Ggra623.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra623.t1
Unique NameGgra623.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length366
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000895_piloncontigtig00000895_pilon:109164..110261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra623Ggra623Gracilaria gracilis GNS1m malegenetig00000895_pilon 109164..110261 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra623.t1.start1Ggra623.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000895_pilon 109164..109166 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra623.t1.CDS1Ggra623.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000895_pilon 109164..110261 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra623.t1.exon1Ggra623.t1.exon1Gracilaria gracilis GNS1m maleexontig00000895_pilon 109164..110261 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra623.t1.stop1Ggra623.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000895_pilon 110259..110261 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra623.t1Ggra623.t1Gracilaria gracilis GNS1m malepolypeptidetig00000895_pilon 109164..110261 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra623.t1 ID=Ggra623.t1|Name=Ggra623.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=366bp
MVFISLNALPIALIVTFVLVAAELIAVSVLYIFLRFYETGVLQNGGSVSL
PRHRGRLRYLALVLMLGFVGLEALFSFSSDTAFEKLSRKHKCVSLVPRSE
NVSKQEDSEAHTQEADVILSKCRTWNGTSSFQALGNFSLVSSNVSCSDTS
LYSFNISQTVTKFLSNQKKECTERPIVGLKEFSPVCVFYDYVDGILFLST
TVHSDDDAETLEIEQEFLPTKLNYNASTSFIREVVRSVLQIYLSDVVMAD
DSALRRVSFTKIVQRECTFQVGTKEGTNVPVYVISIFSTIWVVLLLTLAW
TVCLSRKRDLVNLSDPVFWIENYEGSFLSKNVKVEISREGKKLSASGTPV
ALLPTHEHTAEGPKA*
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spliced messenger RNA

>Ggra623.t1 ID=Ggra623.t1|Name=Ggra623.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1098bp|location=Sequence derived from alignment at tig00000895_pilon:109164..110261+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTATTCATCTCACTCAACGCTCTGCCGATAGCTCTTATTGTTACTTT
TGTTCTCGTAGCCGCTGAGCTGATTGCAGTTTCTGTTCTCTATATTTTTC
TCCGCTTTTATGAAACGGGTGTACTTCAAAATGGGGGCTCAGTTTCCCTT
CCTCGCCACCGAGGGCGATTGAGATATCTTGCACTGGTATTGATGCTTGG
GTTCGTGGGCTTGGAAGCACTGTTCTCATTCTCTTCAGACACAGCGTTCG
AGAAACTTTCTCGGAAGCATAAATGCGTGTCTTTGGTTCCACGTTCGGAA
AATGTTAGCAAACAAGAAGATAGCGAAGCTCACACCCAGGAGGCGGATGT
AATCTTGTCCAAGTGTCGAACTTGGAACGGAACTTCGTCTTTTCAGGCTC
TGGGAAACTTTAGCTTGGTGTCATCCAATGTGTCTTGCTCTGATACTTCC
TTGTACAGTTTTAATATTTCCCAAACAGTGACGAAATTTCTGTCAAATCA
AAAGAAGGAATGTACAGAACGGCCTATCGTTGGACTTAAGGAATTCTCCC
CTGTATGTGTGTTCTATGATTATGTAGATGGTATTTTGTTTCTGAGCACA
ACTGTTCATTCAGATGATGATGCTGAAACCCTTGAAATAGAGCAAGAATT
CCTACCAACTAAGTTGAACTATAATGCATCCACATCTTTCATTCGCGAAG
TCGTTAGAAGTGTACTGCAAATCTACCTGTCTGACGTGGTCATGGCAGAT
GATTCAGCCCTGAGAAGGGTATCGTTCACCAAGATCGTGCAAAGAGAGTG
TACTTTTCAAGTCGGCACGAAGGAAGGCACCAACGTTCCAGTGTATGTAA
TTTCCATTTTTTCAACAATCTGGGTTGTACTGCTTCTTACTTTGGCATGG
ACCGTTTGCCTATCACGAAAACGAGATCTTGTCAATTTGAGTGACCCCGT
TTTCTGGATTGAAAACTATGAGGGTAGTTTTCTATCGAAGAATGTCAAGG
TGGAAATAAGCAGAGAGGGTAAAAAACTAAGCGCTTCAGGCACACCAGTG
GCGCTGCTACCTACGCATGAGCACACTGCTGAAGGGCCTAAGGCATGA
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protein sequence of Ggra623.t1

>Ggra623.t1 ID=Ggra623.t1|Name=Ggra623.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=366bp
MVFISLNALPIALIVTFVLVAAELIAVSVLYIFLRFYETGVLQNGGSVSL
PRHRGRLRYLALVLMLGFVGLEALFSFSSDTAFEKLSRKHKCVSLVPRSE
NVSKQEDSEAHTQEADVILSKCRTWNGTSSFQALGNFSLVSSNVSCSDTS
LYSFNISQTVTKFLSNQKKECTERPIVGLKEFSPVCVFYDYVDGILFLST
TVHSDDDAETLEIEQEFLPTKLNYNASTSFIREVVRSVLQIYLSDVVMAD
DSALRRVSFTKIVQRECTFQVGTKEGTNVPVYVISIFSTIWVVLLLTLAW
TVCLSRKRDLVNLSDPVFWIENYEGSFLSKNVKVEISREGKKLSASGTPV
ALLPTHEHTAEGPKA*
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mRNA from alignment at tig00000895_pilon:109164..110261+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra623.t1 ID=Ggra623.t1|Name=Ggra623.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1098bp|location=Sequence derived from alignment at tig00000895_pilon:109164..110261+ (Gracilaria gracilis GNS1m male)
ATGGTATTCATCTCACTCAACGCTCTGCCGATAGCTCTTATTGTTACTTT
TGTTCTCGTAGCCGCTGAGCTGATTGCAGTTTCTGTTCTCTATATTTTTC
TCCGCTTTTATGAAACGGGTGTACTTCAAAATGGGGGCTCAGTTTCCCTT
CCTCGCCACCGAGGGCGATTGAGATATCTTGCACTGGTATTGATGCTTGG
GTTCGTGGGCTTGGAAGCACTGTTCTCATTCTCTTCAGACACAGCGTTCG
AGAAACTTTCTCGGAAGCATAAATGCGTGTCTTTGGTTCCACGTTCGGAA
AATGTTAGCAAACAAGAAGATAGCGAAGCTCACACCCAGGAGGCGGATGT
AATCTTGTCCAAGTGTCGAACTTGGAACGGAACTTCGTCTTTTCAGGCTC
TGGGAAACTTTAGCTTGGTGTCATCCAATGTGTCTTGCTCTGATACTTCC
TTGTACAGTTTTAATATTTCCCAAACAGTGACGAAATTTCTGTCAAATCA
AAAGAAGGAATGTACAGAACGGCCTATCGTTGGACTTAAGGAATTCTCCC
CTGTATGTGTGTTCTATGATTATGTAGATGGTATTTTGTTTCTGAGCACA
ACTGTTCATTCAGATGATGATGCTGAAACCCTTGAAATAGAGCAAGAATT
CCTACCAACTAAGTTGAACTATAATGCATCCACATCTTTCATTCGCGAAG
TCGTTAGAAGTGTACTGCAAATCTACCTGTCTGACGTGGTCATGGCAGAT
GATTCAGCCCTGAGAAGGGTATCGTTCACCAAGATCGTGCAAAGAGAGTG
TACTTTTCAAGTCGGCACGAAGGAAGGCACCAACGTTCCAGTGTATGTAA
TTTCCATTTTTTCAACAATCTGGGTTGTACTGCTTCTTACTTTGGCATGG
ACCGTTTGCCTATCACGAAAACGAGATCTTGTCAATTTGAGTGACCCCGT
TTTCTGGATTGAAAACTATGAGGGTAGTTTTCTATCGAAGAATGTCAAGG
TGGAAATAAGCAGAGAGGGTAAAAAACTAAGCGCTTCAGGCACACCAGTG
GCGCTGCTACCTACGCATGAGCACACTGCTGAAGGGCCTAAGGCATGA
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Coding sequence (CDS) from alignment at tig00000895_pilon:109164..110261+

>Ggra623.t1 ID=Ggra623.t1|Name=Ggra623.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1098bp|location=Sequence derived from alignment at tig00000895_pilon:109164..110261+ (Gracilaria gracilis GNS1m male)
ATGGTATTCATCTCACTCAACGCTCTGCCGATAGCTCTTATTGTTACTTT
TGTTCTCGTAGCCGCTGAGCTGATTGCAGTTTCTGTTCTCTATATTTTTC
TCCGCTTTTATGAAACGGGTGTACTTCAAAATGGGGGCTCAGTTTCCCTT
CCTCGCCACCGAGGGCGATTGAGATATCTTGCACTGGTATTGATGCTTGG
GTTCGTGGGCTTGGAAGCACTGTTCTCATTCTCTTCAGACACAGCGTTCG
AGAAACTTTCTCGGAAGCATAAATGCGTGTCTTTGGTTCCACGTTCGGAA
AATGTTAGCAAACAAGAAGATAGCGAAGCTCACACCCAGGAGGCGGATGT
AATCTTGTCCAAGTGTCGAACTTGGAACGGAACTTCGTCTTTTCAGGCTC
TGGGAAACTTTAGCTTGGTGTCATCCAATGTGTCTTGCTCTGATACTTCC
TTGTACAGTTTTAATATTTCCCAAACAGTGACGAAATTTCTGTCAAATCA
AAAGAAGGAATGTACAGAACGGCCTATCGTTGGACTTAAGGAATTCTCCC
CTGTATGTGTGTTCTATGATTATGTAGATGGTATTTTGTTTCTGAGCACA
ACTGTTCATTCAGATGATGATGCTGAAACCCTTGAAATAGAGCAAGAATT
CCTACCAACTAAGTTGAACTATAATGCATCCACATCTTTCATTCGCGAAG
TCGTTAGAAGTGTACTGCAAATCTACCTGTCTGACGTGGTCATGGCAGAT
GATTCAGCCCTGAGAAGGGTATCGTTCACCAAGATCGTGCAAAGAGAGTG
TACTTTTCAAGTCGGCACGAAGGAAGGCACCAACGTTCCAGTGTATGTAA
TTTCCATTTTTTCAACAATCTGGGTTGTACTGCTTCTTACTTTGGCATGG
ACCGTTTGCCTATCACGAAAACGAGATCTTGTCAATTTGAGTGACCCCGT
TTTCTGGATTGAAAACTATGAGGGTAGTTTTCTATCGAAGAATGTCAAGG
TGGAAATAAGCAGAGAGGGTAAAAAACTAAGCGCTTCAGGCACACCAGTG
GCGCTGCTACCTACGCATGAGCACACTGCTGAAGGGCCTAAGGCATGA
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