Ggra366.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra366.t1
Unique NameGgra366.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length154
Homology
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BLAST of Ggra366.t1 vs. uniprot
Match: A0A2V3IKC2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKC2_9FLOR)

HSP 1 Score: 179 bits (455), Expect = 2.520e-55
Identity = 84/148 (56.76%), Postives = 110/148 (74.32%), Query Frame = 0 
Query:    1 MTDAHLKTTLKSVVGRSLADQPGDLCMRTKCQDIIPRLLSGLCKDAAHGKRARAQCKPLLQQCQHDQRARSECALKCARYYAPEQQQQQHTRCVRDCNVARCRVYEPYDVCVAQQTLLHVLQCMDGGEGRRIAQQCLKHRCGLHSSDA 148
            M D  LK ++K  VG +LAD+PG LCM+T+CQDI+PR+L+ +CK+AA GK+ARA CKPLLQ CQ D  ARS C+ +CARY+  E Q     +C+ DCN+ARCR++ PYD CVA+ TLLHVLQC+  G  R+ AQQCLK RC L  +++
Sbjct:    1 MDDQQLKHSVKRAVGNALADEPGHLCMQTRCQDIVPRILATVCKEAARGKQARALCKPLLQSCQSDPTARSNCSKRCARYF--EAQPLNLKQCISDCNLARCRLHPPYDTCVARHTLLHVLQCVQNGPARQTAQQCLKTRCSLQVNES 146
The following BLAST results are available for this feature:
BLAST of Ggra366.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKC22.520e-5556.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000950_piloncontigtig00000950_pilon:171292..171852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra366.t1Ggra366.t1Gracilaria gracilis GNS1m malemRNAtig00000950_pilon 171292..171852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra366.t1 ID=Ggra366.t1|Name=Ggra366.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=154bp
MTDAHLKTTLKSVVGRSLADQPGDLCMRTKCQDIIPRLLSGLCKDAAHGK
RARAQCKPLLQQCQHDQRARSECALKCARYYAPEQQQQQHTRCVRDCNVA
RCRVYEPYDVCVAQQTLLHVLQCMDGGEGRRIAQQCLKHRCGLHSSDAPL
APE*
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