Ggra9345.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9345.t1
Unique NameGgra9345.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length288
Homology
BLAST of Ggra9345.t1 vs. uniprot
Match: A0A2V3IV61 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV61_9FLOR)

HSP 1 Score: 273 bits (697), Expect = 4.450e-88
Identity = 154/289 (53.29%), Postives = 195/289 (67.47%), Query Frame = 0
Query:    1 MDNEVIVLSDNSDDEVTAVMNPAATQAPNPAKEGQNPPLLPGIVVAKT-QPTEIPMPMPVPKDDFGDDEIEITSVTNTKSREGKNVSQVASETRTELECVGERQGIRALRDYPHFRFDCVTIPFKKARSRVKETYCDLCYCYICDVLASQCTKWSMHCK-VTRAGKYQKERDAILDERKRRELTTDEGRCTMLKRIMRPQFVNESEYEQFVELPNEDEEFEDDGCPHSGSEDDQASMPIGFDHGHVMLSLQRVRLGGKGSKLERMVDLNPETESYVTFQRGASGYEDLL 287
            M+ EVIVLSD+SDD VT    P       P  +  +PP  P +V  K   P   P+P PV   D  DDE+EIT VT++++R+    +   + +RT+LECVGER+GI ALRDYPHFRF C   PFKK R+R+KET C+ C+CYICDVLA+ CTKWS HCK V    KY+KER+  L+ER+RRE +TD  R T++KRI++PQ V+E EYEQ VELPNEDEEFEDDG PHS S+DD AS P+ FDH  +   LQ +     GS L+R ++ NPE  +Y T  RG S + DLL
Sbjct:    1 MNTEVIVLSDSSDDPVT----PVEIVPTVPENQLSSPP--PRLVPPKQISPQLQPLPSPVGFSD--DDELEITLVTSSQTRKDTTATPPVTSSRTDLECVGERRGILALRDYPHFRFQCGIHPFKKMRARMKETCCERCFCYICDVLATDCTKWSAHCKAVDTVTKYRKERELRLEERRRREQSTDGARHTIVKRIIKPQPVDEREYEQLVELPNEDEEFEDDGFPHSCSDDDAASAPVDFDHPKLNPMLQHLHRDNNGSFLQRKLEKNPERPAYSTIFRGPSAFADLL 281          
BLAST of Ggra9345.t1 vs. uniprot
Match: R7QIC1 (SET domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIC1_CHOCR)

HSP 1 Score: 103 bits (257), Expect = 4.220e-21
Identity = 50/106 (47.17%), Postives = 69/106 (65.09%), Query Frame = 0
Query:   94 TELECVGERQGIRALRDYPHFRFDCVTIPFKKARSRVKETYCDLCYCYICDVLASQCTKWSMHCK-VTRAGKYQKERDAILDERKRR-ELTTDEGRCTMLKRIMRP 197
            T++ECVG R G+RAL DYPHFRF CV   FK+ R+  KE YC  C+CY+CD+LAS+C +W  H K V    K++ ER++ L+ R+RR +  +   R   + R  RP
Sbjct:  776 TDVECVGTRVGVRALVDYPHFRFQCVVEAFKRQRAAKKERYCARCFCYVCDILASECKEWPAHAKAVDNVHKWRVERESRLEMRRRRKQAESPTARRPAIARYTRP 881          
BLAST of Ggra9345.t1 vs. uniprot
Match: A0A1S2YCC4 (uncharacterized protein LOC101489967 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YCC4_CICAR)

HSP 1 Score: 65.1 bits (157), Expect = 2.430e-9
Identity = 32/74 (43.24%), Postives = 43/74 (58.11%), Query Frame = 0
Query:   98 CVGERQGIRALRDYPHFRFDCVTIPFKKARSRVKETYCDLCYCYICDVLASQCTKWSM--HCKVTRAGKYQKER 169
            CV   +G  ALRDYPH R  C+  PFK   +  +E+YCD CYCY+CD  A+ C  W++  HC     G +  +R
Sbjct:   79 CVLGEKGKIALRDYPHSRHLCLKFPFK---TTSRESYCDKCYCYVCDS-AAPCKYWTLSRHCNAENIGSWNNQR 148          
BLAST of Ggra9345.t1 vs. uniprot
Match: A0A2K3N2S0 (Uncharacterized protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3N2S0_TRIPR)

HSP 1 Score: 63.2 bits (152), Expect = 3.720e-9
Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 0
Query:  107 ALRDYPHFRFDCVTIPFKKARSRVKETYCDLCYCYICDVLASQCTKWSM--HCKVTRAGKYQKER 169
            ALRDYPH R  C+  PFK   +  +E+YCD CYCY+CD  A+ C  W+   HC    AG ++ +R
Sbjct:   36 ALRDYPHSRHLCIKFPFK---TTARESYCDKCYCYVCDS-AAPCKYWTTGNHCSAESAGYWKDQR 96          
BLAST of Ggra9345.t1 vs. uniprot
Match: A0A2Z6PB70 (Uncharacterized protein (Fragment) n=2 Tax=Trifolium TaxID=3898 RepID=A0A2Z6PB70_TRISU)

HSP 1 Score: 63.9 bits (154), Expect = 5.260e-9
Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 0
Query:   98 CVGERQGIRALRDYPHFRFDCVTIPFKKARSRVKETYCDLCYCYICDVLASQCTKWSM--HCKVTRAGKYQKER 169
            C+   +G  ALRDYPH R  C+  PFK   +  +E+YCD CYCY+CD  A+ C  W+   HC    AG ++ +R
Sbjct:   76 CIVGEKGKVALRDYPHSRHLCLKFPFK---TTPRESYCDKCYCYVCDS-AAPCKYWTTGNHCYAESAGYWKDQR 145          
BLAST of Ggra9345.t1 vs. uniprot
Match: A0A5N6N8N5 (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6N8N5_9ASTR)

HSP 1 Score: 63.5 bits (153), Expect = 1.060e-8
Identity = 31/75 (41.33%), Postives = 42/75 (56.00%), Query Frame = 0
Query:   83 KNVSQVASETRTELECVGERQGIRALRDYPHFRFDCVTIPFKKARSRVKETYCDLCYCYICDVLASQCTKWSMHC 157
            +N  Q+  +   E+  + E+  + A RDYPH R  CV  PF K      E+YC LCYC++CDV A+ C  W  HC
Sbjct:   74 ENGHQINLQDPPEIYIISEKGQVVACRDYPHSRHLCVKHPFGKTSH---ESYCKLCYCFVCDV-AAPCKSWFGHC 144          
BLAST of Ggra9345.t1 vs. uniprot
Match: A0A836C2D4 (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C2D4_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 2.550e-7
Identity = 46/172 (26.74%), Postives = 72/172 (41.86%), Query Frame = 0
Query:    6 IVLSDNSDDEVTAVMNPAATQAPNPAKEGQNPPLLPGIVVAKTQPTEIPMPMPVPKDDFGDDEIEITSVTNTKSREGKNVSQVASETRTELECVGERQGIRALRDYPHFRFDCVTIPFKKARSRVKETYCDLCYCYICDVLASQCTKWSM------HCKVTRAGKYQKERDA 171
            + L  +SD++   +  PA     +PA   +     PG    +     I +      D   DD++E+  V         N +    +   +L   G   G  A RD PH R DC   PF+++ S     +C  CYC++CDV ASQC  W        H    + G +++ R+A
Sbjct:    8 LTLDSDSDNDANTLSRPAKRARRSPAGAARRSSSAPGPSRLRGAGDTIEL-----LDSDDDDDVEVVDVPRRAPNPAANPTAQLGDDE-DLVITGAT-GQVATRDLPHPRMDCAEHPFRESTSASNAAHCAQCYCFVCDVKASQCRFWGTGARERDHANARKLGYWRRLREA 172          
BLAST of Ggra9345.t1 vs. uniprot
Match: A0A8J6EJ63 (Uncharacterized protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6EJ63_ELECQ)

HSP 1 Score: 62.0 bits (149), Expect = 3.860e-7
Identity = 44/124 (35.48%), Postives = 57/124 (45.97%), Query Frame = 0
Query:   64 FGDDEIEITSVTNTKSREGKNVSQVASETRTELECVGERQGI---RALRDYPHFRFDCVTIPFKKARSRVK------ETYCDLCYCYICDVLASQCTKWSM----HCKVTRAGKYQKE-RDAIL 173
              DDE E+T + N+             E +T LE + E   I   R  R  PH R+DC T PF +     +       +YC+ CYCY+CD  AS+C+KW      HC      KY KE RD  L
Sbjct:   28 ISDDEGEVT-LGNSVXXXXXXXXXXLQEKKT-LEVLDEELAITFSRKGRVMPHARYDCSTHPFSRIEQETQVPVEKNASYCNECYCYLCDKPASECSKWESIGHCHCNAHNKSKYWKEQRDTAL 149          
BLAST of Ggra9345.t1 vs. uniprot
Match: A0A830C394 (Uncharacterized protein n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830C394_9LAMI)

HSP 1 Score: 58.9 bits (141), Expect = 4.000e-7
Identity = 34/81 (41.98%), Postives = 45/81 (55.56%), Query Frame = 0
Query:   94 TELECVGERQGIRALRDYPHFRFDCVTIPFKKARSRVKETYCDLCYCYICDVLASQCTKW---SMHCKVTRAGKYQKERDA 171
            ++L  V ER G  A RDYPH R +C    F+K      ++YC LCYCY+CDV A  C+KW   S HC       + +E+ A
Sbjct:   72 SDLHVVAER-GQVACRDYPHPRHNCAKFHFEKTPH---DSYCKLCYCYVCDVSAP-CSKWVGSSGHCHAFNNEAWDQEKKA 147          
BLAST of Ggra9345.t1 vs. uniprot
Match: A0A1E7ELF0 (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ELF0_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.650e-7
Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 0
Query:  104 GIRALRDYPHFRFDCVTIPFKKARSRVKETYCDLCYCYICDVLASQCTKWS-MHCKVTRAGKYQKERDAILDERK 177
            G  AL DYPH R +CV   F K      E +C  CYC++CD+ AS+C +W   HCK     K++ +R  I ++RK
Sbjct:  421 GKNALSDYPHPRHECVVKSFTKN----PEQFCPNCYCFVCDIKASECAEWKDCHCKADSDIKWRLQRRKIRNKRK 491          
The following BLAST results are available for this feature:
BLAST of Ggra9345.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A2V3IV614.450e-8853.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIC14.220e-2147.17SET domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A1S2YCC42.430e-943.24uncharacterized protein LOC101489967 n=1 Tax=Cicer... [more]
A0A2K3N2S03.720e-946.15Uncharacterized protein n=1 Tax=Trifolium pratense... [more]
A0A2Z6PB705.260e-943.24Uncharacterized protein (Fragment) n=2 Tax=Trifoli... [more]
A0A5N6N8N51.060e-841.33Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A836C2D42.550e-726.74Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A8J6EJ633.860e-735.48Uncharacterized protein n=1 Tax=Eleutherodactylus ... [more]
A0A830C3944.000e-741.98Uncharacterized protein n=1 Tax=Phtheirospermum ja... [more]
A0A1E7ELF04.650e-741.33Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33443ZGC:112980coord: 22..157
NoneNo IPR availablePANTHERPTHR33443:SF2ZGC:112980coord: 22..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:40920..41783 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9345.t1Ggra9345.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 40920..41783 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9345.t1 ID=Ggra9345.t1|Name=Ggra9345.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=288bp
MDNEVIVLSDNSDDEVTAVMNPAATQAPNPAKEGQNPPLLPGIVVAKTQP
TEIPMPMPVPKDDFGDDEIEITSVTNTKSREGKNVSQVASETRTELECVG
ERQGIRALRDYPHFRFDCVTIPFKKARSRVKETYCDLCYCYICDVLASQC
TKWSMHCKVTRAGKYQKERDAILDERKRRELTTDEGRCTMLKRIMRPQFV
NESEYEQFVELPNEDEEFEDDGCPHSGSEDDQASMPIGFDHGHVMLSLQR
VRLGGKGSKLERMVDLNPETESYVTFQRGASGYEDLL*
back to top