Ggra6168.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6168.t1
Unique NameGgra6168.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length390
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:804382..805551 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6168Ggra6168Gracilaria gracilis GNS1m malegenetig00000045_pilon 804382..805551 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6168.t1.start1Ggra6168.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000045_pilon 804382..804384 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6168.t1.CDS1Ggra6168.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000045_pilon 804382..805551 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6168.t1.exon1Ggra6168.t1.exon1Gracilaria gracilis GNS1m maleexontig00000045_pilon 804382..805551 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6168.t1.stop1Ggra6168.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000045_pilon 805549..805551 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6168.t1Ggra6168.t1Gracilaria gracilis GNS1m malepolypeptidetig00000045_pilon 804382..805551 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6168.t1 ID=Ggra6168.t1|Name=Ggra6168.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=390bp
MLLDKQESEDVTKQREENKEREGELRRQQARKQQKQRELKAQHQREREQR
QSAVEADISAPHCTDQRHGAESMTSEELRRTWWTERGDGDDADSGDDVHD
DVENEHSDAQIDDIEEFCAANYIHSIPAEFVSSALGSGSVACNPDGDSGE
CDAAVGDTSAIASPHGEFHGDQNISPGPKSGDRSEIRKRQKKASKKRAME
RAKAVLEAELDGSKSWRPKRCVEIKPQVGMSLNFRWQCEQLIRAYTAYIG
VQKGITVAQTLERVTTKCRQANCNAKLTFNWQPRSGLWKLNQFVEHRNEC
CGQDVGSNGDRSCQPKFCAPAYTPRQVARAILDEAVGDPNISSKTIASLV
EAKQIYKRQPPQSHYRSVRKEILNQMRACRAVDMAALEG*
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spliced messenger RNA

>Ggra6168.t1 ID=Ggra6168.t1|Name=Ggra6168.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1170bp|location=Sequence derived from alignment at tig00000045_pilon:804382..805551+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGTTGGACAAGCAAGAATCGGAGGATGTAACAAAGCAACGAGAGGA
AAACAAGGAGAGAGAGGGAGAGTTGAGACGGCAACAAGCAAGAAAGCAAC
AGAAGCAGCGTGAGTTGAAAGCACAGCACCAACGAGAGAGAGAGCAGCGA
CAAAGCGCAGTTGAGGCAGATATTTCAGCCCCTCATTGTACAGACCAGAG
GCATGGAGCTGAGAGTATGACGTCTGAGGAACTTCGTAGAACGTGGTGGA
CAGAGAGAGGtgatggtgatgacgctgattctggtgatgatgtccatgat
gatgTAGAAAATGAACATTCGGACGCTCAAATAGATGATATTGAGGAGTT
CTGTGCCGCAAACTACATCCATTCGATTCCAGCTGAGTTTGTCAGTTCCG
CTCTCGGTTCAGGTTCTGTGGCCTGCAACCCAGATGGTGACAGTGGAGAA
TGTGATGCAGCCGTGGGTGACACTAGTGCCATTGCTTCTCCCCACGGTGA
ATTTCATGGTGACCAAAATATCTCACCTGGACCGAAGTCAGGAGACAGGA
GTGAGATAAGGAAACGTCAGAAGAAAGCATCAAAGAAAAGAGCCATGGAA
CGAGCTAAGGCTGTGCTTGAGGCAGAGTTGGACGGTTCAAAATCATGGAG
ACCTAAGAGATGTGTCGAAATCAAGCCACAGGTAGGAATGTCGTTGAACT
TTCGATGGCAGTGCGAGCAACTGATTAGAGCCTACACAGCGTACATAGGT
GTTCAGAAAGGGATAACGGTTGCTCAGACCTTGGAGCGTGTTACAACGAA
ATGCCGCCAGGCGAATTGTAACGCTAAACTTACGTTCAATTGGCAACCTC
GCAGCGGTCTGTGGAAACTAAACCAGTTCGTGGAACACCGTAATGAGTGC
TGCGGACAAGATGTTGGAAGCAATGGAGATCGTTCTTGCCAGCCGAAGTT
TTGCGCACCAGCATATACTCCGCGACAGGTAGCTCGAGCAATACTGGACG
AGGCTGTGGGGGACCCCAATATTTCGTCAAAGACAATTGCATCTCTCGTG
GAAGCGAAGCAAATCTACAAGCGCCAACCACCCCAAAGCCATTACCGATC
CGTTCGGAAAGAAATATTGAACCAAATGCGAGCCTGTCGTGCAGTGGATA
TGGCGGCACTAGAGGGATAG
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protein sequence of Ggra6168.t1

>Ggra6168.t1 ID=Ggra6168.t1|Name=Ggra6168.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=390bp
MLLDKQESEDVTKQREENKEREGELRRQQARKQQKQRELKAQHQREREQR
QSAVEADISAPHCTDQRHGAESMTSEELRRTWWTERGDGDDADSGDDVHD
DVENEHSDAQIDDIEEFCAANYIHSIPAEFVSSALGSGSVACNPDGDSGE
CDAAVGDTSAIASPHGEFHGDQNISPGPKSGDRSEIRKRQKKASKKRAME
RAKAVLEAELDGSKSWRPKRCVEIKPQVGMSLNFRWQCEQLIRAYTAYIG
VQKGITVAQTLERVTTKCRQANCNAKLTFNWQPRSGLWKLNQFVEHRNEC
CGQDVGSNGDRSCQPKFCAPAYTPRQVARAILDEAVGDPNISSKTIASLV
EAKQIYKRQPPQSHYRSVRKEILNQMRACRAVDMAALEG*
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mRNA from alignment at tig00000045_pilon:804382..805551+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6168.t1 ID=Ggra6168.t1|Name=Ggra6168.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1170bp|location=Sequence derived from alignment at tig00000045_pilon:804382..805551+ (Gracilaria gracilis GNS1m male)
ATGCTGTTGGACAAGCAAGAATCGGAGGATGTAACAAAGCAACGAGAGGA
AAACAAGGAGAGAGAGGGAGAGTTGAGACGGCAACAAGCAAGAAAGCAAC
AGAAGCAGCGTGAGTTGAAAGCACAGCACCAACGAGAGAGAGAGCAGCGA
CAAAGCGCAGTTGAGGCAGATATTTCAGCCCCTCATTGTACAGACCAGAG
GCATGGAGCTGAGAGTATGACGTCTGAGGAACTTCGTAGAACGTGGTGGA
CAGAGAGAGGtgatggtgatgacgctgattctggtgatgatgtccatgat
gatgTAGAAAATGAACATTCGGACGCTCAAATAGATGATATTGAGGAGTT
CTGTGCCGCAAACTACATCCATTCGATTCCAGCTGAGTTTGTCAGTTCCG
CTCTCGGTTCAGGTTCTGTGGCCTGCAACCCAGATGGTGACAGTGGAGAA
TGTGATGCAGCCGTGGGTGACACTAGTGCCATTGCTTCTCCCCACGGTGA
ATTTCATGGTGACCAAAATATCTCACCTGGACCGAAGTCAGGAGACAGGA
GTGAGATAAGGAAACGTCAGAAGAAAGCATCAAAGAAAAGAGCCATGGAA
CGAGCTAAGGCTGTGCTTGAGGCAGAGTTGGACGGTTCAAAATCATGGAG
ACCTAAGAGATGTGTCGAAATCAAGCCACAGGTAGGAATGTCGTTGAACT
TTCGATGGCAGTGCGAGCAACTGATTAGAGCCTACACAGCGTACATAGGT
GTTCAGAAAGGGATAACGGTTGCTCAGACCTTGGAGCGTGTTACAACGAA
ATGCCGCCAGGCGAATTGTAACGCTAAACTTACGTTCAATTGGCAACCTC
GCAGCGGTCTGTGGAAACTAAACCAGTTCGTGGAACACCGTAATGAGTGC
TGCGGACAAGATGTTGGAAGCAATGGAGATCGTTCTTGCCAGCCGAAGTT
TTGCGCACCAGCATATACTCCGCGACAGGTAGCTCGAGCAATACTGGACG
AGGCTGTGGGGGACCCCAATATTTCGTCAAAGACAATTGCATCTCTCGTG
GAAGCGAAGCAAATCTACAAGCGCCAACCACCCCAAAGCCATTACCGATC
CGTTCGGAAAGAAATATTGAACCAAATGCGAGCCTGTCGTGCAGTGGATA
TGGCGGCACTAGAGGGATAG
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Coding sequence (CDS) from alignment at tig00000045_pilon:804382..805551+

>Ggra6168.t1 ID=Ggra6168.t1|Name=Ggra6168.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1170bp|location=Sequence derived from alignment at tig00000045_pilon:804382..805551+ (Gracilaria gracilis GNS1m male)
ATGCTGTTGGACAAGCAAGAATCGGAGGATGTAACAAAGCAACGAGAGGA
AAACAAGGAGAGAGAGGGAGAGTTGAGACGGCAACAAGCAAGAAAGCAAC
AGAAGCAGCGTGAGTTGAAAGCACAGCACCAACGAGAGAGAGAGCAGCGA
CAAAGCGCAGTTGAGGCAGATATTTCAGCCCCTCATTGTACAGACCAGAG
GCATGGAGCTGAGAGTATGACGTCTGAGGAACTTCGTAGAACGTGGTGGA
CAGAGAGAGGtgatggtgatgacgctgattctggtgatgatgtccatgat
gatgTAGAAAATGAACATTCGGACGCTCAAATAGATGATATTGAGGAGTT
CTGTGCCGCAAACTACATCCATTCGATTCCAGCTGAGTTTGTCAGTTCCG
CTCTCGGTTCAGGTTCTGTGGCCTGCAACCCAGATGGTGACAGTGGAGAA
TGTGATGCAGCCGTGGGTGACACTAGTGCCATTGCTTCTCCCCACGGTGA
ATTTCATGGTGACCAAAATATCTCACCTGGACCGAAGTCAGGAGACAGGA
GTGAGATAAGGAAACGTCAGAAGAAAGCATCAAAGAAAAGAGCCATGGAA
CGAGCTAAGGCTGTGCTTGAGGCAGAGTTGGACGGTTCAAAATCATGGAG
ACCTAAGAGATGTGTCGAAATCAAGCCACAGGTAGGAATGTCGTTGAACT
TTCGATGGCAGTGCGAGCAACTGATTAGAGCCTACACAGCGTACATAGGT
GTTCAGAAAGGGATAACGGTTGCTCAGACCTTGGAGCGTGTTACAACGAA
ATGCCGCCAGGCGAATTGTAACGCTAAACTTACGTTCAATTGGCAACCTC
GCAGCGGTCTGTGGAAACTAAACCAGTTCGTGGAACACCGTAATGAGTGC
TGCGGACAAGATGTTGGAAGCAATGGAGATCGTTCTTGCCAGCCGAAGTT
TTGCGCACCAGCATATACTCCGCGACAGGTAGCTCGAGCAATACTGGACG
AGGCTGTGGGGGACCCCAATATTTCGTCAAAGACAATTGCATCTCTCGTG
GAAGCGAAGCAAATCTACAAGCGCCAACCACCCCAAAGCCATTACCGATC
CGTTCGGAAAGAAATATTGAACCAAATGCGAGCCTGTCGTGCAGTGGATA
TGGCGGCACTAGAGGGATAG
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