Ggra10693.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10693.t1
Unique NameGgra10693.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length251
Homology
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BLAST of Ggra10693.t1 vs. uniprot
Match: R7Q6J5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6J5_CHOCR)

HSP 1 Score: 77.4 bits (189), Expect = 2.030e-13
Identity = 45/156 (28.85%), Postives = 86/156 (55.13%), Query Frame = 0 
Query:   65 RVTTTGISCRGICSVSMSYNVTINGVSSKYLNEKDSRFRSLLTDTQRTKYDNAKKRYKGGLGVTFLRAVGINLGGR-YSKGKVNELRERVENYESLAKEARNIMNSFERATVRVYGSMTVTSYTSVQSEAVAYVRSAKVTLTDGRELRVVGASRRD 219
            R +T G+S     + ++S+++T++G+S+  + +KD+ ++++LT + +  Y   K  YKGGL + F+  +G +L  R  + G++ + R   + +E        I+    RA V++ GS  VT  + +      YV+ A+VT TDG+ + +V    RD
Sbjct:   58 RASTFGVSVTRGATATISFSITLSGISAVEMAKKDAIYQNILTGSLKKTYMRRKNAYKGGLNLPFMADIGADLRRRKLNGGELRKSRVSKQLFERRLCAVSKILGGVRRARVQIRGSRRVTGTSLIPRTVYGYVKVARVTRTDGKTITIVSTDPRD 213
The following BLAST results are available for this feature:
BLAST of Ggra10693.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q6J52.030e-1328.85Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..173
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000888_piloncontigtig00000888_pilon:272634..273386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10693.t1Ggra10693.t1Gracilaria gracilis GNS1m malemRNAtig00000888_pilon 272634..273386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10693.t1 ID=Ggra10693.t1|Name=Ggra10693.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=251bp
MNTLRYLIGFLCIATLVNAMELEDLSKLDIVKSVQFEENTIRQTETSQSS
NSTDVVKTFKRSQGRVTTTGISCRGICSVSMSYNVTINGVSSKYLNEKDS
RFRSLLTDTQRTKYDNAKKRYKGGLGVTFLRAVGINLGGRYSKGKVNELR
ERVENYESLAKEARNIMNSFERATVRVYGSMTVTSYTSVQSEAVAYVRSA
KVTLTDGRELRVVGASRRDVRVVDSNTGEELDNEDWIGGADQETDNGDIF
*
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