Ggra8425.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8425.t1
Unique NameGgra8425.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length152
Homology
BLAST of Ggra8425.t1 vs. uniprot
Match: A0A2V3IFH5 (Cupin_2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFH5_9FLOR)

HSP 1 Score: 224 bits (572), Expect = 2.780e-73
Identity = 105/144 (72.92%), Postives = 126/144 (87.50%), Query Frame = 0
Query:    7 MRQPVAIVTFFMGLVMGLYISRVLSASPRGFDHTDSPFHISTVPFSGVSHNPEIQKRVLARYFQMPHVTQVAKAYIQPGQIASENWHDDMVEMFLFVAGHGVLNLDGTNYTVSDGSVALVFPPTKHTIFNTASEPLELFTIASV 150
            M+ P+ IVT   GL++G Y++R++ A+P  F+HT +P H+S VPF+ VSHNPEI+K+VLARYFQ+PHVTQVAKAY+ PGQ+ASENWH DMVEMFLFVAG GVL+LDG NY+VSDGSVALVFPPTKHTIFNTA +PLELFTIASV
Sbjct:    1 MKFPLPIVTLLAGLMIGFYVNRLIVAAPTAFEHTAAPIHLSKVPFTSVSHNPEIKKQVLARYFQLPHVTQVAKAYLDPGQVASENWHQDMVEMFLFVAGDGVLSLDGKNYSVSDGSVALVFPPTKHTIFNTADKPLELFTIASV 144          
BLAST of Ggra8425.t1 vs. uniprot
Match: cupin domain-containing protein n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F47046D (cupin domain-containing protein n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F47046D)

HSP 1 Score: 85.9 bits (211), Expect = 6.340e-19
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 0
Query:   46 ISTVPFSGVSHNPEIQKRVLARYFQMPHVTQVAKAYIQPGQIASENWHDDMVEMFLFVAGHGVLNLDGTNYTVSDGSVALVFPPTKHTIFNTASEPLEL 144
            +S +P   VSHNPEIQK+V+ R   +PH+T  ++A + PGQIAS + H DM E+F  ++G GV+ LD T Y ++ G    V P   H + NT  E L L
Sbjct:    6 LSDLPAEFVSHNPEIQKKVMLRPGDLPHLTNFSQARLAPGQIASAHHHVDMYEVFFVMSGVGVITLDRTPYALTPGVCVAVEPGETHEVKNTGDEELVL 104          
BLAST of Ggra8425.t1 vs. uniprot
Match: A0A533QED0 (Cupin type-1 domain-containing protein n=3 Tax=Candidatus Jettenia TaxID=360731 RepID=A0A533QED0_9BACT)

HSP 1 Score: 88.6 bits (218), Expect = 1.770e-18
Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 0
Query:   46 ISTVPFSGVSHNPEIQKRVLARYFQMPHVTQVAKAYIQPGQIASENWHDDMVEMFLFVAGHGVLNLDGTNYTVSDGSVALVFPPTKHTIFNTASEPLEL 144
            +S +P  GVSHNPEI+K+VL +  ++P+VT  ++A I PGQIA  + HDD  E+F F  G G++ +D   Y V  G    + P   HTI NTAS  L L
Sbjct:    6 LSDLPEEGVSHNPEIKKKVLLKKDEIPNVTGFSQARITPGQIADPHAHDDRYEIFFFEEGKGIVRIDDKEYPVEKGICITIEPGEVHTIINTASSDLVL 104          
BLAST of Ggra8425.t1 vs. uniprot
Match: K8GJ60 (Cupin domain-containing protein n=1 Tax=Leptolyngbyaceae cyanobacterium JSC-12 TaxID=864702 RepID=K8GJ60_9CYAN)

HSP 1 Score: 82.4 bits (202), Expect = 1.430e-17
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 0
Query:   54 VSHNPEIQKRVLARYFQMPHVTQVAKAYIQPGQIASENWHDDMVEMFLFVAGHGVLNLDGTNYTVSDGSVALVFPPTKHTIFNTASEPLEL 144
            VSHNP IQK+V+ R   +PH+T  ++A++ PGQIA+ + H DM E+F   AG G++ +D T Y +  G    V P  +H + NT +E L L
Sbjct:   14 VSHNPAIQKKVMLRSGDLPHLTNFSQAWLAPGQIAAGHQHTDMYEVFFVEAGEGIIKIDETMYQLHPGVCVAVEPGERHEVSNTGTEELVL 104          
BLAST of Ggra8425.t1 vs. uniprot
Match: A0A367QYE5 (Cupin n=2 Tax=Nostocaceae TaxID=1162 RepID=A0A367QYE5_9NOSO)

HSP 1 Score: 80.1 bits (196), Expect = 1.200e-16
Identity = 37/99 (37.37%), Postives = 58/99 (58.59%), Query Frame = 0
Query:   46 ISTVPFSGVSHNPEIQKRVLARYFQMPHVTQVAKAYIQPGQIASENWHDDMVEMFLFVAGHGVLNLDGTNYTVSDGSVALVFPPTKHTIFNTASEPLEL 144
            ++ +P   VSHNPEI+K+V+ R+  +PH+T  ++A   PGQ AS + H DM E+F   AG G++ +D   Y +  G+   + P   H + N+ S  L L
Sbjct:    6 LNDLPEDSVSHNPEIKKKVMLRFGDLPHLTNFSQARFAPGQTASAHAHHDMCEVFFVQAGEGLIRIDSQEYPLLPGNCVAIEPGEVHEVINSGSTELVL 104          
BLAST of Ggra8425.t1 vs. uniprot
Match: A0A1Z4S8G0 (Cupin 2 domain-containing protein n=2 Tax=Nostocaceae TaxID=1162 RepID=A0A1Z4S8G0_9NOSO)

HSP 1 Score: 80.1 bits (196), Expect = 1.200e-16
Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = 0
Query:   46 ISTVPFSGVSHNPEIQKRVLARYFQMPHVTQVAKAYIQPGQIASENWHDDMVEMFLFVAGHGVLNLDGTNYTVSDGSVALVFPPTKHTIFNTASEPLEL 144
            ++ +P   VSHNPEI K+V+ R+  +PH+T  ++A   PGQ AS + H DM E+F   AG GV+ +D   Y +  G+   + P   H I N+ S  L L
Sbjct:    6 LNDLPEESVSHNPEITKKVMLRFGDLPHLTNFSQARFSPGQTASAHAHQDMCEVFFVQAGAGVIRVDSKEYPLLPGNCIAIEPGEVHEIINSGSAELVL 104          
BLAST of Ggra8425.t1 vs. uniprot
Match: cupin domain-containing protein n=1 Tax=Nostoc sp. PA-18-2419 TaxID=2575443 RepID=UPI001108F955 (cupin domain-containing protein n=1 Tax=Nostoc sp. PA-18-2419 TaxID=2575443 RepID=UPI001108F955)

HSP 1 Score: 80.1 bits (196), Expect = 1.260e-16
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 0
Query:   46 ISTVPFSGVSHNPEIQKRVLARYFQMPHVTQVAKAYIQPGQIASENWHDDMVEMFLFVAGHGVLNLDGTNYTVSDGSVALVFPPTKHTIFNTASEPLEL 144
            ++ +P   VSHNPEI+K+V+ RY  +PH+T  ++A   PGQ A  + H DM E+F   AG GV+ +DG  Y +  G+   +     H I NT S  L L
Sbjct:    6 LNNLPEEAVSHNPEIKKKVMLRYGDLPHLTNFSQARFAPGQTAPPHAHQDMCEVFFVEAGSGVIRIDGKEYPLLRGNCIAIELGEIHEIVNTGSTELVL 104          
BLAST of Ggra8425.t1 vs. uniprot
Match: A0A252DYP0 (Cupin n=4 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A252DYP0_9NOSO)

HSP 1 Score: 79.7 bits (195), Expect = 1.790e-16
Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 0
Query:   46 ISTVPFSGVSHNPEIQKRVLARYFQMPHVTQVAKAYIQPGQIASENWHDDMVEMFLFVAGHGVLNLDGTNYTVSDGSVALVFPPTKHTIFNTASEPLEL 144
            ++ +P   VSHNPEI+K+V+ R+  +PH+T  ++A   PGQ A  + H DM E+F   AG GV+++DG  Y +  G+   V P   H + N+ +  L L
Sbjct:    6 LNDLPEESVSHNPEIKKKVMLRFGDLPHLTNFSQARFAPGQSAPAHAHQDMAEVFFVEAGLGVIHIDGKEYPLLPGNCVAVEPGEIHEVVNSGTTELVL 104          
BLAST of Ggra8425.t1 vs. uniprot
Match: B2IYD9 (Cupin 2, conserved barrel domain protein n=27 Tax=Nostocaceae TaxID=1162 RepID=B2IYD9_NOSP7)

HSP 1 Score: 79.7 bits (195), Expect = 1.790e-16
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 0
Query:   46 ISTVPFSGVSHNPEIQKRVLARYFQMPHVTQVAKAYIQPGQIASENWHDDMVEMFLFVAGHGVLNLDGTNYTVSDGSVALVFPPTKHTIFNTASEPLEL 144
            +  +P   VSHNPEI+K+V+ R+  +PH+T  ++A   PGQ A  + H DM E+F   AG GV+++DGT Y +  G+   +     H + N+ S  L L
Sbjct:    6 LKDLPEESVSHNPEIKKKVMLRFGDLPHLTNFSQARFAPGQTAPGHAHQDMCEVFFVEAGSGVIHIDGTEYPLLPGNCVAIEVGEVHEVVNSGSTELVL 104          
BLAST of Ggra8425.t1 vs. uniprot
Match: cupin domain-containing protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI001746D595 (cupin domain-containing protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI001746D595)

HSP 1 Score: 79.7 bits (195), Expect = 1.880e-16
Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 0
Query:   49 VPFSGVSHNPEIQKRVLARYFQMPHVTQVAKAYIQPGQIASENWHDDMVEMFLFVAGHGVLNLDGTNYTVSDGSVALVFPPTKHTIFNTASEPLEL 144
            +P   VSHNP IQK+V+ R   +PH+T  ++A   PGQIA+ + H DM E+F   +G G++ +DG  Y +  G    V P   H + N +SE L L
Sbjct:    9 LPAEKVSHNPAIQKKVMLRLGDLPHLTNFSQARFAPGQIAAAHAHQDMCEVFFVESGSGIIQIDGQVYALETGICVAVEPGEVHEVSNPSSEELVL 104          
The following BLAST results are available for this feature:
BLAST of Ggra8425.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFH52.780e-7372.92Cupin_2 domain-containing protein n=1 Tax=Gracilar... [more]
cupin domain-containing protein n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F47046D6.340e-1944.44cupin domain-containing protein n=1 Tax=Leptodesmi... [more]
A0A533QED01.770e-1845.45Cupin type-1 domain-containing protein n=3 Tax=Can... [more]
K8GJ601.430e-1742.86Cupin domain-containing protein n=1 Tax=Leptolyngb... [more]
A0A367QYE51.200e-1637.37Cupin n=2 Tax=Nostocaceae TaxID=1162 RepID=A0A367Q... [more]
A0A1Z4S8G01.200e-1639.39Cupin 2 domain-containing protein n=2 Tax=Nostocac... [more]
cupin domain-containing protein n=1 Tax=Nostoc sp. PA-18-2419 TaxID=2575443 RepID=UPI001108F9551.260e-1640.40cupin domain-containing protein n=1 Tax=Nostoc sp.... [more]
A0A252DYP01.790e-1638.38Cupin n=4 Tax=unclassified Nostoc TaxID=2593658 Re... [more]
B2IYD91.790e-1638.38Cupin 2, conserved barrel domain protein n=27 Tax=... [more]
cupin domain-containing protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI001746D5951.880e-1640.63cupin domain-containing protein n=1 Tax=Phormidium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 50..151
e-value: 1.2E-14
score: 55.6
IPR013096Cupin 2, conserved barrelPFAMPF07883Cupin_2coord: 82..147
e-value: 1.8E-10
score: 40.4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..151
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 73..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:595849..596390 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8425.t1Ggra8425.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 595849..596390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8425.t1 ID=Ggra8425.t1|Name=Ggra8425.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=152bp
MRETSIMRQPVAIVTFFMGLVMGLYISRVLSASPRGFDHTDSPFHISTVP
FSGVSHNPEIQKRVLARYFQMPHVTQVAKAYIQPGQIASENWHDDMVEMF
LFVAGHGVLNLDGTNYTVSDGSVALVFPPTKHTIFNTASEPLELFTIASV
P*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR013096Cupin_2
IPR011051RmlC_Cupin_sf