Ggra6303.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6303.t1
Unique NameGgra6303.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length359
Homology
BLAST of Ggra6303.t1 vs. uniprot
Match: A0A2V3IN62 (Putative ankyrin repeat protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN62_9FLOR)

HSP 1 Score: 381 bits (978), Expect = 1.590e-126
Identity = 182/326 (55.83%), Postives = 244/326 (74.85%), Query Frame = 0
Query:   32 QRSFDALCINLSAPLSPAAWQLVHRALEAAKTDPYGDGDQSPLTGSTFHPMRKAWATGLDARDAVLKHRASFSLHRCAWEGDVDHVNRLIRTAREKQRCGHLFALTHLLEQRVSNLRLSPLHYVCFSARSLTNIPEPMASNFVGVVHALCQAGARVDSRDIAGYTPLSIASSFICNPTTLRMARVLVAYGADPNAKTRFGEPIIVSSIIGGNKDAFRTLLRAGADITKPDRLGVSPRDLSSRRPELQTVIAEVERELAAFPMVCDVCGKAGVTKFCAACRTVYYCSRECQRDGWRSGHRERCTASSCVSGEKDITSGIMSDKAVPG 357
            +R+ +   + L  PLS ++ + V+ A+ AA+ DPYGDGDQS L   TFHP+R++WATGLDA+ AVL    ++ ++R AWE D++ VN LI  AR+K+  G   ALT +LE+R+S +RLSPLHY CFSARS  NI E  +  FV VV ALC+AGARVDSRDIAGYTPLS+A+ F+ N TT+RMA VL++YGA+ NA+TRFGE I+V +I+G N D+FRTLLR GAD+ + DR G++PR +++R P L T+I EVERE A   M CD CG+ GV KFCAACRTV+YCSRECQ+ GWR+GHR+ C  S+C +   D++S +++++ VPG
Sbjct:   31 RRTLEDSYLGLDRPLSTSSLRAVYTAVAAAQNDPYGDGDQSQLPNPTFHPLRESWATGLDAQTAVLAEEEAWEMNRSAWEPDLEEVNELIEKARQKEAEGDHGALTRVLERRLSLMRLSPLHYACFSARSRANITEEGSQEFVDVVEALCRAGARVDSRDIAGYTPLSVAAGFMSNSTTIRMAEVLISYGANVNARTRFGESILVPTIMGANVDSFRTLLRNGADLMQKDRTGLTPRKMAARWPALLTIINEVEREQALARMACDACGEKGVNKFCAACRTVFYCSRECQKAGWRAGHRDLCGKSACAAHRVDVSSDMITNEMVPG 356          
BLAST of Ggra6303.t1 vs. uniprot
Match: A0A7S0D9V0 (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D9V0_MICPS)

HSP 1 Score: 111 bits (277), Expect = 1.660e-24
Identity = 95/276 (34.42%), Postives = 129/276 (46.74%), Query Frame = 0
Query:   34 SFDALCINLSAPLSPAAWQLVHRALEAAKTDPYGDGDQSPLTG-STFHPMRKAWATGLDARDAVLKHRASFSLHRCA-WEGDVDHVNRLIRTARE------------KQRCGHLFALTHLLEQRVSNLRLSPLHYVCFSARSLTNIPEPMASNFVGVVHALCQAGARVDSRDIAGYTPLSIASSFICNPTT--LRMARVLVAYGADPNAKTRFGEPIIVSSIIGGNKDAFRTLLRAGADITKPDRLGVSPRDLSSRRPELQTVIAEVERELAAFPM 293
            +F+ +     A L  A       AL A+  D +GDGDQ PL      HP+R+ W++  D  + +     + S    A + GD D V R +  AR+             +    +  LT LLE+R SNLR  PLH V   AR L     P+AS FV     L  AGARVDSRD+AG+T L+  ++ +  P    L    VL   GADPN   RFGE  I ++   GN      LL  GAD +     GVS   LS        ++++  REL + P+
Sbjct:   24 AFERMRARDDAVLHDALASTCDTALNAS--DAFGDGDQKPLLNVMNSHPLRQLWSSSGDLFEKLDASPCAMSPFWVACFNGDKDAVRRAVDDARKADMNSTHAEILTSETPEGVSPLTRLLEKRESNLRYPPLHAVVAGARCLAR-HAPIAS-FVETASVLVAAGARVDSRDVAGHTALAKCTNGVDTPNACLLIALEVLGPNGADPNLANRFGETPIGAAAPSGNVGCLSVLLELGADPSLDAGAGVSA--LSMCHGVCAMLVSQDVRELFSLPV 293          
BLAST of Ggra6303.t1 vs. uniprot
Match: A0A1X6NMT1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMT1_PORUM)

HSP 1 Score: 103 bits (256), Expect = 1.350e-21
Identity = 77/223 (34.53%), Postives = 103/223 (46.19%), Query Frame = 0
Query:   44 APLSPAAWQLVHRALEAAKTDPYGDGDQSPLTG-------STFHPMRKAWATGLDARDAVLKHRASFSLHRCAWEGDVDHVNRLIRTAREKQRCGHLFALTHLLEQRVSNLRLSPLHYVCFSAR-----SLTNIPEPMASNFVGVVHALCQAGARVDSRDIAGYTPLSIASSFICNPTTLRMARVLVAYGADPNAKTRFGEPIIVSSIIGGNKDAFRTLLRAG 254
            A L  AA   V  AL AA +DPYGDGDQSPL+        +   P+R A A GLD   A      + +   C                           +  L+E+RVS  RLS +  V F AR            P A  F   +  L  AGAR D+RDI G TPL++A+    +  ++ +   L A GAD  A  RFGEPI+++++  G+ + F  LLRAG
Sbjct:   23 ATLPRAAKAAVRSALTAAASDPYGDGDQSPLSTRRGPAGVAQGAPLRAAVAGGLDVAAAAAADPFAAA---CVXXXXXXXXXXXXXXXXXXXXXX----VARLVERRVSLRRLSAVGVVVFGARLGXXXXXXXXXXPPARRFTDTLGVLLDAGARADARDIVGGTPLALATGAGSSAASVALVPALAAAGADAGAVDRFGEPILMAAVAAGSVNGFMALLRAG 238          
BLAST of Ggra6303.t1 vs. uniprot
Match: E1ZKT0 (MYND-type domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZKT0_CHLVA)

HSP 1 Score: 104 bits (260), Expect = 4.910e-21
Identity = 86/286 (30.07%), Postives = 125/286 (43.71%), Query Frame = 0
Query:   68 DGDQSPLTG-------STFHPMRKAWATGL--DARDAVLKHRASFSLHRCAWEGDVDHVNRLIRTAREKQRCGHLFALTHLLEQRVSNLRLSPLHYVCFSARSLTNIPEPMASNFVGVVHALCQAGARVDSRDIAGYTPLSIASSFICNPTTLRMARVLVAYGADPNAKTRFGEPIIVSSIIGGNKDAFRTLLRAGADITKPDRLGVSPRDLSSRRPELQTVIAEVERELAAFPM--------VCDVCGKAGVTKFCAACRTVYYCSRECQRDGWRSGHRERCTAS 336
            DGDQS L G            ++  +   L  +A  A L + A     R A+ GD D      R  +              +  R   LRL PL  V  +        +        V+ A C+AG RVD+RD+AGYT L  A++   +   L +A+VL+ +GADPN            +I+  ++ A R LL A       D  G S  +++   P +   +A V+R L  +           C  CGKAG +K C ACR   YCSR CQR  W++ H++ C+A+
Sbjct:  133 DGDQSGLPGILPGTPGQRMRDLQADFGAQLQPEAAIAALPNDAL----RAAFMGDADRFKAAFRPEQH-------------ISLRAWQLRL-PLPAVAVAGAQRVTRADGGPGGHAAVLRAACEAGCRVDARDVAGYTALHHATA---HSARLDLAQVLLEHGADPNXXXXXXXXXXXXAIMSQDQAAVRLLLAAXXXXXXXDLSGCSIEEVAQHCPPM---VALVDRALGRYQQNAHLQPGAPCFSCGKAGASKRCDACRVALYCSRTCQRQHWKA-HKKECSAA 393          
BLAST of Ggra6303.t1 vs. uniprot
Match: A0A7S3YMI9 (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YMI9_HETAK)

HSP 1 Score: 103 bits (257), Expect = 1.160e-20
Identity = 101/360 (28.06%), Postives = 151/360 (41.94%), Query Frame = 0
Query:   62 KTDPYGDGDQSP----LTGSTFHPMRKAWATGLDARDAVLKHRASFSLHRCAW--EGDVDHVNRLIRTAREKQRCGHLFALTHLLEQRVSNLRLSPLHYVCFSARSL---TNIPEPMASNFVGVVHALCQAGARVDSRDIAGYTPLSIASSFICNPTTLRMARVLV-AYGADPNAKTRFGEPIIVSSIIGGNKDAFRTLLRAGAD----------------ITKPDRLG---------VSPRDLSSRRPELQ---------------------TVIAE--------VERELAAFPMV-------CDVCGKAG--VTKFCAACRTVYYCSRECQRDGWRSGHRERCTASSCVSGEKDITSG 348
            + D +GDGDQS     L       ++  W    D      + R    +  C +  E +V     + +   E++R         LLEQRVSN R++PLH     AR+    + +  P  +N  GVV AL QAGAR++S+DIAGYTP   A++   +P T ++ R LV  Y ADPN   RFG   I  + +   +    TLL  GAD                +T    L          +S   L  R+ +++                     TV A+        V  +     MV        + C + G    K C+ C +V+YCSR+CQ+  W++ H++ C  +   S   D +SG
Sbjct:   57 EADKFGDGDQSYTRACLPSDPGQHLKNIWCMKCDLVKLCTRGRCPTFVLDCFFGREAEVKAAIAMTKAESEERR--------QLLEQRVSNCRMAPLHVAIAGARNFNPASGVSFPAGANHFGVVTALAQAGARIESKDIAGYTPAHHATTASSSPPTWKIFRYLVDKYDADPNNYNRFGHLAIQEAAMNRIEPLMETLLDNGADPMLRSKDSLPPGYEHLVTNTQTLVRVWPTGQHLLSQGSLPHRKAKVKEGDKCQIGHLLKRADLNGEQGTVGAQNYATGRWQVTLDSGEQVMVKRHNIVPLNTCNQCGRAAQKKCSLCVSVWYCSRQCQKVNWKT-HKQFCQGNKTAS--SDSSSG 405          
BLAST of Ggra6303.t1 vs. uniprot
Match: A0A1M2W693 (MYND-type domain-containing protein n=2 Tax=Trametes TaxID=5324 RepID=A0A1M2W693_TRAPU)

HSP 1 Score: 90.5 bits (223), Expect = 1.330e-16
Identity = 60/171 (35.09%), Postives = 91/171 (53.22%), Query Frame = 0
Query:  174 VGVVHALCQAGARVDSRDIAGYTPLSIASSFICNPTTLRMARVLVAYGADPNAKTRFGEPIIVSSIIGGNKDAFRTLLRAGADITKPDRLGVSPRDLSSR-RPELQTVIAEVERELA--AFPM---VCDVCGKAG-VTKFCAACRTVYYCSRECQRDGWRSGHRERCTASS 337
            +G +  L + GA  +  DI GYTPL  A   +  P    MAR+L+ +GA+P+A+ RFG   IV +      +A   L+  GA +  P+  G +P     +  P++  V+ + +R  A  A P+    C  C K+G   KFCA C T +YCSRECQ++ W++ H+  C   S
Sbjct:   68 IGTLKYLLKHGAPPNVPDIIGYTPLHHAC--MAGPRA-DMARILLEHGANPDAQDRFGSVAIVGAFQNEAIEAIEVLMEFGAQLDIPEAGGHTPDGFFIKCGPKVTAVVQKWKRRRAGAAQPLDDKACATCAKSGGPLKFCAKCHTTWYCSRECQKEDWKT-HKHTCVPFS 234          
BLAST of Ggra6303.t1 vs. uniprot
Match: A0A2P6TYB8 (Mg-protoporphyrin IX chelatase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TYB8_CHLSO)

HSP 1 Score: 92.0 bits (227), Expect = 1.630e-16
Identity = 60/197 (30.46%), Postives = 99/197 (50.25%), Query Frame = 0
Query:  147 LRLSPLHYVCFSARSLTNIPE-PMASNFVGVVHALCQAGARVDSRDIAGYTPLSIASSFICNPTTLRMARVLVAYGADPNAKTRFGEPIIVSSIIGGNKDAFRTLLRAGADITKPDRLGVSPRDLSSRRPELQTVIAEVE-RELAAFPMV----CDVCGKAGVTKFCAACRTVYYCSRECQRDGWRSGHRERCTASS 337
            LRLS    +   A+ ++ + + P  S    ++  +C+ GARVD+RDIAGYT L+ A+    +   L +A+VL+ +G  P       + +          ++ + LL AGAD    +  G+S  D++   P+   ++ + + +      +V    C  CGK G TK C AC +  YC R CQR  W+  H+++C A S
Sbjct:  204 LRLSLPAVIVSGAQRVSYVNDRPTGSEHAAILRLVCETGARVDARDIAGYTALAHATG---HHPELELAKVLLEFGDVPLHHACMAQEL----------ESVQLLLDAGADPNAKELNGISVEDVAKCNPQALALVHKAQGKHQRNADLVSGGACHNCGKPGATKRCQACLSALYCDRTCQRQAWKQ-HKKQCAAGS 386          
BLAST of Ggra6303.t1 vs. uniprot
Match: J4GGB3 (MYND-type domain-containing protein n=1 Tax=Fibroporia radiculosa TaxID=599839 RepID=J4GGB3_9APHY)

HSP 1 Score: 89.0 bits (219), Expect = 7.060e-16
Identity = 56/169 (33.14%), Postives = 86/169 (50.89%), Query Frame = 0
Query:  173 FVGVVHALCQAGARVDSRDIAGYTPLSIASSFICNPTTLRMARVLVAYGADPNAKTRFGEPIIVSSIIGGNKDAFRTLLRAGADITKPDRLGVSPRDLS-SRRPELQTVIAEVERELAA--FPM----VCDVCGKA-GVTKFCAACRTVYYCSRECQRDGWRSGHRERC 333
            FV  +  L   GA  D  D+ G+  L  ++ + C   T+ + R+L+A GA+PN + ++GE  I S+      DA   L+  GAD+   D  G SPR +  S  P++   + +  R+ +    PM    VC  CGK  G    C+ C T +YCS++CQR  W + H+  C
Sbjct:  123 FVNTLKFLLAHGAPTDVEDVVGHIVLHHSAQY-CQGCTVVLMRMLLAAGANPNHRNKYGEVPIFSAFQANTADAVELLMEYGADLDIADAEGTSPRSIFLSAGPQVTAAVMKWLRKRSGEEMPMAEGKVCHNCGKIEGKLNICSRCHTAWYCSKDCQRVDWPN-HKRTC 289          
BLAST of Ggra6303.t1 vs. uniprot
Match: A0A4Y7QBD7 (Ankyrin n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7QBD7_9AGAM)

HSP 1 Score: 85.9 bits (211), Expect = 7.530e-15
Identity = 62/203 (30.54%), Postives = 103/203 (50.74%), Query Frame = 0
Query:  145 SNLRLSPLHYVCFSARSLTNIPEPMASNFVGVVHALCQAGARVDSRDIAGYTPLSIASSFICNPTTLRMARVLVAYGADPNAKTRFGEPIIVSSIIGGNKDAFRTLLRAGADITKPDRLGVSPRDLS-SRRPELQTVIAEVEREL---AAFPM---VCDVCGKA---GVTKFCAACRTVYYCSRECQRDGWRSGHRERCTASS 337
            ++LRL  L +    A+ L  +    +     V+  LC  G  VD +D+AGY+ L  +   + N   L +A +LV +GA+ N + +FG   +   +   +  +   LL  GA++   D  G+SP  +  S  P++  V+ +  R+    A  P+    C VCGK+       FCA CR V YCSRECQ++ W++ H+  C +++
Sbjct:   88 TDLRLGYLAFTVLGAQRL-EVLNGGSMRHGEVLEYLCSMGCPVDQQDLAGYSALFHS---VMNFPRLDLAEILVRHGANVNHQNKFGAVALQECLQQNHWKSMDFLLEHGAELNIKDADGISPAMMYVSAGPQITAVVRKWIRKRSGEAEGPLENRACKVCGKSPNEAKLSFCAKCRLVKYCSRECQKNDWKA-HKPMCKSTN 285          
BLAST of Ggra6303.t1 vs. uniprot
Match: A0A4R0R524 (MYND-type domain-containing protein n=1 Tax=Steccherinum ochraceum TaxID=92696 RepID=A0A4R0R524_9APHY)

HSP 1 Score: 84.0 bits (206), Expect = 3.750e-14
Identity = 62/188 (32.98%), Postives = 89/188 (47.34%), Query Frame = 0
Query:  154 YVCFSARSLTNIPEPMASNFVGVVHALCQAGARVDSRDIAGYTPLSIASSFICNPTTLRMARVLVAYGADPNAKTRFGEPIIVSSIIGGNKDAFRTLLRAGADITKPDRLGVSPRDLSSRR-PELQTVIAE--VERELAAFPMV----CDVCGK-AGVTKFCAACRTVYYCSRECQRDGWRSGHRERC 333
            YV F       +        V ++  L QAGA  D  DI GYT L+  +  +   + +R+AR+L+  GADPN +TR+G   I+        D    L+  G+D++  D  GV P  L  +  P +  V+A+  + R     P+     C  CG+ A   K C  C  V YCS ECQR+ W   H+E C
Sbjct:  130 YVAFVVMGAQRLVSGPNMQHVPLLKYLLQAGAPPDVEDIVGYTALNHIT--MQAGSDVRLARILLENGADPNHRTRYGAIPILDCFTTNQVDCADLLMEFGSDLSIADADGVVPSSLYLQAGPRIAAVVAKWLMRRNGEDAPLDDTKRCQSCGRIASSLKQCNDCHMVRYCSAECQRNDWPK-HKESC 314          
The following BLAST results are available for this feature:
BLAST of Ggra6303.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A2V3IN621.590e-12655.83Putative ankyrin repeat protein n=1 Tax=Gracilario... [more]
A0A7S0D9V01.660e-2434.42Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A1X6NMT11.350e-2134.53Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
E1ZKT04.910e-2130.07MYND-type domain-containing protein n=1 Tax=Chlore... [more]
A0A7S3YMI91.160e-2028.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1M2W6931.330e-1635.09MYND-type domain-containing protein n=2 Tax=Tramet... [more]
A0A2P6TYB81.630e-1630.46Mg-protoporphyrin IX chelatase n=1 Tax=Chlorella s... [more]
J4GGB37.060e-1633.14MYND-type domain-containing protein n=1 Tax=Fibrop... [more]
A0A4Y7QBD77.530e-1530.54Ankyrin n=1 Tax=Rickenella mellea TaxID=50990 RepI... [more]
A0A4R0R5243.750e-1432.98MYND-type domain-containing protein n=1 Tax=Stecch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 230..259
e-value: 160.0
score: 10.8
coord: 147..189
e-value: 460.0
score: 7.5
coord: 193..226
e-value: 13.0
score: 14.7
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 194..228
e-value: 0.0067
score: 16.8
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 295..333
e-value: 8.3E-10
score: 38.6
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 295..333
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 295..333
score: 12.207615
NoneNo IPR availableGENE3D6.10.140.2220coord: 292..335
e-value: 6.0E-11
score: 44.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR24126ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATEDcoord: 108..280
NoneNo IPR availablePANTHERPTHR24126:SF14ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATEDcoord: 108..280
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 291..335
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 84..282
e-value: 5.6E-21
score: 76.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 103..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:500358..501434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6303.t1Ggra6303.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 500358..501434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6303.t1 ID=Ggra6303.t1|Name=Ggra6303.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=359bp
MRRARPTSQPTSQPTSQPTSSATSDVTDEVFQRSFDALCINLSAPLSPAA
WQLVHRALEAAKTDPYGDGDQSPLTGSTFHPMRKAWATGLDARDAVLKHR
ASFSLHRCAWEGDVDHVNRLIRTAREKQRCGHLFALTHLLEQRVSNLRLS
PLHYVCFSARSLTNIPEPMASNFVGVVHALCQAGARVDSRDIAGYTPLSI
ASSFICNPTTLRMARVLVAYGADPNAKTRFGEPIIVSSIIGGNKDAFRTL
LRAGADITKPDRLGVSPRDLSSRRPELQTVIAEVERELAAFPMVCDVCGK
AGVTKFCAACRTVYYCSRECQRDGWRSGHRERCTASSCVSGEKDITSGIM
SDKAVPGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR002893Znf_MYND
IPR036770Ankyrin_rpt-contain_sf