Ggra9963.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9963.t1
Unique NameGgra9963.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length95
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000882_piloncontigtig00000882_pilon:68978..69262 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9963Ggra9963Gracilaria gracilis GNS1m malegenetig00000882_pilon 68978..69262 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9963.t1.start1Ggra9963.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000882_pilon 68978..68980 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9963.t1.CDS1Ggra9963.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000882_pilon 68978..69262 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9963.t1.exon1Ggra9963.t1.exon1Gracilaria gracilis GNS1m maleexontig00000882_pilon 68978..69262 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9963.t1.stop1Ggra9963.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000882_pilon 69260..69262 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9963.t1Ggra9963.t1Gracilaria gracilis GNS1m malepolypeptidetig00000882_pilon 68978..69262 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9963.t1 ID=Ggra9963.t1|Name=Ggra9963.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=95bp
MEMSRPTAPRAHVDIVLNDSMHRESQADEAGGLKGGDEDEQFWFGQEGVV
WARVGIEIQDVDDESTDDGEENGCEESDDCRCWYNSSTWAGVQY*
back to top

spliced messenger RNA

>Ggra9963.t1 ID=Ggra9963.t1|Name=Ggra9963.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=285bp|location=Sequence derived from alignment at tig00000882_pilon:68978..69262+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGATGAGCAGACCCACAGCGCCACGCGCCCATGTGGACATTGTGCT
GAATGATTCCATGCACCGCGAGAGCCAGGCCGATGAGGCAGGAGGCCTAA
AAGGTGGTGATGAGGATGAGCAGTTTTGGTTTGGGCAAGAAGGTGTTGTG
TGGGCAAGGGTTGGTATAGAGATCCAAGACGTCGATGACGAATCGACAGA
TGATGGAGAAGAAAATGGCTGCGAGGAAAGCGACGATTGCAGATGCTGGT
ACAACTCGAGCACTTGGGCAGGTGTGCAGTACTGA
back to top

protein sequence of Ggra9963.t1

>Ggra9963.t1 ID=Ggra9963.t1|Name=Ggra9963.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=95bp
MEMSRPTAPRAHVDIVLNDSMHRESQADEAGGLKGGDEDEQFWFGQEGVV
WARVGIEIQDVDDESTDDGEENGCEESDDCRCWYNSSTWAGVQY*
back to top

mRNA from alignment at tig00000882_pilon:68978..69262+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9963.t1 ID=Ggra9963.t1|Name=Ggra9963.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=285bp|location=Sequence derived from alignment at tig00000882_pilon:68978..69262+ (Gracilaria gracilis GNS1m male)
ATGGAGATGAGCAGACCCACAGCGCCACGCGCCCATGTGGACATTGTGCT
GAATGATTCCATGCACCGCGAGAGCCAGGCCGATGAGGCAGGAGGCCTAA
AAGGTGGTGATGAGGATGAGCAGTTTTGGTTTGGGCAAGAAGGTGTTGTG
TGGGCAAGGGTTGGTATAGAGATCCAAGACGTCGATGACGAATCGACAGA
TGATGGAGAAGAAAATGGCTGCGAGGAAAGCGACGATTGCAGATGCTGGT
ACAACTCGAGCACTTGGGCAGGTGTGCAGTACTGA
back to top

Coding sequence (CDS) from alignment at tig00000882_pilon:68978..69262+

>Ggra9963.t1 ID=Ggra9963.t1|Name=Ggra9963.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=285bp|location=Sequence derived from alignment at tig00000882_pilon:68978..69262+ (Gracilaria gracilis GNS1m male)
ATGGAGATGAGCAGACCCACAGCGCCACGCGCCCATGTGGACATTGTGCT
GAATGATTCCATGCACCGCGAGAGCCAGGCCGATGAGGCAGGAGGCCTAA
AAGGTGGTGATGAGGATGAGCAGTTTTGGTTTGGGCAAGAAGGTGTTGTG
TGGGCAAGGGTTGGTATAGAGATCCAAGACGTCGATGACGAATCGACAGA
TGATGGAGAAGAAAATGGCTGCGAGGAAAGCGACGATTGCAGATGCTGGT
ACAACTCGAGCACTTGGGCAGGTGTGCAGTACTGA
back to top