Ggra9370.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9370.t1
Unique NameGgra9370.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length320
Homology
BLAST of Ggra9370.t1 vs. uniprot
Match: R7QIL8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIL8_CHOCR)

HSP 1 Score: 249 bits (637), Expect = 1.600e-77
Identity = 137/288 (47.57%), Postives = 186/288 (64.58%), Query Frame = 0
Query:   40 VVASLAFDSTTITSFTEQIKGEWTGYEGNFCPHTGKAVPVPDYYIPEEFSQWGLTPLGFESNHSITVRSDKLYRKFFRVLPSVSLFADHVDTEEDFR-CDTIGD-GLTVYSDGSFVNGNKKLPTKK-SKLERPPRIEFRLPHPYQQ-KQAANLTLHVDFESATIVQDIRAIVEKWSCIYCDGADMEGSSGYIEGWVAGAPGNAQDLTGRWLR---GDK-LFEREQASQREGGYVFLPEGLDVAFEERADGGRIARAAWRVSDR-RVALQRIFDTEGNVVSTERFVEQR 318
            V A+   D++ + SF E+I+GEW GYEGNF   TG    VPDYYIP++F +WG+ PLGFES HS+ VR  KLYRKFFRVLPSVSLFADHVD EEDF+  D   + G  V+ DGSF  G +K+  K+ S L++ P  E  L  P +  + A ++ L  DFE   +V  +RA+VEKWSC+YCDGA++EGSSG+++GWV+  P +   L G W     GD+ + +R         ++FLP G+DVA  E  DG  + +  W V +  RV ++R F  +G+VVS++R VE R
Sbjct:   69 VRANEPHDNSILESFAEKIRGEWDGYEGNFDSGTGAPEAVPDYYIPDQFVEWGIVPLGFESTHSVIVRGTKLYRKFFRVLPSVSLFADHVDLEEDFQQLDIAAEAGAHVFPDGSFATGPEKVCIKRESLLDKWPMAEMCLHDPREDVRNALHVKLKFDFEKRELVDSLRAVVEKWSCVYCDGANIEGSSGFVKGWVSDDPSHPSALAGSWKAVSAGDEQIVDRAAPQSVPSKHLFLPNGIDVAVLE-GDGVHV-QVGWLVDEATRVVMRRSFGQDGSVVSSQRIVEHR 354          
BLAST of Ggra9370.t1 vs. uniprot
Match: A0A5J4YT90 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT90_PORPP)

HSP 1 Score: 135 bits (339), Expect = 8.130e-33
Identity = 75/239 (31.38%), Postives = 122/239 (51.05%), Query Frame = 0
Query:   44 LAFDSTTITSFTEQIKGEWTGYEGNFCPHTGKAVPVPDYYIPEEFSQWGLTPLGFESNHSITVRSDKLYRKFFRVLPSVSLFADHVDTEED-FRCDTIGDGLTVYSDGSFVNGNKKLPTKKSKLERPPRIEFRLPHPYQQKQAANLTLHVDFESAT--IVQDIRAIVEKWSCIYCDGADMEGSSGYIEGWVAGAPGNAQDLTGRW--LRGDKLFEREQASQREGGYVFLPEGLDVAFEE 277
            +A  + ++  F    +GEW GYE  F   TG+   + +Y +P+ F + G+ P+GFES++S TVR   LYRK FR+LPS+  F DH+D EED +  D        + DGS+  G+ K   +      P +IEF L +P + +    +T+     +    IV D +  +E +   YC G  ++G SG+ +GW +    +   L G W  L+   L ER+         + +P G+ ++ E+
Sbjct:  131 VAAHAASVNLFAASYRGEWAGYECVFGKKTGEIQVLEEYELPDGFRELGVIPVGFESSNSCTVRGSMLYRKHFRILPSLCTFGDHIDIEEDLYAADLSEPHCVAFLDGSYSLGHAKHDPEAPTYVSPKKIEFGLMYPGESQTRQRITVRFGIHAGVGKIVSDPQVFLEHFEMDYCGGQVIQGGSGFTQGWGSEPLRDMSILDGTWKSLKDGTLVERKAPILDPQATLVMPHGITISIEK 369          
BLAST of Ggra9370.t1 vs. uniprot
Match: A0A2V3J686 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J686_9FLOR)

HSP 1 Score: 108 bits (269), Expect = 2.340e-23
Identity = 90/318 (28.30%), Postives = 137/318 (43.08%), Query Frame = 0
Query:   13 PVSTPTRSLPLPSKSASCIRPPARRTTVVASLAFDSTTITSFTEQIKGEWTGYEGNFCPHTGKAVPVPDYYIPEEFSQWGLTPLGFESNHSITVRSDKLYRKFFRVLPSVSLFADHVDTEEDFRCDTIGDGLTVYSDGSFVNGNKKLPTKKSKLERPPRIEFRLPHPYQQKQAANLTLHVDFESATIVQDIRAIVEKWSCIYCDGADMEGSSGYIEGWVAGAPGNAQDLTGRW---------LRGDKLFEREQASQRE---GGYVFLPEGLDVAFEERADGGRIARAAWRVSDRRVALQRIFDTEGNVVSTERFVEQR 318
            PV+  +  LPL S+S               S  F ++ + S    I+GEW G+EG F P  GKA+P+PD Y+P+EF +WG+ P GF+   S  ++   LY K  R LPSV   AD V  E        G+G   +SDG    G                +EF     +         + + F+    + ++  I+EKW   +CDG  + G  G  + +V  A  + +DL G W              + E   +  RE   G  + LP GL V   E      +  + W   + R  + R+++ EGN+V   +  E+R
Sbjct:   61 PVADSSEELPLSSESLG------------TSYGFLNSELVS---AIEGEWFGFEGTFGPD-GKALPIPDRYVPDEFREWGVAPSGFDVVTSSRLKEGVLYVKRTRALPSVGCEADAVVPEVSISTYE-GEGNVGFSDGCVSCGP---------------VEFGNAPSFTILTRGKQRVRLGFKVDAAIGNVTIILEKWGQEFCDGQVLPGCGGG-DRFVEEASSHVEDLLGAWDFDAEDVDICNQSGIQESSGSLNREKIEGHILLLPRGLSVRLVEEGKSV-LVESGWLCENTRTVVARLYE-EGNLVKVSKRFERR 343          
BLAST of Ggra9370.t1 vs. uniprot
Match: A0A7S0ZGT9 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGT9_9RHOD)

HSP 1 Score: 99.8 bits (247), Expect = 3.990e-21
Identity = 47/165 (28.48%), Postives = 90/165 (54.55%), Query Frame = 0
Query:   51 ITSFTEQIKGEWTGYEGNFCPHTGKAVPVPDYYIPEEFSQWGLTPLGFESNHSITVRSDKLYRKFFRVLPSVSLFADHVDTEEDFRCDTIGDGLTVYS--DGSFVNGNKKLPTKKSKLERPPRIEFRLPHPYQQK----QAANLTLHVDFESATIVQDIRAIVEK 209
            ++ F + + G+W+G+E +F       + +    IP+EF +WG+ P G+E +HS+ VR  K+ RK +RVLPSV +F +H+D EE+     + +    Y+  DG +  G + LP ++   ++  +++F +P  +       +   + + +D +   I  D++  VEK
Sbjct:   70 VSKFADLVSGDWSGFESSFSRTDASVITLESVDIPDEFREWGMIPKGYEFSHSVCVRDSKIIRKLYRVLPSVCVFGEHIDVEEEKYKFDLQNKTENYAFLDGGYSAGPQTLPLEQPGYKQAQKLDFCIPKFFDSDGFCDERVLVRVGIDMQRECIGSDVQVFVEK 234          
The following BLAST results are available for this feature:
BLAST of Ggra9370.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
R7QIL81.600e-7747.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YT908.130e-3331.38Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A2V3J6862.340e-2328.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0ZGT93.990e-2128.48Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:112427..113386 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9370.t1Ggra9370.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 112427..113386 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9370.t1 ID=Ggra9370.t1|Name=Ggra9370.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=320bp
MTLLAFVPRLPTPVSTPTRSLPLPSKSASCIRPPARRTTVVASLAFDSTT
ITSFTEQIKGEWTGYEGNFCPHTGKAVPVPDYYIPEEFSQWGLTPLGFES
NHSITVRSDKLYRKFFRVLPSVSLFADHVDTEEDFRCDTIGDGLTVYSDG
SFVNGNKKLPTKKSKLERPPRIEFRLPHPYQQKQAANLTLHVDFESATIV
QDIRAIVEKWSCIYCDGADMEGSSGYIEGWVAGAPGNAQDLTGRWLRGDK
LFEREQASQREGGYVFLPEGLDVAFEERADGGRIARAAWRVSDRRVALQR
IFDTEGNVVSTERFVEQRQ*
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