Ggra10536.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10536.t1
Unique NameGgra10536.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length414
Homology
BLAST of Ggra10536.t1 vs. uniprot
Match: A0A2V3IXL3 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXL3_9FLOR)

HSP 1 Score: 713 bits (1840), Expect = 3.140e-257
Identity = 363/413 (87.89%), Postives = 389/413 (94.19%), Query Frame = 0
Query:    1 MRFLNLHEYQSQQLMRESGINVPKGFDVDSRNAALNAANSFDGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAENMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAAADPSAITKIAVNMAQGLTKEDTKKCAKALGFTDDESIKVASEQVEKLYQMFIEKDATLVEVNPIAETPEGDVICIDAKINFDDNAEFRHKDLFDMRDTSQEDPREVRAQKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDIIAQGIINAAKTIDMRIPVVVRLQGNKVEEAKELIQASGLKLVATDDLDQAAKKACTLAEIVRLANSVDVNVSFHS 413
            +R LNLHEYQSQQLMR++GINVP+GFDV+SR AAL+AA SFDGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAE+MIGQ+LVTKQTGEQGRLCSKALVTER+YLRREMYFAITYDRESQGPVI+ASRVGGTSIEDIAAADPSAITKI VNM +GLTK D +KCA+ALGF +  +I  A +QVEKLY +FIEKDATLVEVNPIAETPEGDV+CIDAKINFDDNAEFRHK++F MRD SQEDPREV A   DLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDD KVEAILVNIFGGIMRCD+IAQGIINAAKTIDMR+PVVVRLQGNKV+EAK LI+ASGLKLVATDDLDQAAKKACTLAEIVRLAN+VDV V+F S
Sbjct:   32 IRLLNLHEYQSQQLMRDAGINVPRGFDVNSREAALSAAKSFDGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAESMIGQHLVTKQTGEQGRLCSKALVTERMYLRREMYFAITYDRESQGPVIVASRVGGTSIEDIAAADPSAITKIPVNMVEGLTKADAEKCARALGFANQHAIDKAIDQVEKLYSLFIEKDATLVEVNPIAETPEGDVVCIDAKINFDDNAEFRHKEIFSMRDVSQEDPREVTASAHDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDTKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRVPVVVRLQGNKVDEAKALIRASGLKLVATDDLDQAAKKACTLAEIVRLANTVDVTVAFQS 444          
BLAST of Ggra10536.t1 vs. uniprot
Match: R7QIX1 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIX1_CHOCR)

HSP 1 Score: 648 bits (1671), Expect = 1.560e-231
Identity = 331/415 (79.76%), Postives = 368/415 (88.67%), Query Frame = 0
Query:    1 MRFLNLHEYQSQQLMRESGINVPKGFDVDSRNAALNAANSF--DGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAENMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAAADPSAITKIAVNMAQGLTKEDTKKCAKALGFTDDESIKVASEQVEKLYQMFIEKDATLVEVNPIAETPEGDVICIDAKINFDDNAEFRHKDLFDMRDTSQEDPREVRAQKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDIIAQGIINAAKTIDMRIPVVVRLQGNKVEEAKELIQASGLKLVATDDLDQAAKKACTLAEIVRLANSVDVNVSFHS 413
            +R LNLHEYQSQ+LMR +GI VP+GFDVDSR AAL AA      G DIVVKAQVLAGGRGLG FKNGFKGGVH+CY P+ AAD AE MIGQ+LVTKQTG  GRLCSKALVTER+YLRREMYFAI YDRESQGPVI+ASRVGGTSIEDIAAADP+AITK+ V++  GL+KED + CAKALGF   E ++ A  QVEKLY+MFIEKDATL+E+NP+AET +GDV+CIDAKINFDDNAEFRH D+F+ RDTSQEDPREVRA KFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGG+PANFLDVGGSATE QV EAF ILNDDP VEAILVNIFGGIMRCD+IAQGII+AA  +DMR+PV+VRLQGNKV+EAK+LI+ SGLKLVA+DDLDQAAKKAC LAEIV+LAN+ DV VSF S
Sbjct:   28 VRHLNLHEYQSQELMRGAGIAVPRGFDVDSRAAALAAAEEIASTGADIVVKAQVLAGGRGLGAFKNGFKGGVHMCYTPQNAADTAEKMIGQHLVTKQTGADGRLCSKALVTERLYLRREMYFAILYDRESQGPVIVASRVGGTSIEDIAAADPTAITKVPVDIRAGLSKEDAQTCAKALGFEGGEGLEKAVGQVEKLYEMFIEKDATLLEINPLAETSDGDVVCIDAKINFDDNAEFRHADIFEKRDTSQEDPREVRASKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGSATEEQVMEAFTILNDDPNVEAILVNIFGGIMRCDVIAQGIISAANKLDMRVPVIVRLQGNKVDEAKDLIRNSGLKLVASDDLDQAAKKACKLAEIVKLANAADVKVSFSS 442          
BLAST of Ggra10536.t1 vs. uniprot
Match: A0A7S3A3L8 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3L8_9RHOD)

HSP 1 Score: 586 bits (1510), Expect = 3.650e-207
Identity = 302/412 (73.30%), Postives = 350/412 (84.95%), Query Frame = 0
Query:    1 MRFLNLHEYQSQQLMRESGINVPKGFDVDSRNAALNAANSF-DGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAENMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAAADPSAITKIAVNMAQGLTKEDTKKCAKALGFTDDESIKVASEQVEKLYQMFIEKDATLVEVNPIAETPEGDVICIDAKINFDDNAEFRHKDLFDMRDTSQEDPREVRAQKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDIIAQGIINAAKTIDMRIPVVVRLQGNKVEEAKELIQASGLKLVATDDLDQAAKKACTLAEIVRLANSVDVNVSF 411
            +RFL+LHEYQSQ+LMR  GI VP+G  V ++  AL AA S  DG DIVVKAQVLAGGRGLGTF+NGFK GVH+CYD + AAD+A  M GQ LVTKQTG  G+LCSK L+TER+Y+RREMY  I YDRESQGP IIASR GGTSIEDIAA++P AI  I VNMA+G+T E     A+A+GF   ES K  +EQV+KLYQ+FIEKDATLVE+NP+ ETP+G+V+CIDAKINFDDNA+FR  D+F MRDT+QEDPREVRA +  LNYIGLDGNIGCLVNGAGLAMATMDIIKLHGG+PANFLDVGG AT+ QVTEAF ILNDDPKV+AILVNIFGGIMRCD+IAQGII AAKTI +R+P+VVRLQGNKV+EAK+LI  SGL+++A DDLD+A KKA  LAEIV++AN+VDVNVSF
Sbjct:   20 VRFLHLHEYQSQELMRGYGIRVPRGTAVTTKEEALAAAKSLGDGTDIVVKAQVLAGGRGLGTFENGFKSGVHLCYDSKAAADIASKMFGQNLVTKQTGAGGKLCSKVLITERMYMRREMYLGILYDRESQGPTIIASREGGTSIEDIAASNPEAIKNIPVNMAEGITPEVADAVAEAMGF-HGESKKQCAEQVKKLYQLFIEKDATLVEINPMIETPQGEVVCIDAKINFDDNADFRQPDIFAMRDTTQEDPREVRAAEAGLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGNPANFLDVGGGATDKQVTEAFTILNDDPKVQAILVNIFGGIMRCDVIAQGIITAAKTIQLRVPLVVRLQGNKVDEAKKLIFDSGLRIIAADDLDEAGKKAVKLAEIVQIANTVDVNVSF 430          
BLAST of Ggra10536.t1 vs. uniprot
Match: A0A7S1TA51 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TA51_9RHOD)

HSP 1 Score: 567 bits (1462), Expect = 8.680e-200
Identity = 289/413 (69.98%), Postives = 341/413 (82.57%), Query Frame = 0
Query:    1 MRFLNLHEYQSQQLMRESGINVPKGFDVDSRNAALNAANSFD--GKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAENMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAAADPSAITKIAVNMAQGLTKEDTKKCAKALGFTDDESIKVASEQVEKLYQMFIEKDATLVEVNPIAETPEGDVICIDAKINFDDNAEFRHKDLFDMRDTSQEDPREVRAQKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDIIAQGIINAAKTIDMRIPVVVRLQGNKVEEAKELIQASGLKLVATDDLDQAAKKACTLAEIVRLANSVDVNVSF 411
            +RFL+LHEYQSQ L+R  GI VP GF V ++  AL+AA      G DIVVKAQVLAGGRGLG F NGFK GVH+CYDPEKAA VA +M+G  L+TKQTG +GR CS  L+T+RVY+RREMYFAI YDRESQGPV++AS  GGTSIEDIAA DP+AI KI V++ +G++ E   + A+ALGF   E +   ++QV++LYQ F+EKDATLVEVNP+AETPEG VI IDAK+NFDDNA FR  D+F MRD SQEDPREVRA K +LNYIGLDGNIGCLVNGAGLAMATMDIIKL+GG+PANFLDVGG AT+ QVTEAF ILN+DP+VEAILVNIFGGIMRCD+IAQGII AAKTI++R+P+VVRLQGNKVEEAK LI  S L++++ DDLD AA+KAC LA+IV++A   DV V F
Sbjct:   23 VRFLSLHEYQSQDLLRSFGIKVPVGFTVRTKEEALDAAKKIHATGSDIVVKAQVLAGGRGLGKFSNGFKSGVHLCYDPEKAAGVATSMLGNRLITKQTGAEGRPCSSVLITQRVYMRREMYFAILYDRESQGPVVVASPRGGTSIEDIAAEDPTAIKKIPVSVREGMSDEVAVEVAQALGFEKPEQVSDCADQVKRLYQFFVEKDATLVEVNPLAETPEGAVIAIDAKVNFDDNASFRQPDVFKMRDISQEDPREVRASKSELNYIGLDGNIGCLVNGAGLAMATMDIIKLYGGNPANFLDVGGGATDQQVTEAFTILNEDPRVEAILVNIFGGIMRCDVIAQGIITAAKTINLRVPLVVRLQGNKVEEAKTLILNSKLRIISADDLDDAARKACKLADIVKMAQDADVGVRF 435          
BLAST of Ggra10536.t1 vs. uniprot
Match: A0A7S1EQ20 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQ20_9RHOD)

HSP 1 Score: 563 bits (1451), Expect = 4.710e-198
Identity = 287/411 (69.83%), Postives = 335/411 (81.51%), Query Frame = 0
Query:    1 MRFLNLHEYQSQQLMRESGINVPKGFDVDSRNAALNAANSFDGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAENMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAAADPSAITKIAVNMAQGLTKEDTKKCAKALGFTDDESIKVASEQVEKLYQMFIEKDATLVEVNPIAETPEGDVICIDAKINFDDNAEFRHKDLFDMRDTSQEDPREVRAQKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDIIAQGIINAAKTIDMRIPVVVRLQGNKVEEAKELIQASGLKLVATDDLDQAAKKACTLAEIVRLANSVDVNVSF 411
            +R LNLHEYQ+QQLM+E  I VP+G  V S+  AL AA     +DIVVKAQVLAGGRGLGTF NGFK GVH+C  PE AA +A  M+GQ L+TKQTG +GR CS  L+TER+Y+RREMY AITYDRESQGPV++AS  GGTSIEDIA  DPSAI KI +++   ++ E     AKALG   DE+I+ A+ QV++LY +F+EKDAT+VEVNP  ETPEGD++ +DAKINFDDNA FR ++L D RDTSQEDPREVRA   DLNYIGLDGNIGCLVNGAGLAMATMDIIKL+GG PANFLDVGGSA+E QVTEAF +LN+DPKV+AILVNIFGGIMRCD+IAQGIINAAK I+MR+P+VVRLQGNKV+EAK LI  S L +V+ DDLD AAKKACTLAEI  LAN + V+V F
Sbjct:   29 VRRLNLHEYQAQQLMKEMKIAVPRGTAVSSKEEALAAAKELGSRDIVVKAQVLAGGRGLGTFANGFKSGVHVCESPEDAATIAGKMLGQRLITKQTGAEGRPCSTVLITERLYMRREMYLAITYDRESQGPVVVASSRGGTSIEDIARDDPSAIKKIKLDVNHPMSNETATTVAKALGLRSDETIRKAAYQVQRLYDLFLEKDATMVEVNPFVETPEGDIVSVDAKINFDDNAAFRQRELHDKRDTSQEDPREVRASAADLNYIGLDGNIGCLVNGAGLAMATMDIIKLYGGSPANFLDVGGSASEMQVTEAFTLLNEDPKVQAILVNIFGGIMRCDVIAQGIINAAKVINMRVPLVVRLQGNKVDEAKVLISESKLHIVSADDLDDAAKKACTLAEITHLANEIGVDVQF 439          
BLAST of Ggra10536.t1 vs. uniprot
Match: A0A5J4Z651 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z651_PORPP)

HSP 1 Score: 544 bits (1402), Expect = 1.410e-190
Identity = 278/411 (67.64%), Postives = 332/411 (80.78%), Query Frame = 0
Query:    1 MRFLNLHEYQSQQLMRESGINVPKGFDVDSRNAALNAANSFDGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAENMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAAADPSAITKIAVNMAQGLTKEDTKKCAKALGFTDDESIKVASEQVEKLYQMFIEKDATLVEVNPIAETPEGDVICIDAKINFDDNAEFRHKDLFDMRDTSQEDPREVRAQKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDIIAQGIINAAKTIDMRIPVVVRLQGNKVEEAKELIQASGLKLVATDDLDQAAKKACTLAEIVRLANSVDVNVSF 411
            +R L+LHEYQSQ +M+E GI VPKG  V ++  AL  A      DIVVKAQVLAGGRGLG+F NGFK GVH+C+ PE AA+ A  M+GQ L+TKQTG  GR C+K L+TER+Y+RREMY A  YDRESQGPVI+AS  GGTSIEDIA  DP AI KI +++  G+T++  +  A+ALG       + A+EQV+ LY +FIEKDAT+VEVNP+ ETP+G V+C+DAKINFDDNA FR +++  +RDT+QEDPREVRA K DLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVGGSA E QVTEAF ILN+DPKVEAILVNIFGGIMRCD+IAQGIINAA  ++MR+P+VVRLQGNK++EAK+LI+ SGL+++A DDLD AA +AC LAEI  LAN  DV+V F
Sbjct:   35 VRALSLHEYQSQGIMKEMGIAVPKGEAVTTKEDALRVAQQLGTNDIVVKAQVLAGGRGLGSFANGFKSGVHVCFTPEDAANKAGKMLGQRLITKQTGAAGRPCAKVLITERLYMRREMYLAFLYDRESQGPVIVASSRGGTSIEDIARDDPDAIVKIPMSIETGMTEKIAQDTAEALGLEGAVG-QAAAEQVKLLYTLFIEKDATMVEVNPLVETPDGKVVCVDAKINFDDNAAFRQQEIHALRDTTQEDPREVRAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGSPANFLDVGGSANEQQVTEAFTILNEDPKVEAILVNIFGGIMRCDVIAQGIINAASVLNMRVPLVVRLQGNKMKEAKQLIEQSGLRIIAADDLDLAASRACKLAEITHLANEADVDVFF 444          
BLAST of Ggra10536.t1 vs. uniprot
Match: A0A1X6NIH4 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIH4_PORUM)

HSP 1 Score: 508 bits (1309), Expect = 5.510e-177
Identity = 268/401 (66.83%), Postives = 312/401 (77.81%), Query Frame = 0
Query:   15 MRESGINVPKGFDVDS---RNAALNAANSFDG-KDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAENMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAAADPSAITKIAVNMAQGLTKEDTKKCAKALGFTDDESIKVASEQVEKLYQMFIEKDATLVEVNPIAETPEGDVICIDAKINFDDNAEFRHKDLFDMRDTSQEDPREVRAQKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDIIAQGIINAAKTIDMRIPVVVRLQGNKVEEAKELIQASGLKLVATDDLDQAAKKACTLAEIVRLANSVDVNVSF 411
            MRE+G+ VPK   V S     AA+    S DG  D+VVKAQVLAGGRGLGTF NGFKGGVH CY P  A + A  M+G  LVTKQTG +GR C+  ++ ERVYLRREMYFAI YDRESQGPVI+AS VGGTSIEDIAAA P AI K+ V++A GL +ED  + A ALGF  D +   A+ QV +LY +F+ KDATL+EVNP+AETP+G+V+C+DAKI+FDDNA FR   +F  RDTSQE+PREV A    LNYIGLDGNI C+VNGAGLAMATMDIIKLHGG+PANFLDVGG ATE QVT AF+ILN+DP V AILVNIFGGIMRCD+IAQGIINAAKT+D+R+PVVVRLQGN+V+ AK LI  SGL+++A DDLD AA  A  +A IV LA    V VSF
Sbjct:    1 MREAGVAVPKSVAVTSVADAEAAVATLTSGDGPSDVVVKAQVLAGGRGLGTFTNGFKGGVHTCYTPASAVETAAKMLGGTLVTKQTGARGRPCNTVMLAERVYLRREMYFAILYDRESQGPVIVASAVGGTSIEDIAAATPDAIVKVPVDLAVGLREEDAGRVAAALGFAGDGAA-AAAAQVRRLYDLFLAKDATLLEVNPMAETPDGEVVCLDAKISFDDNAAFRQAPIFAQRDTSQEEPREVAADAAGLNYIGLDGNIACMVNGAGLAMATMDIIKLHGGEPANFLDVGGGATEAQVTSAFRILNEDPAVRAILVNIFGGIMRCDVIAQGIINAAKTLDLRVPVVVRLQGNQVDAAKALIAESGLRIIANDDLDAAASTAVRVARIVDLAAEAKVGVSF 400          
BLAST of Ggra10536.t1 vs. uniprot
Match: A0A067CEF9 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEF9_SAPPC)

HSP 1 Score: 476 bits (1226), Expect = 5.860e-164
Identity = 250/415 (60.24%), Postives = 306/415 (73.73%), Query Frame = 0
Query:    1 MRFLNLHEYQSQQLMRESGINVPKGFDVDSRNAALNAANSFDG----KDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAENMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAAADPSAITKIAVNMAQGLTKEDTKKCAKALGFTDDESIKVASEQVEKLYQMFIEKDATLVEVNPIAETPEGDVICIDAKINFDDNAEFRHKDLFDMRDTSQEDPREVRAQKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDIIAQGIINAAKTIDMRIPVVVRLQGNKVEEAKELIQASGLKLVATDDLDQAAKKACTLAEIVRLANSVDVNVSF 411
            +R LNLHEYQS ++M+  G+ +P      +   A  A N+  G    KD+V+KAQ L GGRGLG FKNGFKGGVH+C  PE A + AE M+G+ LVTKQTGE+G   +K  + ERVY+RREMYF+I  DR S GPV++AS  GGTSIED+A A P  I K AVN+  G T E   + A  +G +  ES K   E +  LY MFI  DATLVE+NP+AETPEG+V   DAKINFDDNA FRHKD+F  RD +QEDPREV A  +DLNYIGLDGNIGCLVNGAGLAMATMDII L GG PANFLDVGG ATE+QV +AF+ILN DP+V++ILVNIFGGIMRCD+IA G+I AAK + M+ P+V+RLQG  VE+A++LI+ SG +++  +DLD AA+KA  +A+IV  A  V VNVSF
Sbjct:   21 VRRLNLHEYQSMEIMKSFGVAIPASLHATTPAEAEAAYNTLKGGDATKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKPEDAKNFAEKMLGETLVTKQTGEKGIEVAKVFLMERVYMRREMYFSILMDRASNGPVLVASPAGGTSIEDVAHATPELIFKEAVNITTGPTSEQLNRLAANMGLSG-ESQKRGVELMNNLYNMFIGTDATLVEINPLAETPEGNVYACDAKINFDDNASFRHKDIFAKRDKTQEDPREVEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANFLDVGGGATESQVKKAFEILNADPQVKSILVNIFGGIMRCDVIAAGVIAAAKDLGMKKPIVIRLQGTNVEKARQLIENSGFRMIVANDLDDAAQKAVKIADIVAQAEEVHVNVSF 434          
BLAST of Ggra10536.t1 vs. uniprot
Match: A0A0G4EP40 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EP40_VITBC)

HSP 1 Score: 473 bits (1217), Expect = 1.410e-162
Identity = 245/415 (59.04%), Postives = 318/415 (76.63%), Query Frame = 0
Query:    2 RFLNLHEYQSQQLMRESGINVPKGFDVDSRNAALNAANSFDGK----DIVVKAQVLAGGRGLGTFK-NGFKGGVHICYDPEKAADVAENMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAAADPSAITKIAVNMAQGLTKEDTKKCAKALGFTDDESIKVASEQVEKLYQMFIEKDATLVEVNPIAETPEGDVICIDAKINFDDNAEFRHKDLFDMRDTSQEDPREVRAQKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDIIAQGIINAAKTIDMRIPVVVRLQGNKVEEAKELIQASGLKLVATDDLDQAAKKACTLAEIVRLANSVDVNVSF 411
            R+LNLHEYQS Q+M+   ++ PKG    +   A  AA++   +    D VVKAQVLAGGRGLG FK NGF+GGVH C  P K  ++A+ M+G  LVTKQTGE G+ C+   V ER+YLRRE YFAI  DR S GP++I S VGGTSIEDIAA DP+AI K+ +++  GL++   ++ A+ L F  D  +  A++ +  LY+MFI+KD TLVE+NP AET +G V+  DAK+NFDDNAEFRH+D+F+MRDT+QEDPREV+A +FDLNY+GLDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGG A++TQV EAF+IL +DPKV+AILVNIFGGIMRCD IA G+I+A++ I +  P+VVRL+G   E+AK+LI  SGLK++ + DL ++A KA  +AEI+ LA S +++V+F
Sbjct:   24 RWLNLHEYQSVQVMQSYHVHTPKGLPAFTGREAEAAASALQAEQGDIDFVVKAQVLAGGRGLGYFKENGFQGGVHQCQSPSKVKEIAKKMLGNTLVTKQTGEAGKPCNAIFVCERLYLRREKYFAILMDRSSGGPLMIGSAVGGTSIEDIAAKDPTAIVKMPIDITVGLSEAQAREFAEKLAFEGDR-VDQAAQCIMGLYKMFIDKDCTLVEINPFAETHDGRVMVCDAKVNFDDNAEFRHEDIFEMRDTTQEDPREVQAARFDLNYVGLDGNIGCMVNGAGLAMATMDIIKLNGGSPANFLDVGGGASKTQVVEAFRILQNDPKVKAILVNIFGGIMRCDTIALGVIHASQEIGLSKPLVVRLEGTNQEQAKKLIDESGLKMLFSTDLSESASKAVKMAEIIELAESAELDVAF 437          
BLAST of Ggra10536.t1 vs. uniprot
Match: SUCB1 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=12 Tax=Murinae TaxID=39107 RepID=SUCB1_MOUSE)

HSP 1 Score: 470 bits (1210), Expect = 3.690e-161
Identity = 240/410 (58.54%), Postives = 308/410 (75.12%), Query Frame = 0
Query:    2 RFLNLHEYQSQQLMRESGINVPKGFDVDSRNAALNAANSFDGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAENMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAAADPSAITKIAVNMAQGLTKEDTKKCAKALGFTDDESIKVASEQVEKLYQMFIEKDATLVEVNPIAETPEGDVICIDAKINFDDNAEFRHKDLFDMRDTSQEDPREVRAQKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDIIAQGIINAAKTIDMRIPVVVRLQGNKVEEAKELIQASGLKLVATDDLDQAAKKACTLAEIVRLANSVDVNVSF 411
            R L+LHEY S +L++E+G++VPKGF   S + A   A     KD+V+KAQVLAGGRG GTF +G KGGV I + PE+A  V+  MIGQ L+TKQTGE+GR+C++ LV ER Y RRE YFAIT +R  QGPV+I S  GG +IED+AA +P AI K  +++ +G+ KE     A+ +GF  +  +  A+E + KLY +F++ DAT+VE+NP+ E  +G V+C+DAKINFD N+ +R K +FD++D SQED R+  A   D+NYIGLDG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVGG AT  QVTEAFK++  D KV+AILVNIFGGIMRCD+IAQGI+ A K +++RIPVVVRLQG +V++AK LI  SGLK++A DDLD+AAK    L+EIV LA    V+V F
Sbjct:   51 RTLSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFPSN-IVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIFDLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIVTLAKEAHVDVKF 459          
The following BLAST results are available for this feature:
BLAST of Ggra10536.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXL33.140e-25787.89Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
R7QIX11.560e-23179.76Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S3A3L83.650e-20773.30Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S1TA518.680e-20069.98Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S1EQ204.710e-19869.83Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A5J4Z6511.410e-19067.64Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A1X6NIH45.510e-17766.83Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A067CEF95.860e-16460.24Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A0G4EP401.410e-16259.04Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
SUCB13.690e-16158.54Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005809Succinate--CoA synthetase, beta subunitPIRSFPIRSF001554SucCS_betacoord: 4..398
e-value: 1.8E-146
score: 485.7
IPR005809Succinate--CoA synthetase, beta subunitTIGRFAMTIGR01016TIGR01016coord: 4..396
e-value: 1.9E-133
score: 443.1
IPR005809Succinate--CoA synthetase, beta subunitPANTHERPTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINcoord: 2..399
IPR005809Succinate--CoA synthetase, beta subunitHAMAPMF_00558Succ_CoA_betacoord: 4..397
score: 39.160969
IPR013815ATP-grasp fold, subdomain 1GENE3D3.30.1490.20coord: 24..120
e-value: 6.0E-88
score: 296.1
NoneNo IPR availableGENE3D3.30.470.20coord: 4..245
e-value: 6.0E-88
score: 296.1
NoneNo IPR availablePANTHERPTHR11815:SF10SUCCINATE--COA LIGASE [ADP-FORMING] SUBUNIT BETA, MITOCHONDRIALcoord: 2..399
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 4..249
IPR013650ATP-grasp fold, succinyl-CoA synthetase-typePFAMPF08442ATP-grasp_2coord: 5..213
e-value: 2.7E-66
score: 223.0
IPR005811ATP-citrate lyase/succinyl-CoA ligasePFAMPF00549Ligase_CoAcoord: 273..392
e-value: 4.9E-26
score: 91.4
IPR016102Succinyl-CoA synthetase-likeGENE3D3.40.50.261coord: 251..398
e-value: 1.6E-58
score: 198.8
IPR016102Succinyl-CoA synthetase-likeSUPERFAMILY52210Succinyl-CoA synthetase domainscoord: 250..396
IPR017866Succinyl-CoA synthetase, beta subunit, conserved sitePROSITEPS01217SUCCINYL_COA_LIG_3coord: 268..292
IPR011761ATP-grasp foldPROSITEPS50975ATP_GRASPcoord: 12..241
score: 10.13031

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:50362..51603 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10536.t1Ggra10536.t1Gracilaria gracilis GNS1m malemRNAtig00000904_pilon 50362..51603 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10536.t1 ID=Ggra10536.t1|Name=Ggra10536.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=414bp
MRFLNLHEYQSQQLMRESGINVPKGFDVDSRNAALNAANSFDGKDIVVKA
QVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAENMIGQYLVTKQTGEQG
RLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAAAD
PSAITKIAVNMAQGLTKEDTKKCAKALGFTDDESIKVASEQVEKLYQMFI
EKDATLVEVNPIAETPEGDVICIDAKINFDDNAEFRHKDLFDMRDTSQED
PREVRAQKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDV
GGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDIIAQGIINAAKTI
DMRIPVVVRLQGNKVEEAKELIQASGLKLVATDDLDQAAKKACTLAEIVR
LANSVDVNVSFHS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005809Succ_CoA_synthase_bsu
IPR013815ATP_grasp_subdomain_1
IPR013650ATP-grasp_succ-CoA_synth-type
IPR005811CoA_ligase
IPR016102Succinyl-CoA_synth-like
IPR017866Succ-CoA_synthase_bsu_CS
IPR011761ATP-grasp