Ggra4633.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4633.t1
Unique NameGgra4633.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length262
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000941_piloncontigtig00000941_pilon:189603..190388 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4633Ggra4633Gracilaria gracilis GNS1m malegenetig00000941_pilon 189603..190388 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4633.t1.start1Ggra4633.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000941_pilon 189603..189605 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4633.t1.CDS1Ggra4633.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000941_pilon 189603..190388 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4633.t1.exon1Ggra4633.t1.exon1Gracilaria gracilis GNS1m maleexontig00000941_pilon 189603..190388 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4633.t1.stop1Ggra4633.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000941_pilon 190386..190388 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4633.t1Ggra4633.t1Gracilaria gracilis GNS1m malepolypeptidetig00000941_pilon 189603..190388 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4633.t1 ID=Ggra4633.t1|Name=Ggra4633.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=262bp
MAKRRFSRATRAADKVLNKPTISPISKGTQPTLHRGRKKRLQTKQRIQEK
NQFIQAELERIEQDKSVKQKQKQDPILKGLNDLSGVLELGDDSAAEQGLL
RKNEKSKGKLSSKQRLKIIQVEKDQVKRVQTHEAYVNNPMEALRRHLNNT
VSPNGFEIPKSDTVLTKKNKQNKQHGKDEKEAKNSTTKIANHKSLMMSEA
TLKKATEDARQRVESKRQYKQVLSEVARRRSAKQQASKIRKQTAISLLSK
SRIGVKRAKLS*
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spliced messenger RNA

>Ggra4633.t1 ID=Ggra4633.t1|Name=Ggra4633.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=786bp|location=Sequence derived from alignment at tig00000941_pilon:189603..190388+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAAAACGTCGCTTCTCAAGAGCTACAAGGGCGGCAGACAAGGTGTT
GAACAAACCAACCATATCACCTATATCAAAAGGCACGCAACCCACCCTGC
ACCGTGGCCGTAAGAAGAGGCTGCAGACGAAGCAACGTATCCAGGAGAAG
AACCAGTTCATTCAAGCGGAGTTGGAGCGAATCGAGCAAGACAAGAGCGT
GAAACAAAAACAGAAACAAGATCCCATATTGAAGGGTCTGAATGATTTAT
CTGGAGTACTCGAGTTGGGTGATGACAGTGCAGCGGAACAGGGGCTGCTG
AGAAAGAATGAAAAGAGCAAGGGAAAGTTGTCGTCGAAGCAGAGGCTGAA
GATAATCCAGGTTGAGAAGGATCAGGTCAAGCGGGTGCAGACGCACGAAG
CGTACGTGAACAACCCGATGGAGGCGCTAAGACGACATCTAAACAACACC
GTGAGCCCCAATGGTTTTGAAATACCGAAAAGCGACACGGTTTTAACAAA
GAAGAACAAACAAAACAAACAACATGGCAAGGACGAGAAGGAAGCCAAGA
ACAGTACCACGAAAATCGCAAACCACAAATCGCTGATGATGAGCGAAGCC
ACGTTGAAGAAAGCAACAGAAGACGCAAGACAAAGAGTCGAGAGTAAGCG
GCAATACAAGCAAGTGCTTTCCGAAGTAGCCAGACGAAGGTCAGCGAAAC
AGCAAGCCTCAAAAATCCGCAAGCAAACAGCAATCTCCTTGCTCTCAAAA
TCACGTATCGGTGTAAAACGGGCAAAGCTCAGCTAG
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protein sequence of Ggra4633.t1

>Ggra4633.t1 ID=Ggra4633.t1|Name=Ggra4633.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=262bp
MAKRRFSRATRAADKVLNKPTISPISKGTQPTLHRGRKKRLQTKQRIQEK
NQFIQAELERIEQDKSVKQKQKQDPILKGLNDLSGVLELGDDSAAEQGLL
RKNEKSKGKLSSKQRLKIIQVEKDQVKRVQTHEAYVNNPMEALRRHLNNT
VSPNGFEIPKSDTVLTKKNKQNKQHGKDEKEAKNSTTKIANHKSLMMSEA
TLKKATEDARQRVESKRQYKQVLSEVARRRSAKQQASKIRKQTAISLLSK
SRIGVKRAKLS*
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mRNA from alignment at tig00000941_pilon:189603..190388+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4633.t1 ID=Ggra4633.t1|Name=Ggra4633.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=786bp|location=Sequence derived from alignment at tig00000941_pilon:189603..190388+ (Gracilaria gracilis GNS1m male)
ATGGCAAAACGTCGCTTCTCAAGAGCTACAAGGGCGGCAGACAAGGTGTT
GAACAAACCAACCATATCACCTATATCAAAAGGCACGCAACCCACCCTGC
ACCGTGGCCGTAAGAAGAGGCTGCAGACGAAGCAACGTATCCAGGAGAAG
AACCAGTTCATTCAAGCGGAGTTGGAGCGAATCGAGCAAGACAAGAGCGT
GAAACAAAAACAGAAACAAGATCCCATATTGAAGGGTCTGAATGATTTAT
CTGGAGTACTCGAGTTGGGTGATGACAGTGCAGCGGAACAGGGGCTGCTG
AGAAAGAATGAAAAGAGCAAGGGAAAGTTGTCGTCGAAGCAGAGGCTGAA
GATAATCCAGGTTGAGAAGGATCAGGTCAAGCGGGTGCAGACGCACGAAG
CGTACGTGAACAACCCGATGGAGGCGCTAAGACGACATCTAAACAACACC
GTGAGCCCCAATGGTTTTGAAATACCGAAAAGCGACACGGTTTTAACAAA
GAAGAACAAACAAAACAAACAACATGGCAAGGACGAGAAGGAAGCCAAGA
ACAGTACCACGAAAATCGCAAACCACAAATCGCTGATGATGAGCGAAGCC
ACGTTGAAGAAAGCAACAGAAGACGCAAGACAAAGAGTCGAGAGTAAGCG
GCAATACAAGCAAGTGCTTTCCGAAGTAGCCAGACGAAGGTCAGCGAAAC
AGCAAGCCTCAAAAATCCGCAAGCAAACAGCAATCTCCTTGCTCTCAAAA
TCACGTATCGGTGTAAAACGGGCAAAGCTCAGCTAG
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Coding sequence (CDS) from alignment at tig00000941_pilon:189603..190388+

>Ggra4633.t1 ID=Ggra4633.t1|Name=Ggra4633.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=786bp|location=Sequence derived from alignment at tig00000941_pilon:189603..190388+ (Gracilaria gracilis GNS1m male)
ATGGCAAAACGTCGCTTCTCAAGAGCTACAAGGGCGGCAGACAAGGTGTT
GAACAAACCAACCATATCACCTATATCAAAAGGCACGCAACCCACCCTGC
ACCGTGGCCGTAAGAAGAGGCTGCAGACGAAGCAACGTATCCAGGAGAAG
AACCAGTTCATTCAAGCGGAGTTGGAGCGAATCGAGCAAGACAAGAGCGT
GAAACAAAAACAGAAACAAGATCCCATATTGAAGGGTCTGAATGATTTAT
CTGGAGTACTCGAGTTGGGTGATGACAGTGCAGCGGAACAGGGGCTGCTG
AGAAAGAATGAAAAGAGCAAGGGAAAGTTGTCGTCGAAGCAGAGGCTGAA
GATAATCCAGGTTGAGAAGGATCAGGTCAAGCGGGTGCAGACGCACGAAG
CGTACGTGAACAACCCGATGGAGGCGCTAAGACGACATCTAAACAACACC
GTGAGCCCCAATGGTTTTGAAATACCGAAAAGCGACACGGTTTTAACAAA
GAAGAACAAACAAAACAAACAACATGGCAAGGACGAGAAGGAAGCCAAGA
ACAGTACCACGAAAATCGCAAACCACAAATCGCTGATGATGAGCGAAGCC
ACGTTGAAGAAAGCAACAGAAGACGCAAGACAAAGAGTCGAGAGTAAGCG
GCAATACAAGCAAGTGCTTTCCGAAGTAGCCAGACGAAGGTCAGCGAAAC
AGCAAGCCTCAAAAATCCGCAAGCAAACAGCAATCTCCTTGCTCTCAAAA
TCACGTATCGGTGTAAAACGGGCAAAGCTCAGCTAG
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