Ggra10698.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10698.t1
Unique NameGgra10698.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length498
Homology
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BLAST of Ggra10698.t1 vs. uniprot
Match: A0A2V3IS94 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS94_9FLOR)

HSP 1 Score: 245 bits (625), Expect = 7.550e-72
Identity = 139/355 (39.15%), Postives = 212/355 (59.72%), Query Frame = 0 
Query:  134 GVPRPRVRRYRLIAPIIIRFTVLTLELGAIYFSSNITNDVCAGRSFNVRLTERDTP-----GNISSELCRTLIEDAKGIEQKGSVLLCMGRREER-ITSSKREGTKMYFFFSPSLNEVEFRVQDEFVVVTSVYVEVFLNLMNDANVQLAPLRPDLDVDDNYSKRILFDIMDRAMNKLGANVTINQIEEEVSQDGEIIYEYPRLFNEFSRDQISNALLREMQKLTLHLNVTQPGEEDVLYVFKPDRGYFRHENPQIAVVAKTRLAQGWFMIAWTSLLLTRLIAQLFFTTFDEVAYPAVKRIHGADLAIGPMARVEKRESLQISKFSDGTVGHIGYRKANDRQDHVENFYGCEIVLG 482
            GVP P++R  +L+ P++IRFT+L L+L AIY SS  T DV    +FN+ L+    P     GN  S  CR+ I+  +G+EQ G VLLC+   E R       + T ++F FSP  N  EF V+D   + + V+V+  ++ ++  NV +APLRPDL  D+  ++ ++  +M  A+ +    + ++ I      D  + Y Y    +   R ++SNA+L E++ L L +N T  G    +++F    GY   +   IAVV+  R+AQGWF+I W +LLLTRLIA  + + F+E+AY A+K++HG  +++GP+A  E R  + + KFSDG VGHIG+R A+ RQ  VE+F  CE+VLG
Sbjct:  121 GVPCPQLRYRKLLFPLLIRFTLLALQLFAIYSSSTTTRDVPVTPNFNLVLSNNTKPLPSPKGNFPS--CRSWIQSTRGVEQNGDVLLCIDSEESRRFEGQPSQNTTLHFLFSPDENRFEFIVRDHLAMESRVFVKAKISFLSGENVGVAPLRPDLTSDNGTAEELVKKVMVNALRRQRVEIRMDDIR--TFTDSNVTYNYSCSLDLCDRVKLSNAVLDELRTLKLDVNKTSTG----VWLFN-GTGYIFEDKKAIAVVSSNRVAQGWFLIIWVALLLTRLIANRWLSDFEELAYAALKKVHGERMSVGPLAVTEHRAPVFVRKFSDGRVGHIGFRPASPRQRVVESFQDCEVVLG 466
The following BLAST results are available for this feature:
BLAST of Ggra10698.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IS947.550e-7239.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..144
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 166..497
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000888_piloncontigtig00000888_pilon:447794..449287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10698.t1Ggra10698.t1Gracilaria gracilis GNS1m malemRNAtig00000888_pilon 447794..449287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10698.t1 ID=Ggra10698.t1|Name=Ggra10698.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=498bp
MRGMRQTISGLEYPPKEISTERPTKRRSGLLSGRWLSGGHCNHDDGERGE
RASSHRESSLWNSLFRPTQSQPAATRSPSFHQSLNGTADRATDPAIPARE
PGHDQSTSIEDEEGQDRPAKSQELRRIGVPVRDGVPRPRVRRYRLIAPII
IRFTVLTLELGAIYFSSNITNDVCAGRSFNVRLTERDTPGNISSELCRTL
IEDAKGIEQKGSVLLCMGRREERITSSKREGTKMYFFFSPSLNEVEFRVQ
DEFVVVTSVYVEVFLNLMNDANVQLAPLRPDLDVDDNYSKRILFDIMDRA
MNKLGANVTINQIEEEVSQDGEIIYEYPRLFNEFSRDQISNALLREMQKL
TLHLNVTQPGEEDVLYVFKPDRGYFRHENPQIAVVAKTRLAQGWFMIAWT
SLLLTRLIAQLFFTTFDEVAYPAVKRIHGADLAIGPMARVEKRESLQISK
FSDGTVGHIGYRKANDRQDHVENFYGCEIVLGRAEGVAKGGEESVGS*
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