Ggra6239.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6239.t1
Unique NameGgra6239.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length239
Homology
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BLAST of Ggra6239.t1 vs. uniprot
Match: A0A2V3IF36 (L-ascorbate oxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF36_9FLOR)

HSP 1 Score: 182 bits (461), Expect = 3.810e-50
Identity = 84/129 (65.12%), Postives = 103/129 (79.84%), Query Frame = 0 
Query:   17 YSTSRSLSKAGLSESAKEGTQVVKAKKDEVIDWVFRKTMALSRDDEIHPWHLYLHNFWVLGYGEYQTTWNKSSIKTYNTRRAVSRNRAMLYPGFWTVMPMKAYNPDAAYFQCHILPHLVMGMGFVVKSG 145
            ++ +++L+ AGL  + K G QVVK KKDEVIDWVF+ T++LS   EIHPWHL+LHNFWVLG+GEY T WN+SS+ TYN +R V RN  +LYPG WTV+ MKA NP AA+F CHILPHLVMGMGFVV+ G
Sbjct:  415 FNYAQNLTDAGLPIATKSGAQVVKVKKDEVIDWVFQNTVSLSGAGEIHPWHLHLHNFWVLGFGEYNTAWNRSSVPTYNLKRPVFRNTMILYPGSWTVVRMKADNPGAAHFHCHILPHLVMGMGFVVQVG 543
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BLAST of Ggra6239.t1 vs. uniprot
Match: A0A059BL49 (Uncharacterized protein n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059BL49_EUCGR)

HSP 1 Score: 74.7 bits (182), Expect = 6.210e-12
Identity = 39/100 (39.00%), Postives = 52/100 (52.00%), Query Frame = 0 
Query:   47 IDWVFRKTMALS-RDDEIHPWHLYLHNFWVLGYGEYQTTWNKSSIKTYNTRRAVSRNRAMLYPGFWTVMPMKAYNPDAAYFQCHILPHLVMGMGFVVKSG 145
            +D + +    LS    EIHPWHLY H+FWVLGYG+ + T  +   K  N      RN A ++P  W+ +   A  P    F CH  PHL MG+G +   G
Sbjct:  264 VDIILQNANMLSVNKSEIHPWHLYGHDFWVLGYGKGKFT-AEDGDKRLNLENPPLRNTAEIFPYAWSALRFVADTPGVWAFHCHFEPHLHMGIGVLFAEG 362
The following BLAST results are available for this feature:
BLAST of Ggra6239.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IF363.810e-5065.12L-ascorbate oxidase n=1 Tax=Gracilariopsis chorda ... [more]
A0A059BL496.210e-1239.00Uncharacterized protein n=1 Tax=Eucalyptus grandis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011706Multicopper oxidase, C-terminalPFAMPF07731Cu-oxidase_2coord: 28..143
e-value: 1.3E-22
score: 80.0
IPR008972CupredoxinGENE3D2.60.40.420coord: 2..161
e-value: 9.2E-30
score: 105.8
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 36..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR11709:SF394PLANT L-ASCORBATE OXIDASEcoord: 28..151
IPR045087Multicopper oxidasePANTHERPTHR11709MULTI-COPPER OXIDASEcoord: 28..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:120360..121526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6239.t1Ggra6239.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 120360..121526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6239.t1 ID=Ggra6239.t1|Name=Ggra6239.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=239bp
MVTDARPSLPLKKEDQYSTSRSLSKAGLSESAKEGTQVVKAKKDEVIDWV
FRKTMALSRDDEIHPWHLYLHNFWVLGYGEYQTTWNKSSIKTYNTRRAVS
RNRAMLYPGFWTVMPMKAYNPDAAYFQCHILPHLVMGMGFVVKSGTRTTS
LTLQLCSRKRKVIELLAYVLESAVLAHLRSDILIRDVQLDISGRCMRGRR
AGVDSERVATRCSWTKERRISAERRSGARRQAGRPQRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011706Cu-oxidase_C
IPR008972Cupredoxin
IPR045087Cu-oxidase_fam