Ggra10726.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10726.t1
Unique NameGgra10726.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length324
Homology
BLAST of Ggra10726.t1 vs. uniprot
Match: R7QFJ7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFJ7_CHOCR)

HSP 1 Score: 164 bits (414), Expect = 1.860e-44
Identity = 91/178 (51.12%), Postives = 117/178 (65.73%), Query Frame = 0
Query:    1 MFGCVADVSDEQQVAKLAEFARHNLPSVEAFICNASTVGKRAALRDAQPDDLRNVVATPLLGSLFCAKKAVRIADGQQRRVYVFVMDGSGT-------IAAQDAQKK----ISAAFC--------HFHCLSPGMVLTDLLLGENVERSSRRIFNFLAEKPHTVAEYLVSRMRSALTSD 159
            +FGCVADVS    VA+LA+FA  NL ++  FICNA T G R  +RDA+ +DL NVV+T LLG + CAK+A R+A  Q + ++VF+MDGSG+        AA  A K+    + A+           FH LSPGMVLTDLLL EN E  +R++FNFLAE+P TVAE LV R+RS + SD
Sbjct:   98 VFGCVADVSKHLDVARLADFASENLGTINTFICNAGTTGPRGPIRDAEANDLANVVSTNLLGPMLCAKEAWRVAKNQSQPLHVFIMDGSGSRGNTTPNYAAYGATKRSIPQLVASLAIEGKGDPVRFHTLSPGMVLTDLLLAENQEPIARKVFNFLAEEPETVAENLVPRIRSVVRSD 275          
BLAST of Ggra10726.t1 vs. uniprot
Match: A0A2V3IUQ3 (Chlorophyll(Ide) b reductase NOL, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUQ3_9FLOR)

HSP 1 Score: 154 bits (389), Expect = 3.260e-41
Identity = 84/179 (46.93%), Postives = 114/179 (63.69%), Query Frame = 0
Query:    1 MFGCVADVSDEQQVAKLAEFARHNLPSVEAFICNASTVGKRAALRDAQPDDLRNVVATPLLGSLFCAKKAVRIADGQQRRVYVFVMDGSGTIAAQDAQ-------------------KKISAAFCHFHCLSPGMVLTDLLLGENVERSSRRIFNFLAEKPHTVAEYLVSRMRSALTSDQ 160
            +FGCVADVS  + V +L EFA   L SV+AFICNA TVG R+++ +A    L +VV T LLGS++CAK+A+R+ + QQ+ ++VF++DGSGT+    A                    K+ +     FHCLSPGMVLT+LLL  N E   R+IFNFLAE+  TVA+ LV R+RS +  D+
Sbjct:   58 VFGCVADVSKHEDVRRLCEFASVKLGSVDAFICNAGTVGGRSSVVNAPAALLESVVTTNLLGSVYCAKEAIRLGEQQQKPMHVFLVDGSGTMGNATANYAAYGATKRAVPQLVKSLNKECAQGMTRFHCLSPGMVLTELLLAGNGEGRFRKIFNFLAEEAETVADELVPRLRSVVVDDE 236          
BLAST of Ggra10726.t1 vs. uniprot
Match: A0A383VKF8 (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VKF8_TETOB)

HSP 1 Score: 113 bits (282), Expect = 1.130e-24
Identity = 69/179 (38.55%), Postives = 100/179 (55.87%), Query Frame = 0
Query:    3 GCVADVSDEQQVAKLAEFARHNLPSVEAFICNASTVGKRAALRDAQPDDLRNVVATPLLGSLFCAKKAVRIADGQQRRVYVFVMDGSGT-------IAAQDAQK------------KISAAFCHFHCLSPGMVLTDLLLGENVERSSRRIFNFLAEKPHTVAEYLVSRMRSALTSDQGG 162
            G V DV+  QQV  LAE AR  + SV+ +ICNA   G      D +P+ +  VV T LLG+L C+++A ++  GQQ   ++F+MDG+G         AA  A K            ++++     H LSPGM+LT+LLL E    ++++ FN L E P TVA +LV R+RSA++    G
Sbjct:  160 GIVCDVTQPQQVVALAEQAREMMGSVDVWICNAGYSGSFKHFLDQEPETIEAVVKTNLLGTLLCSREAAKLMLGQQLGGHIFIMDGAGADGSATPQYAAYGATKASFPQLAASLRAELASTHVGVHVLSPGMMLTELLL-EGATAANKQAFNILCEHPETVAAFLVPRVRSAVSCGLNG 337          
BLAST of Ggra10726.t1 vs. uniprot
Match: A0A0G4G845 (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G845_VITBC)

HSP 1 Score: 112 bits (279), Expect = 1.140e-24
Identity = 72/174 (41.38%), Postives = 97/174 (55.75%), Query Frame = 0
Query:    3 GCVADVSDEQQVAKLAEFARHNLPSVEAFICNASTV-GKRAALRDAQPDDLRNVVATPLLGSLFCAKKAVRIADGQQRRVYVFVMDGSGT-------IAAQDAQKK----ISAAFCH-----------FHCLSPGMVLTDLLLGENVERSSRRIFNFLAEKPHTVAEYLVSRMR 153
            G + DV   Q V +L +F    L  ++ ++ NA TV GKR  L D  PDDL+ V+ T LLG+L C KKA+ I   Q++  ++F MDG+G         AA  A K+    +SA+               H LSPGMVLTDLLL ++   + RR FN L E+P TVA+YLV R+R
Sbjct:  107 GILCDVGSPQDVERLGDFCVEQLGHIDVWVNNAGTVAGKRRRLSDLTPDDLKQVLDTNLLGTLLCCKKAIEIMSRQEQGGHIFNMDGAGVEGGATKGYAAYGASKRAMPQLSASIREELKEANHNKIGVHNLSPGMVLTDLLLADSTP-AFRRFFNTLCEEPDTVADYLVPRIR 279          
BLAST of Ggra10726.t1 vs. uniprot
Match: A0A7J7QH51 (Chlorophyll b reductase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QH51_9CHLO)

HSP 1 Score: 108 bits (271), Expect = 6.210e-23
Identity = 68/179 (37.99%), Postives = 99/179 (55.31%), Query Frame = 0
Query:    3 GCVADVSDEQQVAKLAEFARHNLPSVEAFICNASTVGKRAALRDAQPDDLRNVVATPLLGSLFCAKKAVRIADGQQRRVYVFVMDGSGT-------IAAQDAQK------------KISAAFCHFHCLSPGMVLTDLLLGENVERSSRRIFNFLAEKPHTVAEYLVSRMRSALTSDQGG 162
            G V DV+  +QVA LA  AR  L +V+ +ICNA   G      + +P  +  VV T LLG+L C+++A R+  GQQ   ++F+MDG+G         AA  A K            ++++     H LSPGM+LT+LLL E    ++++ FN L E P TVA +LV R+RSA++    G
Sbjct:  220 GVVCDVTQPEQVAALAAQARQLLGTVDVWICNAGYSGSFKHFLEQEPGTIEAVVRTNLLGTLLCSREAARLMLGQQLGGHIFIMDGAGADGSATPQYAAYGATKASFPQLAASLRAELASTHVGVHVLSPGMMLTELLL-EGATTANKQAFNILCEHPETVAAFLVPRVRSAVSCGLNG 397          
BLAST of Ggra10726.t1 vs. uniprot
Match: A0A5J4Y6H3 (Putative chlorophyll(Ide) b reductase chloroplastic-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y6H3_9CHLO)

HSP 1 Score: 102 bits (254), Expect = 1.520e-20
Identity = 64/173 (36.99%), Postives = 93/173 (53.76%), Query Frame = 0
Query:    3 GCVADVSDEQQVAKLAEFARHNLPSVEAFICNASTVGKRAALRDAQPDDLRNVVATPLLGSLFCAKKAVRIADGQQRRVYVFVMDGSGT-------IAAQDAQK------------KISAAFCHFHCLSPGMVLTDLLLGENVERSSRRIFNFLAEKPHTVAEYLVSRMRSAL 156
            G   DVS    VA+LA  A+  L  ++ +I NA   G   A  D+ P+ L+ VV+T ++G+L C + A+++   Q    ++F MDG+G         AA  A K            + S+     H LSPGMVLTDLLL E   + +++IFN L E+P TVA YLV R+R+ +
Sbjct:  273 GTDCDVSSSASVARLASCAKSKLGRIDVWINNAGYSGSFQAFSDSSPEQLQQVVSTNMVGTLLCTRAAMQVMQKQTSGGHIFNMDGAGADGMPTPQYAAYGATKAGIAHLMGSLKAEASSKTVGVHTLSPGMVLTDLLL-EGATQENKQIFNILCEQPETVAAYLVPRVRTVV 444          
BLAST of Ggra10726.t1 vs. uniprot
Match: A0A5B9D7S5 (3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Candidatus Prometheoarchaeum syntrophicum TaxID=2594042 RepID=A0A5B9D7S5_9ARCH)

HSP 1 Score: 97.4 bits (241), Expect = 5.710e-20
Identity = 60/174 (34.48%), Postives = 92/174 (52.87%), Query Frame = 0
Query:    1 MFGCVADVSDEQQVAKLAEFARHNLPSVEAFICNASTVG-KRAALRDAQPDDLRNVVATPLLGSLFCAKKAVRIADGQQRRVYVFVMDGSGTIAAQDAQKKISAAF-------------------CHFHCLSPGMVLTDLLLGENVERSSRRIFNFLAEKPHTVAEYLVSRMRS 154
            +FG   DV+D QQV  L  FA   L  ++ +I NA T G KR  L + +   ++ V+ T +LG+L+C +  ++    Q    ++F M+G G+     A+  + A                        H LSPGMVLTDLLL +  +  +++++N LAEKP TVAEYLV ++R+
Sbjct:   53 VFGFECDVTDAQQVDALLNFAIDKLGKIDIWINNAGTAGDKRRLLVEVETSQIKRVIETNILGTLYCCRAVLKTMISQGSG-HIFNMEGMGSDGRTYAKSLVYATSKSAIPMIQKTLLLETKGLPVGIHDLSPGMVLTDLLLKDEPDLQTKKVYNILAEKPETVAEYLVPKIRN 225          
BLAST of Ggra10726.t1 vs. uniprot
Match: A0A7S1XE29 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XE29_9RHOD)

HSP 1 Score: 97.8 bits (242), Expect = 1.340e-19
Identity = 66/176 (37.50%), Postives = 98/176 (55.68%), Query Frame = 0
Query:    1 MFGCVADVSDEQQVAKLAEFARHNLPS-VEAFICNASTV-GKRAALRDAQPDDLRNVVATPLLGSLFCAKKAVRIADGQQRRV-YVFVMDGSGTI-------AAQDAQKK------------ISAAFCHFHCLSPGMVLTDLLLGENVERSSRRIFNFLAEKPHTVAEYLVSRMRS 154
            ++G   DV D + VA L +F+   L   V+ ++ NA TV GKR  L +  PDD+  V+ T L+G++ C ++A+     Q+    ++F+MDG+G +       AA  A K+            +       H LSPGMVLTDLLL ++  +  R+ FNFLAE+P TVA+ LV R+RS
Sbjct:  103 VYGTTCDVRDAESVAALRQFSEMVLGGRVDVWVNNAGTVAGKRRPLMELDPDDVDEVIRTNLVGTMLCCREAMLGMTAQEPPGGHIFLMDGAGVLGGATPGYAAYGATKRAIPQLRKTLAEEVKGIPIGIHNLSPGMVLTDLLLSDST-KEFRKFFNFLAEEPETVAKDLVPRIRS 277          
BLAST of Ggra10726.t1 vs. uniprot
Match: I0ZAL1 (NAD(P)-binding protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZAL1_COCSC)

HSP 1 Score: 96.7 bits (239), Expect = 4.000e-19
Identity = 65/184 (35.33%), Postives = 91/184 (49.46%), Query Frame = 0
Query:    3 GCVADVSDEQQVAKLAEFARHNLPSVEAFICNASTVGKRAALRDAQPDDLRNVVATPLLGSLFCAKKAVRIADGQQRRVYVFVMDGSGT-------IAAQDAQKKISAAFCHF-----------------HCLSPGMVLTDLLLGENVERSSRRIFNFLAEKPHTVAEYLVSRMRSALTSDQGG 162
            G   DVS    V +L + A   + S++ +I NA   G   +  +A+P+ ++ VV T LLG L C + A+R+   Q R  ++F MDG+G         AA  A K   A   H                  HCLSPGMVLT+LLL E     +++IFN L E+P TVA +LV R R+     + G
Sbjct:   89 GIDCDVSSPASVQRLVDGAASQMGSIDVWINNAGYSGTFQSFIEARPEQIQEVVQTNLLGCLLCTRAAMRLMAAQPRGGHIFNMDGAGADGLPTPQYAAYGATK---AGIAHLKGSLGAEAAREGAPVGVHCLSPGMVLTNLLL-EGASDINKQIFNILCEQPETVAAFLVPRARTVAARGEAG 268          
BLAST of Ggra10726.t1 vs. uniprot
Match: A0A150GT97 (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GT97_GONPE)

HSP 1 Score: 96.7 bits (239), Expect = 7.920e-19
Identity = 64/181 (35.36%), Postives = 91/181 (50.28%), Query Frame = 0
Query:    1 MFGCVADVSDEQQVAKLAEFARHNLPSVEAFICNASTVGKRAALRDAQPDDLRNVVATPLLGSLFCAKKAVRIADGQQRRVYVFVMDGSGT-------IAAQDAQK------------KISAAFCHFHCLSPGMVLTDLLLGENVERSSRRIFNFLAEKPHTVAEYLVSRMRSALTSDQGG 162
            +FG  ADVSD   VA +   A      V+A++ NA   G    + D   + +  VV T LLG+L C ++A+R+   Q    +VF MDG+G         AA  A K            ++       H +SPGM+LTDLLL E    ++++ FN L E+P T A +LV R+RSA+  D  G
Sbjct:  151 IFGVAADVSDAAGVAAVEAAAVAAFGRVDAWVNNAGYSGSFQTMTDQTDEQVAQVVRTNLLGTLLCTRQALRLFASQPGGGHVFNMDGAGADGFATPNYAAYGATKAGIAHLTATLRRELEGTPVRLHTVSPGMILTDLLL-EGATTANKQAFNILCEQPETTAAFLVPRIRSAIARDANG 330          
The following BLAST results are available for this feature:
BLAST of Ggra10726.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QFJ71.860e-4451.12Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IUQ33.260e-4146.93Chlorophyll(Ide) b reductase NOL, chloroplastic n=... [more]
A0A383VKF81.130e-2438.55Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A0G4G8451.140e-2441.38Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7J7QH516.210e-2337.99Chlorophyll b reductase n=1 Tax=Scenedesmus sp. NR... [more]
A0A5J4Y6H31.520e-2036.99Putative chlorophyll(Ide) b reductase chloroplasti... [more]
A0A5B9D7S55.710e-2034.483-ketoacyl-(Acyl-carrier-protein) reductase n=1 Ta... [more]
A0A7S1XE291.340e-1937.50Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
I0ZAL14.000e-1935.33NAD(P)-binding protein (Fragment) n=1 Tax=Coccomyx... [more]
A0A150GT977.920e-1935.36Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 2..163
e-value: 3.8E-12
score: 48.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..176
NoneNo IPR availablePANTHERPTHR24314NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATEDcoord: 1..178
NoneNo IPR availableCDDcd05233SDR_ccoord: 5..157
e-value: 3.15656E-10
score: 57.2936
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 4..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000888_piloncontigtig00000888_pilon:911211..921788 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10726.t1Ggra10726.t1Gracilaria gracilis GNS1m malemRNAtig00000888_pilon 911211..921788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10726.t1 ID=Ggra10726.t1|Name=Ggra10726.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=324bp
MFGCVADVSDEQQVAKLAEFARHNLPSVEAFICNASTVGKRAALRDAQPD
DLRNVVATPLLGSLFCAKKAVRIADGQQRRVYVFVMDGSGTIAAQDAQKK
ISAAFCHFHCLSPGMVLTDLLLGENVERSSRRIFNFLAEKPHTVAEYLVS
RMRSALTSDQGGNQQFSQATNEESALRCQNPHDEEVAVGGELSDDAQHEH
SRNARGRKMACSEICDHDEEKGEQESDLGERWICRRAPKKRMYEETNNSV
DGEDYDLSDVHEPVRPRRLSKKRPRHRNISTISASKLPARHVMDDDIELS
DDSDTKAQERRAARRNRKVIRLA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf