Ggra10542.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra10542.t1
Unique Name	Ggra10542.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	104

Homology

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BLAST of Ggra10542.t1 vs. uniprot
Match: A0A2V3IN90 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN90_9FLOR)

HSP 1 Score: 135 bits (339), Expect = 3.390e-39
Identity = 82/92 (89.13%), Postives = 85/92 (92.39%), Query Frame = 0

Query:    1 MVGGSTSSXXXXXXXXXXXXASETDGDTFDGDAEFDEYDDWDYAEMLSTMSKNLKTYVLQPLVVGAAAAFGMSVGFAIFDATTSIFIRRSPK 92
            MVG S+S XXXXXXXXXXXXASETDGDTFDGDAEFDEYDDWDYAEMLS MSKNLKTYVLQPLVVGAAAA GMS+GFAIFDAT SIF RRS +
Sbjct:    1 MVGNSSSXXXXXXXXXXXXXASETDGDTFDGDAEFDEYDDWDYAEMLSAMSKNLKTYVLQPLVVGAAAALGMSIGFAIFDATASIFTRRSTR 92

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BLAST of Ggra10542.t1 vs. uniprot
Match: R7Q3U8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3U8_CHOCR)

HSP 1 Score: 115 bits (288), Expect = 1.610e-31
Identity = 55/96 (57.29%), Postives = 71/96 (73.96%), Query Frame = 0

Query:    1 MVGGSTSSXXXXXXXXXXXXASETDGDTFDGDAEFDEYDDWDYAEMLSTMSKNLKTYVLQPLVVGAAAAFGMSVGFAIFDATTSIFIRRSPKVNSQ 96
            MVG  +SS            ASETDG+TFDG+A+FD+Y++WD+AEM ST SKN+K Y+ QP VVGAAAAFGMSVG+A+FDAT ++F R+ P   S+
Sbjct:    1 MVGAGSSSGSAAAGFYTAMPASETDGETFDGEADFDDYEEWDFAEMFSTASKNVKKYIFQPFVVGAAAAFGMSVGYAMFDATAAMFTRKGPSSKSR 96

The following BLAST results are available for this feature:

BLAST of Ggra10542.t1 vs. uniprot

BLAST of Ggra10542.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IN90	3.390e-39	89.13	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q3U8	1.610e-31	57.29	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..56
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 80..103
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 57..79
None	No IPR available	TMHMM	TMhelix		coord: 57..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000904_pilon	contig	tig00000904_pilon:63426..63946 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra10542.t1	Ggra10542.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000904_pilon 63426..63946 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra10542.t1 ID=Ggra10542.t1|Name=Ggra10542.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=104bp
MVGGSTSSAATAAGFYAAAAASETDGDTFDGDAEFDEYDDWDYAEMLSTM
SKNLKTYVLQPLVVGAAAAFGMSVGFAIFDATTSIFIRRSPKVNSQPPLH
KAN*