Ggra4629.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4629.t1
Unique NameGgra4629.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length326
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000941_piloncontigtig00000941_pilon:174748..175725 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4629Ggra4629Gracilaria gracilis GNS1m malegenetig00000941_pilon 174748..175725 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4629.t1.stop1Ggra4629.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000941_pilon 174748..174750 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4629.t1.CDS1Ggra4629.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000941_pilon 174748..175725 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4629.t1.exon1Ggra4629.t1.exon1Gracilaria gracilis GNS1m maleexontig00000941_pilon 174748..175725 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4629.t1.start1Ggra4629.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000941_pilon 175723..175725 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4629.t1Ggra4629.t1Gracilaria gracilis GNS1m malepolypeptidetig00000941_pilon 174748..175725 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4629.t1 ID=Ggra4629.t1|Name=Ggra4629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=326bp
MGWTRCCPTRSSSLDRASHGVLGDWTGPDVSFSTSSNGSTLVARVRLPTG
HRRLRLAVVARRHLRLELSARAGALHTRAVHTVALPVAVHAQPIGTEPQR
DGSVHVLLAVDNSHGDGDSDGDGGLQGDSVQAAAKMHMHMQQLLWPLRGA
PQAQQLPDGETVRRCAKSAQSTLQLQACVCERYEDDDDDDVAKRECALST
ITRCVRALRSAGVHDRASYVKHAALECGTQPHALLTSCVTRVMRLCMSGA
PVVTRQRATPPRLAPPHEHRNHHRADDDDDDDGDDGAAAGAQFTRYGVWW
GGVLLLLLVGATLCGVVGGIALSAR*
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spliced messenger RNA

>Ggra4629.t1 ID=Ggra4629.t1|Name=Ggra4629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=978bp|location=Sequence derived from alignment at tig00000941_pilon:174748..175725- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTTGGACGCGCTGCTGTCCGACGCGTTCCAGCAGTTTGGATCGTGC
TTCGCACGGAGTGCTGGGCGACTGGACCGGGCCGGATGTGAGCTTCTCCA
CCAGCAGCAATGGAAGCACGCTGGTGGCGCGCGTGCGGCTGCCCACCGGC
CACCGACGGCTGCGGCTGGCCGTGGTGGCGCGCCGCCACCTGCGACTGGA
GCTGAGTGCGCGCGCGGGTGCGCTGCATACGCGCGCCGTTCATACAGTAG
CATTGCCCGTAGCCGTGCATGCGCAACCCATTGGCACTGAACCGCAGCGC
GACGGCAGCGTGCATGTGCTGCTTGCCGTGGACAACAGCCACGGCGACGG
CGACAGCGACGGCGACGGCGGCTTGCAAGGCGACAGCGTGCAAGCGGCCG
CCAAGATGCACATGCACATGCAGCAGCTACTGTGGCCGCTACGCGGCGCG
CCGCAGGCGCAGCAGCTGCCGGACGGCGAGACGGTGCGCCGCTGCGCGAA
GAGCGCGCAGTCTACGCTGCAGCTGCAGGCGTGCGTGTGCGAACGCTACG
AGGACGACGACGACGACGACGTGGCCAAGAGAGAGTGCGCGCTAAGCACC
ATCACACGCTGCGTGCGCGCGCTACGAAGTGCAGGCGTGCACGACCGCGC
GTCGTACGTGAAGCACGCGGCGCTGGAATGTGGCACGCAGCCACACGCGC
TGCTTACGTCTTGCGTGACGCGCGTCATGCGGCTGTGTATGAGTGGCGCA
CCCGTTGTGACGCGGCAGCGTGCCACGCCGCCGCGCCTCGCGCCGCCTCA
CGAGCACCGCAACCACCACCGCGCCGACGACGACGACGACGACGACGGCG
ACGACGGCGCCGCCGCCGGCGCGCAGTTCACACGGTACGGCGTGTGGTGG
GGCGGCGTGTTGCTGCTGCTATTAGTGGGCGCCACGCTGTGCGGCGTGGT
GGGCGGCATTGCGCTGAGCGCGCGCTAA
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protein sequence of Ggra4629.t1

>Ggra4629.t1 ID=Ggra4629.t1|Name=Ggra4629.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=326bp
MGWTRCCPTRSSSLDRASHGVLGDWTGPDVSFSTSSNGSTLVARVRLPTG
HRRLRLAVVARRHLRLELSARAGALHTRAVHTVALPVAVHAQPIGTEPQR
DGSVHVLLAVDNSHGDGDSDGDGGLQGDSVQAAAKMHMHMQQLLWPLRGA
PQAQQLPDGETVRRCAKSAQSTLQLQACVCERYEDDDDDDVAKRECALST
ITRCVRALRSAGVHDRASYVKHAALECGTQPHALLTSCVTRVMRLCMSGA
PVVTRQRATPPRLAPPHEHRNHHRADDDDDDDGDDGAAAGAQFTRYGVWW
GGVLLLLLVGATLCGVVGGIALSAR*
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mRNA from alignment at tig00000941_pilon:174748..175725-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4629.t1 ID=Ggra4629.t1|Name=Ggra4629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=978bp|location=Sequence derived from alignment at tig00000941_pilon:174748..175725- (Gracilaria gracilis GNS1m male)
ATGGGTTGGACGCGCTGCTGTCCGACGCGTTCCAGCAGTTTGGATCGTGC
TTCGCACGGAGTGCTGGGCGACTGGACCGGGCCGGATGTGAGCTTCTCCA
CCAGCAGCAATGGAAGCACGCTGGTGGCGCGCGTGCGGCTGCCCACCGGC
CACCGACGGCTGCGGCTGGCCGTGGTGGCGCGCCGCCACCTGCGACTGGA
GCTGAGTGCGCGCGCGGGTGCGCTGCATACGCGCGCCGTTCATACAGTAG
CATTGCCCGTAGCCGTGCATGCGCAACCCATTGGCACTGAACCGCAGCGC
GACGGCAGCGTGCATGTGCTGCTTGCCGTGGACAACAGCCACGGCGACGG
CGACAGCGACGGCGACGGCGGCTTGCAAGGCGACAGCGTGCAAGCGGCCG
CCAAGATGCACATGCACATGCAGCAGCTACTGTGGCCGCTACGCGGCGCG
CCGCAGGCGCAGCAGCTGCCGGACGGCGAGACGGTGCGCCGCTGCGCGAA
GAGCGCGCAGTCTACGCTGCAGCTGCAGGCGTGCGTGTGCGAACGCTACG
AGGACGACGACGACGACGACGTGGCCAAGAGAGAGTGCGCGCTAAGCACC
ATCACACGCTGCGTGCGCGCGCTACGAAGTGCAGGCGTGCACGACCGCGC
GTCGTACGTGAAGCACGCGGCGCTGGAATGTGGCACGCAGCCACACGCGC
TGCTTACGTCTTGCGTGACGCGCGTCATGCGGCTGTGTATGAGTGGCGCA
CCCGTTGTGACGCGGCAGCGTGCCACGCCGCCGCGCCTCGCGCCGCCTCA
CGAGCACCGCAACCACCACCGCGCCGACGACGACGACGACGACGACGGCG
ACGACGGCGCCGCCGCCGGCGCGCAGTTCACACGGTACGGCGTGTGGTGG
GGCGGCGTGTTGCTGCTGCTATTAGTGGGCGCCACGCTGTGCGGCGTGGT
GGGCGGCATTGCGCTGAGCGCGCGCTAA
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Coding sequence (CDS) from alignment at tig00000941_pilon:174748..175725-

>Ggra4629.t1 ID=Ggra4629.t1|Name=Ggra4629.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=978bp|location=Sequence derived from alignment at tig00000941_pilon:174748..175725- (Gracilaria gracilis GNS1m male)
ATGGGTTGGACGCGCTGCTGTCCGACGCGTTCCAGCAGTTTGGATCGTGC
TTCGCACGGAGTGCTGGGCGACTGGACCGGGCCGGATGTGAGCTTCTCCA
CCAGCAGCAATGGAAGCACGCTGGTGGCGCGCGTGCGGCTGCCCACCGGC
CACCGACGGCTGCGGCTGGCCGTGGTGGCGCGCCGCCACCTGCGACTGGA
GCTGAGTGCGCGCGCGGGTGCGCTGCATACGCGCGCCGTTCATACAGTAG
CATTGCCCGTAGCCGTGCATGCGCAACCCATTGGCACTGAACCGCAGCGC
GACGGCAGCGTGCATGTGCTGCTTGCCGTGGACAACAGCCACGGCGACGG
CGACAGCGACGGCGACGGCGGCTTGCAAGGCGACAGCGTGCAAGCGGCCG
CCAAGATGCACATGCACATGCAGCAGCTACTGTGGCCGCTACGCGGCGCG
CCGCAGGCGCAGCAGCTGCCGGACGGCGAGACGGTGCGCCGCTGCGCGAA
GAGCGCGCAGTCTACGCTGCAGCTGCAGGCGTGCGTGTGCGAACGCTACG
AGGACGACGACGACGACGACGTGGCCAAGAGAGAGTGCGCGCTAAGCACC
ATCACACGCTGCGTGCGCGCGCTACGAAGTGCAGGCGTGCACGACCGCGC
GTCGTACGTGAAGCACGCGGCGCTGGAATGTGGCACGCAGCCACACGCGC
TGCTTACGTCTTGCGTGACGCGCGTCATGCGGCTGTGTATGAGTGGCGCA
CCCGTTGTGACGCGGCAGCGTGCCACGCCGCCGCGCCTCGCGCCGCCTCA
CGAGCACCGCAACCACCACCGCGCCGACGACGACGACGACGACGACGGCG
ACGACGGCGCCGCCGCCGGCGCGCAGTTCACACGGTACGGCGTGTGGTGG
GGCGGCGTGTTGCTGCTGCTATTAGTGGGCGCCACGCTGTGCGGCGTGGT
GGGCGGCATTGCGCTGAGCGCGCGCTAA
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