Ggra4598.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4598.t1
Unique NameGgra4598.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length216
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000941_piloncontigtig00000941_pilon:77396..78043 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4598Ggra4598Gracilaria gracilis GNS1m malegenetig00000941_pilon 77396..78043 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4598.t1.start1Ggra4598.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000941_pilon 77396..77398 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4598.t1.CDS1Ggra4598.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000941_pilon 77396..78043 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4598.t1.exon1Ggra4598.t1.exon1Gracilaria gracilis GNS1m maleexontig00000941_pilon 77396..78043 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4598.t1.stop1Ggra4598.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000941_pilon 78041..78043 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4598.t1Ggra4598.t1Gracilaria gracilis GNS1m malepolypeptidetig00000941_pilon 77396..78043 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4598.t1 ID=Ggra4598.t1|Name=Ggra4598.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=216bp
MAVVSAVPDGYAASPGHMLYIPAGLLMLFFGGFLVKASLCVISCVLVSRF
VYSLVEAVQLEPLCVVITVALAAVVTFLLVLEACEQGPHFATGIVLGTCI
ALTFYPAPIFSIVLAVVVLSAAFGLVFSLVPKEVGIFITSYGGAYMIFYG
MELIDSDVFEGSKLVPEFVKSDNIDMWFSVLSFLVVGLLGCCVQLILVSG
QAQPAYSRSHYIEIP*
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spliced messenger RNA

>Ggra4598.t1 ID=Ggra4598.t1|Name=Ggra4598.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=648bp|location=Sequence derived from alignment at tig00000941_pilon:77396..78043+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGTGGTGAGTGCGGTTCCGGATGGGTATGCCGCGTCGCCGGGCCA
TATGCTGTACATTCCCGCCGGTTTGCTCATGCTCTTCTTCGGAGGCTTTC
TTGTTAAGGCTTCCTTGTGTGTCATTTCCTGTGTGTTGGTTTCGCGCTTT
GTGTACTCGTTGGTGGAGGCCGTGCAGCTTGAGCCTTTGTGTGTGGTTAT
CACCGTTGCATTGGCGGCTGTTGTCACCTTCTTGCTCGTGTTGGAAGCGT
GTGAACAGGGGCCACACTTTGCTACTGGCATCGTGCTTGGCACTTGCATT
GCGCTTACCTTCTATCCGGCCCCCATCTTTTCTATTGTATTAGCTGTGGT
TGTACTCTCTGCGGCGTTCGGACTGGTGTTTTCATTGGTCCCAAAGGAGG
TGGGTATCTTTATTACCAGCTACGGTGGAGCGTATATGATCTTTTATGGA
ATGGAGCTCATTGATAGCGACGTTTTCGAAGGCTCGAAGCTCGTTCCAGA
GTTTGTCAAGTCGGACAACATCGATATGTGGTTTTCTGTGCTCAGTTTCC
TGGTGGTTGGTTTGTTGGGCTGCTGCGTGCAACTCATCCTCGTTAGTGGA
CAAGCTCAACCTGCGTACTCACGCTCGCACTACATCGAGATTCCTTGA
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protein sequence of Ggra4598.t1

>Ggra4598.t1 ID=Ggra4598.t1|Name=Ggra4598.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=216bp
MAVVSAVPDGYAASPGHMLYIPAGLLMLFFGGFLVKASLCVISCVLVSRF
VYSLVEAVQLEPLCVVITVALAAVVTFLLVLEACEQGPHFATGIVLGTCI
ALTFYPAPIFSIVLAVVVLSAAFGLVFSLVPKEVGIFITSYGGAYMIFYG
MELIDSDVFEGSKLVPEFVKSDNIDMWFSVLSFLVVGLLGCCVQLILVSG
QAQPAYSRSHYIEIP*
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mRNA from alignment at tig00000941_pilon:77396..78043+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4598.t1 ID=Ggra4598.t1|Name=Ggra4598.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=648bp|location=Sequence derived from alignment at tig00000941_pilon:77396..78043+ (Gracilaria gracilis GNS1m male)
ATGGCGGTGGTGAGTGCGGTTCCGGATGGGTATGCCGCGTCGCCGGGCCA
TATGCTGTACATTCCCGCCGGTTTGCTCATGCTCTTCTTCGGAGGCTTTC
TTGTTAAGGCTTCCTTGTGTGTCATTTCCTGTGTGTTGGTTTCGCGCTTT
GTGTACTCGTTGGTGGAGGCCGTGCAGCTTGAGCCTTTGTGTGTGGTTAT
CACCGTTGCATTGGCGGCTGTTGTCACCTTCTTGCTCGTGTTGGAAGCGT
GTGAACAGGGGCCACACTTTGCTACTGGCATCGTGCTTGGCACTTGCATT
GCGCTTACCTTCTATCCGGCCCCCATCTTTTCTATTGTATTAGCTGTGGT
TGTACTCTCTGCGGCGTTCGGACTGGTGTTTTCATTGGTCCCAAAGGAGG
TGGGTATCTTTATTACCAGCTACGGTGGAGCGTATATGATCTTTTATGGA
ATGGAGCTCATTGATAGCGACGTTTTCGAAGGCTCGAAGCTCGTTCCAGA
GTTTGTCAAGTCGGACAACATCGATATGTGGTTTTCTGTGCTCAGTTTCC
TGGTGGTTGGTTTGTTGGGCTGCTGCGTGCAACTCATCCTCGTTAGTGGA
CAAGCTCAACCTGCGTACTCACGCTCGCACTACATCGAGATTCCTTGA
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Coding sequence (CDS) from alignment at tig00000941_pilon:77396..78043+

>Ggra4598.t1 ID=Ggra4598.t1|Name=Ggra4598.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=648bp|location=Sequence derived from alignment at tig00000941_pilon:77396..78043+ (Gracilaria gracilis GNS1m male)
ATGGCGGTGGTGAGTGCGGTTCCGGATGGGTATGCCGCGTCGCCGGGCCA
TATGCTGTACATTCCCGCCGGTTTGCTCATGCTCTTCTTCGGAGGCTTTC
TTGTTAAGGCTTCCTTGTGTGTCATTTCCTGTGTGTTGGTTTCGCGCTTT
GTGTACTCGTTGGTGGAGGCCGTGCAGCTTGAGCCTTTGTGTGTGGTTAT
CACCGTTGCATTGGCGGCTGTTGTCACCTTCTTGCTCGTGTTGGAAGCGT
GTGAACAGGGGCCACACTTTGCTACTGGCATCGTGCTTGGCACTTGCATT
GCGCTTACCTTCTATCCGGCCCCCATCTTTTCTATTGTATTAGCTGTGGT
TGTACTCTCTGCGGCGTTCGGACTGGTGTTTTCATTGGTCCCAAAGGAGG
TGGGTATCTTTATTACCAGCTACGGTGGAGCGTATATGATCTTTTATGGA
ATGGAGCTCATTGATAGCGACGTTTTCGAAGGCTCGAAGCTCGTTCCAGA
GTTTGTCAAGTCGGACAACATCGATATGTGGTTTTCTGTGCTCAGTTTCC
TGGTGGTTGGTTTGTTGGGCTGCTGCGTGCAACTCATCCTCGTTAGTGGA
CAAGCTCAACCTGCGTACTCACGCTCGCACTACATCGAGATTCCTTGA
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