Ggra5791.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5791.t1
Unique NameGgra5791.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length125
Homology
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BLAST of Ggra5791.t1 vs. uniprot
Match: A0A2V3INJ6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INJ6_9FLOR)

HSP 1 Score: 156 bits (394), Expect = 1.400e-46
Identity = 74/111 (66.67%), Postives = 90/111 (81.08%), Query Frame = 0 
Query:    1 MVKYRASVIVPFARDRVWKLMSDKTNLGKCYVNITKSELAASGPAGARGEGTKFDCAFGLQGADIEVDCTCVKYEDPGLCQFVGLAKLFRSQDTLEFESKDDGTKFTAELN 111
            MVKYRAS++VP+A++RVWKLMSD TNL K  +NITKS LA S   GA GEGTK+DCAF L G++I V+  C+KY++P  CQF+GLAKLFRSQDTLEFE + +GTK TAE N
Sbjct:    1 MVKYRASIVVPYAQERVWKLMSDWTNLAKWDINITKSVLAESEQPGACGEGTKYDCAFSLNGSEIPVNYNCIKYDEPRTCQFLGLAKLFRSQDTLEFEKEGEGTKLTAEFN 111
The following BLAST results are available for this feature:
BLAST of Ggra5791.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INJ61.400e-4666.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019587Polyketide cyclase/dehydrasePFAMPF10604Polyketide_cyc2coord: 1..107
e-value: 6.0E-7
score: 29.9
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 1..115
e-value: 4.8E-7
score: 31.8
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 1..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:257529..257903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5791.t1Ggra5791.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 257529..257903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5791.t1 ID=Ggra5791.t1|Name=Ggra5791.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=125bp
MVKYRASVIVPFARDRVWKLMSDKTNLGKCYVNITKSELAASGPAGARGE
GTKFDCAFGLQGADIEVDCTCVKYEDPGLCQFVGLAKLFRSQDTLEFESK
DDGTKFTAELNPLSEVCCIHSHLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019587Polyketide_cyclase/dehydratase
IPR023393START-like_dom_sf