Ggra10969.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10969.t1
Unique NameGgra10969.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length182
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000938_piloncontigtig00000938_pilon:123722..124267 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10969Ggra10969Gracilaria gracilis GNS1m malegenetig00000938_pilon 123722..124267 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10969.t1.stop1Ggra10969.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000938_pilon 123722..123724 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10969.t1.CDS1Ggra10969.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000938_pilon 123722..124267 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10969.t1.exon1Ggra10969.t1.exon1Gracilaria gracilis GNS1m maleexontig00000938_pilon 123722..124267 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10969.t1.start1Ggra10969.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000938_pilon 124265..124267 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10969.t1Ggra10969.t1Gracilaria gracilis GNS1m malepolypeptidetig00000938_pilon 123722..124267 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10969.t1 ID=Ggra10969.t1|Name=Ggra10969.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=182bp
MEAYRIVADIEADVIAMNDVLKTIEPLRAHMRLEESIEIEKEAESIVDFV
LESGRLAIIASQNAAEVYRASREVAVLKSEVLVAENEARKVEKELEEKQN
EADNSGKACAECNGLRANVETLRKGRKEAARKAGEAAKNSREKRRNAAKH
RQAVEDNREKAKEAKDGLVSLVDKNKKRAAI*
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spliced messenger RNA

>Ggra10969.t1 ID=Ggra10969.t1|Name=Ggra10969.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=546bp|location=Sequence derived from alignment at tig00000938_pilon:123722..124267- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAGCGTACAGAATAGTTGCCGATATCGAGGCGGACGTTATTGCGAT
GAATGATGTGTTGAAGACGATTGAACCGCTCAGGGCGCATATGAGGTTGG
AAGAAAGCATAGAGATTGAAAAAGAGGCTGAAAGCATTGTGGACTTTGTC
CTGGAATCCGGGCGGCTCGCAATCATTGCAAGCCAAAATGCGGCTGAGGT
GTACAGAGCGAGTCGGGAGGTTGCGGTGCTGAAGAGTGAAGTGCTGGTTG
CGGAGAATGAAGCAAGGAAAGTGGAGAAAGAGCTTGAAGAGAAGCAGAAT
GAAGCAGATAACAGCGGCAAGGCATGCGCGGAATGTAATGGGTTAAGGGC
AAACGTTGAGACGCTGAGAAAGGGTCGCAAGGAGGCAGCGAGGAAAGCGG
GCGAGGCGGCAAAGAACAGCCGTGAGAAACGCAGGAATGCGGCGAAGCAC
CGTCAGGCTGTTGAAGATAACAGGGAGAAGGCCAAAGAAGCCAAGGATGG
ACTTGTTTCTTTGGTGGACAAAAACAAGAAGCGAGCTGCAATCTAA
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protein sequence of Ggra10969.t1

>Ggra10969.t1 ID=Ggra10969.t1|Name=Ggra10969.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=182bp
MEAYRIVADIEADVIAMNDVLKTIEPLRAHMRLEESIEIEKEAESIVDFV
LESGRLAIIASQNAAEVYRASREVAVLKSEVLVAENEARKVEKELEEKQN
EADNSGKACAECNGLRANVETLRKGRKEAARKAGEAAKNSREKRRNAAKH
RQAVEDNREKAKEAKDGLVSLVDKNKKRAAI*
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mRNA from alignment at tig00000938_pilon:123722..124267-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10969.t1 ID=Ggra10969.t1|Name=Ggra10969.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=546bp|location=Sequence derived from alignment at tig00000938_pilon:123722..124267- (Gracilaria gracilis GNS1m male)
ATGGAAGCGTACAGAATAGTTGCCGATATCGAGGCGGACGTTATTGCGAT
GAATGATGTGTTGAAGACGATTGAACCGCTCAGGGCGCATATGAGGTTGG
AAGAAAGCATAGAGATTGAAAAAGAGGCTGAAAGCATTGTGGACTTTGTC
CTGGAATCCGGGCGGCTCGCAATCATTGCAAGCCAAAATGCGGCTGAGGT
GTACAGAGCGAGTCGGGAGGTTGCGGTGCTGAAGAGTGAAGTGCTGGTTG
CGGAGAATGAAGCAAGGAAAGTGGAGAAAGAGCTTGAAGAGAAGCAGAAT
GAAGCAGATAACAGCGGCAAGGCATGCGCGGAATGTAATGGGTTAAGGGC
AAACGTTGAGACGCTGAGAAAGGGTCGCAAGGAGGCAGCGAGGAAAGCGG
GCGAGGCGGCAAAGAACAGCCGTGAGAAACGCAGGAATGCGGCGAAGCAC
CGTCAGGCTGTTGAAGATAACAGGGAGAAGGCCAAAGAAGCCAAGGATGG
ACTTGTTTCTTTGGTGGACAAAAACAAGAAGCGAGCTGCAATCTAA
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Coding sequence (CDS) from alignment at tig00000938_pilon:123722..124267-

>Ggra10969.t1 ID=Ggra10969.t1|Name=Ggra10969.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=546bp|location=Sequence derived from alignment at tig00000938_pilon:123722..124267- (Gracilaria gracilis GNS1m male)
ATGGAAGCGTACAGAATAGTTGCCGATATCGAGGCGGACGTTATTGCGAT
GAATGATGTGTTGAAGACGATTGAACCGCTCAGGGCGCATATGAGGTTGG
AAGAAAGCATAGAGATTGAAAAAGAGGCTGAAAGCATTGTGGACTTTGTC
CTGGAATCCGGGCGGCTCGCAATCATTGCAAGCCAAAATGCGGCTGAGGT
GTACAGAGCGAGTCGGGAGGTTGCGGTGCTGAAGAGTGAAGTGCTGGTTG
CGGAGAATGAAGCAAGGAAAGTGGAGAAAGAGCTTGAAGAGAAGCAGAAT
GAAGCAGATAACAGCGGCAAGGCATGCGCGGAATGTAATGGGTTAAGGGC
AAACGTTGAGACGCTGAGAAAGGGTCGCAAGGAGGCAGCGAGGAAAGCGG
GCGAGGCGGCAAAGAACAGCCGTGAGAAACGCAGGAATGCGGCGAAGCAC
CGTCAGGCTGTTGAAGATAACAGGGAGAAGGCCAAAGAAGCCAAGGATGG
ACTTGTTTCTTTGGTGGACAAAAACAAGAAGCGAGCTGCAATCTAA
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