Ggra10535.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra10535.t1
Unique Name	Ggra10535.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	133

Homology

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BLAST of Ggra10535.t1 vs. uniprot
Match: A0A2V3IXB9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXB9_9FLOR)

HSP 1 Score: 102 bits (255), Expect = 1.330e-25
Identity = 62/131 (47.33%), Postives = 77/131 (58.78%), Query Frame = 0

Query:    1 MDFIGSYYVPSSDPFPTPRNAEPPVFHELPLPRGNPDEGLLEKIKNGDFSEVRKLRKMGERRKPTVRFVAPACHDKETLVDIALTPKHDEAELKSQENREEDKSGNKEKERAERDNRVSIFGIKFGRPHNR 131
            MDF+ SYYV S     +PR     VF +LP+     DE  LEK+KNGD+ EVR+ RKMGERRK  V FVA  C + E L  I+LTPK  + E       +E+    +EK  A  D RVSIFGI+ G+ H R
Sbjct:    1 MDFLSSYYVLSPGALYSPRCTHS-VFGDLPVRNRTRDEVQLEKMKNGDYKEVREHRKMGERRKTRVHFVASICEESERLESISLTPKRQDQEENPCNQGKEELHREEEKGNAAVDKRVSIFGIRIGKVHTR 130

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BLAST of Ggra10535.t1 vs. uniprot
Match: R7QL24 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL24_CHOCR)

HSP 1 Score: 65.5 bits (158), Expect = 7.140e-11
Identity = 48/140 (34.29%), Postives = 73/140 (52.14%), Query Frame = 0

Query:    1 MDFIGSYYVPSSDPFPTPRNAEPPVFHELPLPRGNPDEGLLEKIKNGDFSEVRKLRKMGERRKPTVRFVAPACHDKETLVDIALTPK------------HDEAELKSQENREEDKSGNKEKERAERDNRVS-IFGIKFGR 127
            MDF+GSY  PS   F TPR A    F +LP  R   +E  L+ + +G++ EVRK+R   E++K TV+F+AP   + ++L  + LTP+               + L S   ++ DKS  K  ++ +R+   S  FG  F R
Sbjct:    1 MDFLGSYIPPSPTKF-TPR-ANGNKFDDLPALRAPCNEEQLQNMMSGNYEEVRKIRSCLEKKKATVKFIAPLSEEGDSLQSVKLTPRVARTLNDNPRTPPPHSTLSSDPEKKLDKSDKKRSQQRKREKASSNYFGFSFRR 138

The following BLAST results are available for this feature:

BLAST of Ggra10535.t1 vs. uniprot

BLAST of Ggra10535.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IXB9	1.330e-25	47.33	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QL24	7.140e-11	34.29	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..132

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000904_pilon	contig	tig00000904_pilon:49886..50284 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra10535.t1	Ggra10535.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000904_pilon 49886..50284 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra10535.t1 ID=Ggra10535.t1|Name=Ggra10535.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=133bp
MDFIGSYYVPSSDPFPTPRNAEPPVFHELPLPRGNPDEGLLEKIKNGDFS
EVRKLRKMGERRKPTVRFVAPACHDKETLVDIALTPKHDEAELKSQENRE
EDKSGNKEKERAERDNRVSIFGIKFGRPHNRR*