Ggra9404.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9404.t1
Unique NameGgra9404.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length370
Homology
BLAST of Ggra9404.t1 vs. uniprot
Match: A0A2V3ITS1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITS1_9FLOR)

HSP 1 Score: 343 bits (879), Expect = 6.860e-104
Identity = 175/296 (59.12%), Postives = 223/296 (75.34%), Query Frame = 0
Query:   78 AFFARADGIVDLEIDGNALYTLTQNRLIAVYDISAGASCVATVNAKQEAKSANFSVPSNDREFVSIHAVSPIASNSVQLVLVTSFGKQIYYSVSGASARLDRFTANSKIKPKTLRYVSFRPSPDKNIETTRPCVHMAWCENGAAVLADLRENKSDRLITIFPDAELTAAGLSGPKTRPSTMKTAEVVFDVSFGSSDESSSFNKVD---TPVATRRGYNGFRSRQKAPKRTFAISRTAPDSQTGVRECHEAVKDXXEAPNLFWVLTSTAMHLYER-----EFNQLITCGKFYHLAVD 365
            AFFAR+DGIVDL I+ +ALYTL+QN +++VYDIS+GA+CV  V+ KQEAKS  FSVPSNDREFVSIHAV    SNSVQL++VTSFG++IYYSV GAS+RLDR   + + KPKTLRY+SFRPSPDKNI+T+RPC+H+AWCENGA+VLADLREN+ DRLIT+FPDA LTA GL   + R + MKTAEVVF++S G+SDES+ +   +   TP   + GY+ F +RQ+ PKRTFAI+   P+ ++    C        EAP+ FWVLTS++MHLYER        +L++ G   H  +D
Sbjct:  243 AFFARSDGIVDLAIEDDALYTLSQNGILSVYDISSGANCVTRVDVKQEAKSVIFSVPSNDREFVSIHAVPSATSNSVQLIVVTSFGERIYYSVYGASSRLDRSMTHPRTKPKTLRYLSFRPSPDKNIKTSRPCIHIAWCENGASVLADLRENEPDRLITVFPDASLTAVGLPNSEVRQAAMKTAEVVFEISLGASDESTPYVSTENAGTPGTNQNGYDRFGNRQRPPKRTFAIAGICPELRSEETNC-------GEAPSSFWVLTSSSMHLYERIQPINRLRELLSSGGGSHSDID 531          
BLAST of Ggra9404.t1 vs. uniprot
Match: R7QG45 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG45_CHOCR)

HSP 1 Score: 211 bits (536), Expect = 4.360e-57
Identity = 153/458 (33.41%), Postives = 227/458 (49.56%), Query Frame = 0
Query:    1 MGLFPRINRAWLTIDSKLFLWAY--ASSPSQGVANDLFVFEELSQIIVSVALVPPRQGIFVESARYLVAVATTVEVTLLA------------------------------------------------------------------------------------------FFARADGIVDLEIDGN--ALYTLTQNRLIAVYDISAGASC--VATVNAKQEAKS-ANFSVPSNDREFVSIHAVSPIASNSVQLVLVTSFGKQIYYSVSGASARLDRFTANSK-----IKPKTLRYVSFRPSPDKNIE-TTRPCVHMAWCENGAAVLADLRENKSDRLITIFPDAELTAAGLSGPK-TRPSTMKTAEVVFDV---SFGSSDESSSFNKVDTPVATRRGYNGFRSRQKAPK-RTFAISRTAPDSQTGVRECHEAVKDXX--EAPNLFWVLTSTAMHLYER 348
            MGLFP++  AWLT+DS LFLW+Y  A   +    +DL+V+E + Q+IVSVA+V PR G+FV+S ++LVAVAT+ +VTLL                                                                                            FA+ D +VD+  D +  ALYTL+Q+  + VY+I    S   V TVN   E+++  +FS P+ +RE+VS+H V      SV +++VTSFG++IY+S + +++   +  +  +      +P+TL  V  RPSPD+ I  +TRPCVH AWCE GAAV ADLR    DRLI + PD++L  A LS P+ +RP T+++ EVV +V       +       ++ TP  +R   +G     +AP+ RTFAI+    D+  G         D    + P  F VL++TA+++YER
Sbjct:   77 MGLFPQLQCAWLTVDSNLFLWSYDLADPAAPSRPSDLYVYEGIHQVIVSVAVVSPRPGVFVDSVKWLVAVATSADVTLLGVEFSPAGEINLVPTHISIATDNILMLKIVSTPDGRIFMAGADGSLHEFVYQSNPRSGFFDLLSGRPVKRARKVVHSKSSLVDYFPSYLKTIFAKRDELVDIVADASRAALYTLSQSGSLTVYNIQNPTSTIHVCTVNVAHESRNLVSFSAPAGEREYVSLHVVPASCLVSVHVIVVTSFGERIYFSAAASASSSAQSASRMRNDFAATRPRTLTCVGCRPSPDRTISRSTRPCVHNAWCERGAAVFADLRPANVDRLIVVHPDSQLATA-LSEPRGSRPGTVRSKEVVMEVLLDEVSGAQSGGGGERMSTPFGSRPEMDGGGGDAQAPENRTFAIA----DASAGDPADRNLSMDPVPFDPPGSFLVLSATALYVYER 529          
BLAST of Ggra9404.t1 vs. uniprot
Match: M7BDQ9 (Uncharacterized protein n=1 Tax=Chelonia mydas TaxID=8469 RepID=M7BDQ9_CHEMY)

HSP 1 Score: 102 bits (254), Expect = 6.010e-20
Identity = 85/257 (33.07%), Postives = 121/257 (47.08%), Query Frame = 0
Query:    1 MGLFPRINRAWLTIDSKLFLWAYASSPSQGVANDLFVFEELSQIIVSVALVPPRQGIFVESARYLVAVATTVEVTLLAFF---ARADGIVDLEIDG--NALYTLTQNRLIAVYDISA---GASCVATVNAKQEAKSANFSVPSNDRE----FVSIHAVSPIASNSVQLVLVTSFGKQIYYSVSGASARLDRFTANSKIKPKTLRYVSFRPSPD----KNIETTRPCVHMAWCENGAAVLADLRENKSDRLITIFPDA 241
            MG+FP I+RAWLTIDS +F+W Y          DL  F+ LS+ I++V LV P+ GIF    RYL+ +AT V++ +L       +AD IV + ID   N LYT ++  +I VYD+     G + VA+V+      +A     + DR      V I  +    S   QL+ VT  G ++Y+S S     + R        P  L  V  R  P      N+E     VH A    G  ++A      +D L  I  D+
Sbjct:   99 MGVFPDISRAWLTIDSDIFMWNYEDG------GDLAYFDGLSETILAVGLVKPKAGIFQPHVRYLLVLATPVDIVILGLSYANLQADPIVQIAIDNSRNILYTRSEKGVIQVYDLGQDGQGMTRVASVSQNAVVSAAGNIARTIDRSVFKPIVQIAVIENSESIDCQLLAVTHAGVRMYFSTSPFKHPMAR--------PSMLTLVHIRLPPGFSAASNVEKPSK-VHRALYSKGVLLMAASENEDNDILWCINHDS 340          
BLAST of Ggra9404.t1 vs. uniprot
Match: nuclear pore complex protein Nup155-like n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FE4B1 (nuclear pore complex protein Nup155-like n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FE4B1)

HSP 1 Score: 96.7 bits (239), Expect = 2.150e-18
Identity = 79/264 (29.92%), Postives = 128/264 (48.48%), Query Frame = 0
Query:    1 MGLFPRINRAWLTIDSKLFLWAYASSPSQGVANDLFVFEELSQIIVSVALVPPRQGIFVESARYLVAVATTVEVTLLA--FFARADG------IVDLEIDG--NALYTLTQNRLIAVYDISA---GASCVATVN----AKQEAKSANFSVPSNDREFVSIHAVSPIASNSVQLVLVTSFGKQIYY------SVSGASARLDRFTANSKIKPKTLRYVSFRPSPDKNIETTRPC-VHMAWCENGAAVLADLRENKSDRLITIFPD 240
            MGLFP I RAWLT+DS +F+W Y         +DL  F+ LS+ I+   LV P+  I  +S +Y++ + T V++ LLA  F  R+ G      +  L +D   N LY+ ++   I V+D+ A   G S VA++     A + A +   +  SN +  V I  VS   S+ +QLV +T  G ++Y+       ++G  +RL+            L ++   P    +  + RP  VH ++   G  +L+  +   +D L  I  D
Sbjct:  102 MGLFPEIRRAWLTVDSDIFVWNYEDG------SDLAYFDGLSETILCAGLVKPKPEILRDSVKYVLCLTTPVDIVLLAVTFTPRSRGAFIPDPLCQLAVDNTRNILYSRSEKGTIQVFDLGADGCGMSYVASLTQDSIAHKAASATRTADYSNFKPIVHIAPVSQSESSYIQLVAITQAGVRLYFCTVPSREINGRPSRLN------------LVHIRMPPGFAPSATSLRPSQVHASFYRQGMTILSSAQTEDTDVLWAISSD 347          
BLAST of Ggra9404.t1 vs. uniprot
Match: A0A7S1Y049 (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y049_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 5.190e-17
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 0
Query:    1 MGLFPRINRAWLTIDSKLFLWAYASSPSQGVANDLFVFEELSQIIVSVALVPPRQGIFVESARYLVAVATTVEVTLLAFFARADGIVDLEIDGNALYTLTQ 101
            MGL P +  AW++ID++L+LW Y ++ ++G A D   F+ L QIIVSVALVPPR G+F    +Y++AVAT VEV LLA           E D +AL T+ Q
Sbjct:   22 MGLLPEVRCAWVSIDNRLYLWDYEAARARGEA-DFLAFDGLDQIIVSVALVPPRPGVFRSKVKYVLAVATAVEVVLLALA--------FEDDADALATVGQ 113          
BLAST of Ggra9404.t1 vs. uniprot
Match: A0A7R9YE90 (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.240e-15
Identity = 49/86 (56.98%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    1 MGLFPRINRAWLTIDSKLFLWAYASSPSQGVANDLFVFEELSQIIVSVALVPPRQGIFVESARYLVAVATTVEVTLLAF-FARADG 85
            MGL P I+ AWL+ID+KLFLW Y  +  Q  A D   F+ L QIIVSVALVPPR G+F E  +YL+AVAT VE+ LLA  F   +G
Sbjct:   48 MGLLPEISCAWLSIDNKLFLWNYERARYQTDA-DFLEFDGLDQIIVSVALVPPRPGVFREKVKYLLAVATAVEIVLLAVAFEEPEG 132          
BLAST of Ggra9404.t1 vs. uniprot
Match: A0A1Y1VY37 (Nucleoporin-domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1VY37_9FUNG)

HSP 1 Score: 84.3 bits (207), Expect = 5.930e-14
Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    1 MGLFPRINRAWLTIDSKLFLWAYASSPSQGVANDLFVFEELSQIIVSVALVPPRQGIFVESARYLVAVATTVEVTLLAFFARADG 85
            MGLFP I RAW+T+D +LFLW Y         +D + FE+  QIIVSVALV P+ G+F++S +Y++AVAT +EV LL       G
Sbjct:   80 MGLFPEIQRAWITVDHRLFLWNYEDE------SDFYSFEDQEQIIVSVALVKPKPGVFIDSIKYVLAVATPLEVFLLGIKYEEAG 158          
BLAST of Ggra9404.t1 vs. uniprot
Match: A0A261XXE4 (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XXE4_9FUNG)

HSP 1 Score: 83.6 bits (205), Expect = 1.060e-13
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    1 MGLFPRINRAWLTIDSKLFLWAYASSPSQGVANDLFVFEELSQIIVSVALVPPRQGIFVESARYLVAVATTVEVTLL 77
            MGL P INRAW+T+D+KLFLW Y          D + FE+  QIIVSV LVPP++ +FV+   Y++ +ATT+E+ LL
Sbjct:   87 MGLLPEINRAWITVDNKLFLWNYIDG------TDFYSFEDQDQIIVSVGLVPPKRDVFVDGIEYVLVIATTLEIILL 157          
BLAST of Ggra9404.t1 vs. uniprot
Match: A0A6A0H3D0 (Uncharacterized protein n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0H3D0_HYAAZ)

HSP 1 Score: 81.3 bits (199), Expect = 2.140e-13
Identity = 80/310 (25.81%), Postives = 131/310 (42.26%), Query Frame = 0
Query:    1 MGLFPRINRAWLTIDSKLFLWAYASSPSQGVANDLFVFEELSQIIVSVALVPPRQGIFVESARYLVAVATTVEVTLLA----------------------FFARADGIV----------------------------------------DLEIDGN--ALYTLTQNRLIAVYDISAGASC-VATVNAKQEAKSANFSV----PSNDREFVSIHAVSPIASNSVQLVLVTSFGKQIYYSVSGASARLDRFTANSKIKPKTLRYVSFRPSPDKNIETTRPC-VHMAWCENGAAVLADLRENKSDRLITIFPD 240
            MGLFP I RAWLTIDS +++W Y         +DL  F+ L   I++VAL+ P+ G+F     +L+ + T  E+ LL                       F    DG+V                                         +++D +   L+TL++   I++YDI  GA   VAT+       +A+ +      +N +  VSI A++   ++ + L+  TS G ++Y++ + A++      A+++     L +V   P    N  T RP  VH A   NG +VL       SD L ++ P+
Sbjct:    7 MGLFPEIGRAWLTIDSAIYVWMYKDG------SDLAYFDGLQDTILAVALIKPKPGVFKPYIEHLLVLTTPSELLLLGVTFSQALEDDSTSCLTLLPEPLFSVANDGVVLATAEEGWFSRKCQKVNHSRSALASLLPSFLTLSEQDCLIQIDVDESRCCLFTLSERGSISLYDIEGGACTRVATLTHATIMTAASAAARTVDKANFKSIVSICALTASEASWLHLLAFTSCGVRLYFTATAAAS-----PASARPHHLQLVHVRLPPGFSANSLTHRPTRVHKALYSNGCSVLCASEAPDSDVLWSVSPE 305          
BLAST of Ggra9404.t1 vs. uniprot
Match: nuclear pore complex protein Nup155-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A0663 (nuclear pore complex protein Nup155-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A0663)

HSP 1 Score: 82.4 bits (202), Expect = 2.630e-13
Identity = 43/111 (38.74%), Postives = 68/111 (61.26%), Query Frame = 0
Query:    1 MGLFPRINRAWLTIDSKLFLWAYASSPSQGVANDLFVFEELSQIIVSVALVPPRQGIFVESARYLVAVATTVEVTLLAF-FARADGIVDLEIDGNALYTLTQNRLIAVYDI 110
            +G+FP I RAWLT+DS +F+W YA         DL  F+ LS+ I+SVALV P+ GIF +  +YL+ + T +E+ +L   FA  D   ++ +  + L+TLT + +  V+ +
Sbjct:   88 VGIFPEIGRAWLTVDSDIFVWRYADG------EDLAYFDGLSETILSVALVKPKPGIFRDHIKYLLVLTTPMEIVILGVSFAEEDVNGEMHLLPDPLFTLTSDNVYLVHTV 192          
The following BLAST results are available for this feature:
BLAST of Ggra9404.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITS16.860e-10459.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QG454.360e-5733.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M7BDQ96.010e-2033.07Uncharacterized protein n=1 Tax=Chelonia mydas Tax... [more]
nuclear pore complex protein Nup155-like n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FE4B12.150e-1829.92nuclear pore complex protein Nup155-like n=1 Tax=N... [more]
A0A7S1Y0495.190e-1747.52Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9YE904.240e-1556.98Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A1Y1VY375.930e-1449.41Nucleoporin-domain-containing protein n=1 Tax=Lind... [more]
A0A261XXE41.060e-1350.65Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
A0A6A0H3D02.140e-1325.81Uncharacterized protein n=1 Tax=Hyalella azteca Ta... [more]
nuclear pore complex protein Nup155-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A06632.630e-1338.74nuclear pore complex protein Nup155-like n=1 Tax=S... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalPFAMPF08801Nucleoporin_Ncoord: 81..206
e-value: 1.9E-11
score: 43.4
coord: 1..78
e-value: 3.4E-20
score: 72.2
NoneNo IPR availablePANTHERPTHR10350:SF6NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 78..347
NoneNo IPR availablePANTHERPTHR10350:SF6NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 1..78
IPR004870Nucleoporin, Nup155-likePANTHERPTHR10350NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 1..78
coord: 78..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:415246..416626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9404.t1Ggra9404.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 415246..416626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9404.t1 ID=Ggra9404.t1|Name=Ggra9404.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=370bp
MGLFPRINRAWLTIDSKLFLWAYASSPSQGVANDLFVFEELSQIIVSVAL
VPPRQGIFVESARYLVAVATTVEVTLLAFFARADGIVDLEIDGNALYTLT
QNRLIAVYDISAGASCVATVNAKQEAKSANFSVPSNDREFVSIHAVSPIA
SNSVQLVLVTSFGKQIYYSVSGASARLDRFTANSKIKPKTLRYVSFRPSP
DKNIETTRPCVHMAWCENGAAVLADLRENKSDRLITIFPDAELTAAGLSG
PKTRPSTMKTAEVVFDVSFGSSDESSSFNKVDTPVATRRGYNGFRSRQKA
PKRTFAISRTAPDSQTGVRECHEAVKDCHEAPNLFWVLTSTAMHLYEREF
NQLITCGKFYHLAVDLTQT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014908Nucleoporin_Nup133/Nup155_N
IPR004870Nucleoporin_Nup155