISDNAGQWAA 263
            EAR       LRA+ ++  +    +  A + +AA L+GGL  IE+TL TP A + +  L+ E P   IGAGTVLS +QI     +GA F ++P T A++  A  A  +  +PGAATPTE      HG R+ KLFP +  GGL  +K + GPL D+ + PT GI  +  +DYLSQPNV  IG S  + P   L    W+ +++++ + AA
Sbjct:    4 EARQQKAESLLRAAGILPVVTVHTLDEARKVSAALLKGGLPAIELTLRTPVAMEALAMLKQELPDIVIGAGTVLSTDQIEQSIAAGADFLVTPGTPAALAEALAAAPIPVVPGAATPTELLSLMAHGFRVCKLFPASAVGGLAMLKGLAGPLSDLKICPTGGITEDNAADYLSQPNVVCIGGSWMV-PKAWLDAGDWDKVTESSAKAAA 211          
BLAST of Ggra6118.t1 vs. uniprot
Match: A0A0J0YQP6 (2-dehydro-3-deoxy-phosphogluconate aldolase n=1 Tax=Neisseria arctica TaxID=1470200 RepID=A0A0J0YQP6_9NEIS)

HSP 1 Score: 146 bits (368), Expect = 1.060e-39
Identity = 78/199 (39.20%), Postives = 113/199 (56.78%), Query Frame = 0
Query:   65 LRASPVVLCIRHDDVSVAYEAAAAALRGGLKCIEITLTTPNATQLIRHLRTEFPSACIGAGTVLSHEQIACVHQSGACFAMSPITDASIITACNARGLLPIPGAATPTECFQAHQHGARIVKLFPVNLYGGLNFVKAMQGPLPDIPLLPTSGIRLETLSDYLSQPNVFAIGASRQILPSDALTRKKWNVISDNAGQWAA 263
            L A  VV  +  DD+S A + A A + GG+  +EITL TP     IR ++ E P A +GAGTV++ +Q+  V  +GA FA+SP  +   + A      + IPG ATP E   A ++G   +KLFP  + GG   +KA+ GP  D+   PT GI L+T  +YL+ PNV  +G S  + P +A+  K W+ I+  A + AA
Sbjct:    7 LSAGAVVPVMAIDDLSTAVDLAHALVEGGIPTLEITLRTPVGIDAIRLIKKEVPGAIVGAGTVVNSKQLKAVEDAGAAFAISPGLNGEFVKAAQQSSTVVIPGVATPGELMLALEYGIDTLKLFPAEVVGGTEMLKALYGPFADVRFCPTGGISLKTAPEYLALPNVLCVGGS-WLTPKEAVKNKDWDTITRLAKEAAA 204          
The following BLAST results are available for this feature:
BLAST of Ggra6118.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0G1Y71.170e-5045.32Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TC301.100e-4745.83Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A5J4YU678.750e-4442.032-dehydro-3-deoxy-phosphogluconate aldolase n=1 Ta... [more]
A0A3S4YGK62.030e-4241.712-dehydro-3-deoxy-phosphogluconate aldolase n=3 Ta... [more]
M2VXM33.110e-4149.03Bifunctional 2-dehydro-3-deoxyphosphogluconate ald... [more]
A0A1T5IPQ04.530e-4139.712-dehydro-3-deoxy-phosphogluconate aldolase n=1 Ta... [more]
A0A7Y2JTN01.100e-4041.27Bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-d... [more]
A0A2R6XSX81.140e-4042.51Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A286CXH55.040e-4040.192-dehydro-3-deoxy-phosphogluconate aldolase n=1 Ta... [more]
A0A0J0YQP61.060e-3939.202-dehydro-3-deoxy-phosphogluconate aldolase n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000887KDPG/KHG aldolasePFAMPF01081Aldolasecoord: 64..254
e-value: 3.4E-43
score: 147.3
IPR000887KDPG/KHG aldolaseTIGRFAMTIGR01182TIGR01182coord: 63..259
e-value: 1.1E-58
score: 195.8
IPR000887KDPG/KHG aldolasePANTHERPTHR302462-KETO-3-DEOXY-6-PHOSPHOGLUCONATE ALDOLASEcoord: 38..269
IPR000887KDPG/KHG aldolaseCDDcd00452KDPG_aldolasecoord: 65..257
e-value: 4.04238E-62
score: 192.348
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 45..266
e-value: 5.2E-68
score: 230.4
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 61..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:596605..597420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6118.t1Ggra6118.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 596605..597420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6118.t1 ID=Ggra6118.t1|Name=Ggra6118.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=272bp
MQSRAPTFVTAPIPIASRERLSPRVHRVTRASPLYKTRIPSSMTRHQSPL
TIANEARLAATLHALRASPVVLCIRHDDVSVAYEAAAAALRGGLKCIEIT
LTTPNATQLIRHLRTEFPSACIGAGTVLSHEQIACVHQSGACFAMSPITD
ASIITACNARGLLPIPGAATPTECFQAHQHGARIVKLFPVNLYGGLNFVK
AMQGPLPDIPLLPTSGIRLETLSDYLSQPNVFAIGASRQILPSDALTRKK
WNVISDNAGQWAAKAAQFAQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000887Aldlse_KDPG_KHG
IPR013785Aldolase_TIM